data_7L4U
#
_model_server_result.job_id            xkT-KuVWVdtjGWUKLALPnA 
_model_server_result.datetime_utc      '2024-11-21 23:47:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7l4u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7L4U 
#
_exptl.entry_id    7L4U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              382.857 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5S)-5-(3-{4-[(2-chloro-4-fluorophenoxy)methyl]piperidin-1-yl}-3-oxopropyl)pyrrolidin-2-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7L4U 
_cell.length_a            92.528 
_cell.length_b            127.453 
_cell.length_c            135.911 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7L4U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C19 H24 Cl F N2 O3' 
_chem_comp.formula_weight    382.857 
_chem_comp.id                XP7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5S)-5-(3-{4-[(2-chloro-4-fluorophenoxy)methyl]piperidin-1-yl}-3-oxopropyl)pyrrolidin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 XP7 doub 376 n y 
C2 C5 XP7 sing 377 n y 
F25 C5 XP7 sing 378 n n 
C1 C4 XP7 sing 379 n y 
C5 C3 XP7 doub 380 n y 
C11 C13 XP7 sing 381 n n 
C11 C15 XP7 sing 382 n n 
C18 O24 XP7 sing 383 n n 
C18 C15 XP7 sing 384 n n 
C4 O24 XP7 sing 385 n n 
C4 C6 XP7 doub 386 n y 
C3 C6 XP7 sing 387 n y 
C13 N21 XP7 sing 388 n n 
C15 C12 XP7 sing 389 n n 
C6 CL26 XP7 sing 390 n n 
C9 C10 XP7 sing 391 n n 
C9 C7 XP7 sing 392 n n 
C10 C16 XP7 sing 393 n n 
C16 N20 XP7 sing 394 n n 
C16 C19 XP7 sing 395 n n 
C17 C19 XP7 sing 396 n n 
C17 C8 XP7 sing 397 n n 
N21 C8 XP7 sing 398 n n 
N21 C14 XP7 sing 399 n n 
C7 N20 XP7 sing 400 n n 
C7 O22 XP7 doub 401 n n 
C12 C14 XP7 sing 402 n n 
C8 O23 XP7 doub 403 n n 
C10 H1 XP7 sing 404 n n 
C10 H2 XP7 sing 405 n n 
C13 H3 XP7 sing 406 n n 
C13 H4 XP7 sing 407 n n 
C15 H5 XP7 sing 408 n n 
C17 H6 XP7 sing 409 n n 
C17 H7 XP7 sing 410 n n 
C1 H8 XP7 sing 411 n n 
C2 H9 XP7 sing 412 n n 
C3 H10 XP7 sing 413 n n 
C9 H11 XP7 sing 414 n n 
C9 H12 XP7 sing 415 n n 
C11 H13 XP7 sing 416 n n 
C11 H14 XP7 sing 417 n n 
C12 H15 XP7 sing 418 n n 
C12 H16 XP7 sing 419 n n 
C14 H17 XP7 sing 420 n n 
C14 H18 XP7 sing 421 n n 
C16 H19 XP7 sing 422 n n 
C18 H20 XP7 sing 423 n n 
C18 H21 XP7 sing 424 n n 
C19 H22 XP7 sing 425 n n 
C19 H23 XP7 sing 426 n n 
N20 H24 XP7 sing 427 n n 
#
_atom_sites.entry_id                     7L4U 
_atom_sites.fract_transf_matrix[1][1]    0.010808 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007846 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007358 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 XP7 A 1 401 301 XP7 LIG . 
D 3 CL A 1 402 298 CL CL . 
E 2 XP7 B 1 401 301 XP7 LIG . 
F 4 HOH A 1 501 133 HOH HOH . 
F 4 HOH A 2 502 94 HOH HOH . 
F 4 HOH A 3 503 128 HOH HOH . 
F 4 HOH A 4 504 6 HOH HOH . 
F 4 HOH A 5 505 86 HOH HOH . 
F 4 HOH A 6 506 83 HOH HOH . 
F 4 HOH A 7 507 132 HOH HOH . 
F 4 HOH A 8 508 123 HOH HOH . 
F 4 HOH A 9 509 114 HOH HOH . 
F 4 HOH A 10 510 152 HOH HOH . 
F 4 HOH A 11 511 130 HOH HOH . 
F 4 HOH A 12 512 139 HOH HOH . 
F 4 HOH A 13 513 129 HOH HOH . 
F 4 HOH A 14 514 17 HOH HOH . 
F 4 HOH A 15 515 23 HOH HOH . 
F 4 HOH A 16 516 102 HOH HOH . 
F 4 HOH A 17 517 151 HOH HOH . 
F 4 HOH A 18 518 107 HOH HOH . 
F 4 HOH A 19 519 72 HOH HOH . 
F 4 HOH A 20 520 31 HOH HOH . 
F 4 HOH A 21 521 135 HOH HOH . 
F 4 HOH A 22 522 110 HOH HOH . 
F 4 HOH A 23 523 28 HOH HOH . 
F 4 HOH A 24 524 35 HOH HOH . 
F 4 HOH A 25 525 154 HOH HOH . 
F 4 HOH A 26 526 22 HOH HOH . 
F 4 HOH A 27 527 24 HOH HOH . 
F 4 HOH A 28 528 19 HOH HOH . 
F 4 HOH A 29 529 18 HOH HOH . 
F 4 HOH A 30 530 134 HOH HOH . 
F 4 HOH A 31 531 20 HOH HOH . 
F 4 HOH A 32 532 131 HOH HOH . 
F 4 HOH A 33 533 62 HOH HOH . 
F 4 HOH A 34 534 26 HOH HOH . 
F 4 HOH A 35 535 160 HOH HOH . 
F 4 HOH A 36 536 68 HOH HOH . 
F 4 HOH A 37 537 30 HOH HOH . 
F 4 HOH A 38 538 147 HOH HOH . 
F 4 HOH A 39 539 37 HOH HOH . 
F 4 HOH A 40 540 63 HOH HOH . 
F 4 HOH A 41 541 70 HOH HOH . 
F 4 HOH A 42 542 48 HOH HOH . 
F 4 HOH A 43 543 155 HOH HOH . 
F 4 HOH A 44 544 33 HOH HOH . 
F 4 HOH A 45 545 158 HOH HOH . 
F 4 HOH A 46 546 52 HOH HOH . 
F 4 HOH A 47 547 39 HOH HOH . 
F 4 HOH A 48 548 113 HOH HOH . 
F 4 HOH A 49 549 106 HOH HOH . 
F 4 HOH A 50 550 118 HOH HOH . 
F 4 HOH A 51 551 120 HOH HOH . 
F 4 HOH A 52 552 56 HOH HOH . 
F 4 HOH A 53 553 38 HOH HOH . 
F 4 HOH A 54 554 119 HOH HOH . 
F 4 HOH A 55 555 121 HOH HOH . 
F 4 HOH A 56 556 150 HOH HOH . 
F 4 HOH A 57 557 95 HOH HOH . 
F 4 HOH A 58 558 50 HOH HOH . 
F 4 HOH A 59 559 36 HOH HOH . 
F 4 HOH A 60 560 115 HOH HOH . 
F 4 HOH A 61 561 53 HOH HOH . 
F 4 HOH A 62 562 149 HOH HOH . 
F 4 HOH A 63 563 99 HOH HOH . 
F 4 HOH A 64 564 144 HOH HOH . 
F 4 HOH A 65 565 44 HOH HOH . 
F 4 HOH A 66 566 64 HOH HOH . 
F 4 HOH A 67 567 47 HOH HOH . 
F 4 HOH A 68 568 51 HOH HOH . 
F 4 HOH A 69 569 7 HOH HOH . 
F 4 HOH A 70 570 146 HOH HOH . 
F 4 HOH A 71 571 104 HOH HOH . 
F 4 HOH A 72 572 92 HOH HOH . 
F 4 HOH A 73 573 145 HOH HOH . 
F 4 HOH A 74 574 111 HOH HOH . 
F 4 HOH A 75 575 78 HOH HOH . 
F 4 HOH A 76 576 136 HOH HOH . 
F 4 HOH A 77 577 67 HOH HOH . 
F 4 HOH A 78 578 65 HOH HOH . 
F 4 HOH A 79 579 117 HOH HOH . 
F 4 HOH A 80 580 143 HOH HOH . 
F 4 HOH A 81 581 98 HOH HOH . 
F 4 HOH A 82 582 79 HOH HOH . 
F 4 HOH A 83 583 76 HOH HOH . 
F 4 HOH A 84 584 141 HOH HOH . 
F 4 HOH A 85 585 46 HOH HOH . 
F 4 HOH A 86 586 80 HOH HOH . 
F 4 HOH A 87 587 88 HOH HOH . 
F 4 HOH A 88 588 157 HOH HOH . 
F 4 HOH A 89 589 159 HOH HOH . 
F 4 HOH A 90 590 101 HOH HOH . 
F 4 HOH A 91 591 112 HOH HOH . 
F 4 HOH A 92 592 103 HOH HOH . 
F 4 HOH A 93 593 57 HOH HOH . 
F 4 HOH A 94 594 100 HOH HOH . 
G 4 HOH B 1 501 137 HOH HOH . 
G 4 HOH B 2 502 153 HOH HOH . 
G 4 HOH B 3 503 29 HOH HOH . 
G 4 HOH B 4 504 140 HOH HOH . 
G 4 HOH B 5 505 12 HOH HOH . 
G 4 HOH B 6 506 84 HOH HOH . 
G 4 HOH B 7 507 82 HOH HOH . 
G 4 HOH B 8 508 40 HOH HOH . 
G 4 HOH B 9 509 138 HOH HOH . 
G 4 HOH B 10 510 27 HOH HOH . 
G 4 HOH B 11 511 15 HOH HOH . 
G 4 HOH B 12 512 1 HOH HOH . 
G 4 HOH B 13 513 10 HOH HOH . 
G 4 HOH B 14 514 127 HOH HOH . 
G 4 HOH B 15 515 21 HOH HOH . 
G 4 HOH B 16 516 11 HOH HOH . 
G 4 HOH B 17 517 3 HOH HOH . 
G 4 HOH B 18 518 25 HOH HOH . 
G 4 HOH B 19 519 43 HOH HOH . 
G 4 HOH B 20 520 59 HOH HOH . 
G 4 HOH B 21 521 87 HOH HOH . 
G 4 HOH B 22 522 42 HOH HOH . 
G 4 HOH B 23 523 34 HOH HOH . 
G 4 HOH B 24 524 4 HOH HOH . 
G 4 HOH B 25 525 90 HOH HOH . 
G 4 HOH B 26 526 32 HOH HOH . 
G 4 HOH B 27 527 69 HOH HOH . 
G 4 HOH B 28 528 66 HOH HOH . 
G 4 HOH B 29 529 124 HOH HOH . 
G 4 HOH B 30 530 81 HOH HOH . 
G 4 HOH B 31 531 91 HOH HOH . 
G 4 HOH B 32 532 109 HOH HOH . 
G 4 HOH B 33 533 9 HOH HOH . 
G 4 HOH B 34 534 58 HOH HOH . 
G 4 HOH B 35 535 74 HOH HOH . 
G 4 HOH B 36 536 108 HOH HOH . 
G 4 HOH B 37 537 73 HOH HOH . 
G 4 HOH B 38 538 14 HOH HOH . 
G 4 HOH B 39 539 2 HOH HOH . 
G 4 HOH B 40 540 71 HOH HOH . 
G 4 HOH B 41 541 61 HOH HOH . 
G 4 HOH B 42 542 126 HOH HOH . 
G 4 HOH B 43 543 60 HOH HOH . 
G 4 HOH B 44 544 41 HOH HOH . 
G 4 HOH B 45 545 116 HOH HOH . 
G 4 HOH B 46 546 96 HOH HOH . 
G 4 HOH B 47 547 45 HOH HOH . 
G 4 HOH B 48 548 156 HOH HOH . 
G 4 HOH B 49 549 77 HOH HOH . 
G 4 HOH B 50 550 5 HOH HOH . 
G 4 HOH B 51 551 105 HOH HOH . 
G 4 HOH B 52 552 55 HOH HOH . 
G 4 HOH B 53 553 142 HOH HOH . 
G 4 HOH B 54 554 122 HOH HOH . 
G 4 HOH B 55 555 93 HOH HOH . 
G 4 HOH B 56 556 16 HOH HOH . 
G 4 HOH B 57 557 13 HOH HOH . 
G 4 HOH B 58 558 97 HOH HOH . 
G 4 HOH B 59 559 85 HOH HOH . 
G 4 HOH B 60 560 54 HOH HOH . 
G 4 HOH B 61 561 49 HOH HOH . 
G 4 HOH B 62 562 75 HOH HOH . 
G 4 HOH B 63 563 125 HOH HOH . 
G 4 HOH B 64 564 148 HOH HOH . 
G 4 HOH B 65 565 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 XP7 . . . C 2 28.618 116.027 280.01 1 64.26 ? C4 XP7 401 A 1 
HETATM 2 C C5 XP7 . . . C 2 30.886 117.355 279.208 1 80.7 ? C5 XP7 401 A 1 
HETATM 3 C C6 XP7 . . . C 2 29.837 115.812 280.616 1 69.66 ? C6 XP7 401 A 1 
HETATM 4 C C7 XP7 . . . C 2 15.628 115.286 281.886 1 43.01 ? C7 XP7 401 A 1 
HETATM 5 C C8 XP7 . . . C 2 21.6 115.858 282.538 1 45.17 ? C8 XP7 401 A 1 
HETATM 6 C C10 XP7 . . . C 2 17.284 116.786 281.196 1 41.86 ? C10 XP7 401 A 1 
HETATM 7 C C13 XP7 . . . C 2 22.647 115.034 280.519 1 47.89 ? C13 XP7 401 A 1 
HETATM 8 C C15 XP7 . . . C 2 25.163 115.124 280.547 1 51.53 ? C15 XP7 401 A 1 
HETATM 9 C C17 XP7 . . . C 2 20.37 116.014 281.677 1 44.06 ? C17 XP7 401 A 1 
HETATM 10 C C1 XP7 . . . C 2 28.523 116.92 278.974 1 71.85 ? C1 XP7 401 A 1 
HETATM 11 C C2 XP7 . . . C 2 29.675 117.575 278.588 1 78.84 ? C2 XP7 401 A 1 
HETATM 12 C C3 XP7 . . . C 2 30.99 116.458 280.24 1 76.1 ? C3 XP7 401 A 1 
HETATM 13 C C9 XP7 . . . C 2 15.8 116.566 281.091 1 39.84 ? C9 XP7 401 A 1 
HETATM 14 C C11 XP7 . . . C 2 23.884 115.488 279.798 1 48.25 ? C11 XP7 401 A 1 
HETATM 15 C C12 XP7 . . . C 2 25.134 115.677 281.957 1 50.65 ? C12 XP7 401 A 1 
HETATM 16 C C14 XP7 . . . C 2 23.874 115.345 282.684 1 49.21 ? C14 XP7 401 A 1 
HETATM 17 C C16 XP7 . . . C 2 17.934 115.419 281.451 1 44.87 ? C16 XP7 401 A 1 
HETATM 18 C C18 XP7 . . . C 2 26.345 115.852 279.841 1 51.84 ? C18 XP7 401 A 1 
HETATM 19 C C19 XP7 . . . C 2 19.158 115.473 282.392 1 43.98 ? C19 XP7 401 A 1 
HETATM 20 N N20 XP7 . . . C 2 16.855 114.655 282.017 1 42.11 ? N20 XP7 401 A 1 
HETATM 21 N N21 XP7 . . . C 2 22.694 115.517 281.878 1 48.08 ? N21 XP7 401 A 1 
HETATM 22 O O22 XP7 . . . C 2 14.559 114.905 282.354 1 43.29 ? O22 XP7 401 A 1 
HETATM 23 O O23 XP7 . . . C 2 21.657 116.089 283.739 1 42.39 ? O23 XP7 401 A 1 
HETATM 24 O O24 XP7 . . . C 2 27.526 115.338 280.462 1 54.47 ? O24 XP7 401 A 1 
HETATM 25 F F25 XP7 . . . C 2 31.975 118.017 278.802 1 86.68 ? F25 XP7 401 A 1 
HETATM 26 CL CL26 XP7 . . . C 2 29.97 114.707 281.891 1 70.37 ? CL26 XP7 401 A 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           26 
#