data_7L4W
#
_model_server_result.job_id            '_SHv9eLU2vsqNFpnxH-NSg' 
_model_server_result.datetime_utc      '2024-11-22 06:30:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7l4w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7L4W 
#
_exptl.entry_id    7L4W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              396.84 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2s,4R)-2-{4-[(2-chloro-4-fluorophenoxy)methyl]piperidine-1-carbonyl}-7-oxa-5-azaspiro[3.4]octan-6-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7L4W 
_cell.length_a            92.623 
_cell.length_b            127.215 
_cell.length_c            135.961 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7L4W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C19 H22 Cl F N2 O4' 
_chem_comp.formula_weight    396.84 
_chem_comp.id                XOV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2s,4R)-2-{4-[(2-chloro-4-fluorophenoxy)methyl]piperidine-1-carbonyl}-7-oxa-5-azaspiro[3.4]octan-6-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F26 C5 XOV sing 376 n n 
C3 C5 XOV doub 377 n y 
C3 C6 XOV sing 378 n y 
C5 C2 XOV sing 379 n y 
CL27 C6 XOV sing 380 n n 
C6 C4 XOV doub 381 n y 
C2 C1 XOV doub 382 n y 
C4 C1 XOV sing 383 n y 
C4 O25 XOV sing 384 n n 
O25 C19 XOV sing 385 n n 
C10 C14 XOV sing 386 n n 
C10 C17 XOV sing 387 n n 
C19 C17 XOV sing 388 n n 
C14 N21 XOV sing 389 n n 
C17 C9 XOV sing 390 n n 
O23 C8 XOV doub 391 n n 
N21 C8 XOV sing 392 n n 
N21 C13 XOV sing 393 n n 
C9 C13 XOV sing 394 n n 
C8 C16 XOV sing 395 n n 
C16 C12 XOV sing 396 n n 
C16 C11 XOV sing 397 n n 
C12 C18 XOV sing 398 n n 
C11 C18 XOV sing 399 n n 
C18 C15 XOV sing 400 n n 
C18 N20 XOV sing 401 n n 
C15 O24 XOV sing 402 n n 
N20 C7 XOV sing 403 n n 
O24 C7 XOV sing 404 n n 
C7 O22 XOV doub 405 n n 
C10 H1 XOV sing 406 n n 
C10 H2 XOV sing 407 n n 
C13 H3 XOV sing 408 n n 
C13 H4 XOV sing 409 n n 
C15 H5 XOV sing 410 n n 
C15 H6 XOV sing 411 n n 
C17 H7 XOV sing 412 n n 
C1 H8 XOV sing 413 n n 
C2 H9 XOV sing 414 n n 
C3 H10 XOV sing 415 n n 
C9 H11 XOV sing 416 n n 
C9 H12 XOV sing 417 n n 
C11 H13 XOV sing 418 n n 
C11 H14 XOV sing 419 n n 
C12 H15 XOV sing 420 n n 
C12 H16 XOV sing 421 n n 
C14 H17 XOV sing 422 n n 
C14 H18 XOV sing 423 n n 
C16 H19 XOV sing 424 n n 
C19 H20 XOV sing 425 n n 
C19 H21 XOV sing 426 n n 
N20 H22 XOV sing 427 n n 
#
_atom_sites.entry_id                     7L4W 
_atom_sites.fract_transf_matrix[1][1]    0.010796 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007861 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007355 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 XOV A 1 401 301 XOV LIG . 
D 2 XOV B 1 401 301 XOV LIG . 
E 3 HOH A 1 501 84 HOH HOH . 
E 3 HOH A 2 502 40 HOH HOH . 
E 3 HOH A 3 503 11 HOH HOH . 
E 3 HOH A 4 504 23 HOH HOH . 
E 3 HOH A 5 505 29 HOH HOH . 
E 3 HOH A 6 506 51 HOH HOH . 
E 3 HOH A 7 507 16 HOH HOH . 
E 3 HOH A 8 508 63 HOH HOH . 
E 3 HOH A 9 509 28 HOH HOH . 
E 3 HOH A 10 510 43 HOH HOH . 
E 3 HOH A 11 511 85 HOH HOH . 
E 3 HOH A 12 512 66 HOH HOH . 
E 3 HOH A 13 513 7 HOH HOH . 
E 3 HOH A 14 514 52 HOH HOH . 
E 3 HOH A 15 515 121 HOH HOH . 
E 3 HOH A 16 516 68 HOH HOH . 
E 3 HOH A 17 517 122 HOH HOH . 
E 3 HOH A 18 518 19 HOH HOH . 
E 3 HOH A 19 519 25 HOH HOH . 
E 3 HOH A 20 520 83 HOH HOH . 
E 3 HOH A 21 521 2 HOH HOH . 
E 3 HOH A 22 522 6 HOH HOH . 
E 3 HOH A 23 523 55 HOH HOH . 
E 3 HOH A 24 524 116 HOH HOH . 
E 3 HOH A 25 525 35 HOH HOH . 
E 3 HOH A 26 526 59 HOH HOH . 
E 3 HOH A 27 527 115 HOH HOH . 
E 3 HOH A 28 528 14 HOH HOH . 
E 3 HOH A 29 529 96 HOH HOH . 
E 3 HOH A 30 530 67 HOH HOH . 
E 3 HOH A 31 531 87 HOH HOH . 
E 3 HOH A 32 532 9 HOH HOH . 
E 3 HOH A 33 533 75 HOH HOH . 
E 3 HOH A 34 534 50 HOH HOH . 
E 3 HOH A 35 535 41 HOH HOH . 
E 3 HOH A 36 536 21 HOH HOH . 
E 3 HOH A 37 537 24 HOH HOH . 
E 3 HOH A 38 538 57 HOH HOH . 
E 3 HOH A 39 539 119 HOH HOH . 
E 3 HOH A 40 540 120 HOH HOH . 
E 3 HOH A 41 541 69 HOH HOH . 
E 3 HOH A 42 542 18 HOH HOH . 
E 3 HOH A 43 543 118 HOH HOH . 
E 3 HOH A 44 544 117 HOH HOH . 
E 3 HOH A 45 545 10 HOH HOH . 
E 3 HOH A 46 546 95 HOH HOH . 
E 3 HOH A 47 547 126 HOH HOH . 
E 3 HOH A 48 548 92 HOH HOH . 
E 3 HOH A 49 549 90 HOH HOH . 
E 3 HOH A 50 550 91 HOH HOH . 
E 3 HOH A 51 551 86 HOH HOH . 
E 3 HOH A 52 552 94 HOH HOH . 
E 3 HOH A 53 553 89 HOH HOH . 
E 3 HOH A 54 554 80 HOH HOH . 
E 3 HOH A 55 555 81 HOH HOH . 
E 3 HOH A 56 556 93 HOH HOH . 
E 3 HOH A 57 557 82 HOH HOH . 
F 3 HOH B 1 501 123 HOH HOH . 
F 3 HOH B 2 502 113 HOH HOH . 
F 3 HOH B 3 503 103 HOH HOH . 
F 3 HOH B 4 504 98 HOH HOH . 
F 3 HOH B 5 505 64 HOH HOH . 
F 3 HOH B 6 506 56 HOH HOH . 
F 3 HOH B 7 507 20 HOH HOH . 
F 3 HOH B 8 508 3 HOH HOH . 
F 3 HOH B 9 509 8 HOH HOH . 
F 3 HOH B 10 510 105 HOH HOH . 
F 3 HOH B 11 511 61 HOH HOH . 
F 3 HOH B 12 512 74 HOH HOH . 
F 3 HOH B 13 513 27 HOH HOH . 
F 3 HOH B 14 514 33 HOH HOH . 
F 3 HOH B 15 515 76 HOH HOH . 
F 3 HOH B 16 516 54 HOH HOH . 
F 3 HOH B 17 517 26 HOH HOH . 
F 3 HOH B 18 518 15 HOH HOH . 
F 3 HOH B 19 519 49 HOH HOH . 
F 3 HOH B 20 520 34 HOH HOH . 
F 3 HOH B 21 521 112 HOH HOH . 
F 3 HOH B 22 522 4 HOH HOH . 
F 3 HOH B 23 523 5 HOH HOH . 
F 3 HOH B 24 524 39 HOH HOH . 
F 3 HOH B 25 525 36 HOH HOH . 
F 3 HOH B 26 526 31 HOH HOH . 
F 3 HOH B 27 527 13 HOH HOH . 
F 3 HOH B 28 528 45 HOH HOH . 
F 3 HOH B 29 529 53 HOH HOH . 
F 3 HOH B 30 530 101 HOH HOH . 
F 3 HOH B 31 531 12 HOH HOH . 
F 3 HOH B 32 532 60 HOH HOH . 
F 3 HOH B 33 533 1 HOH HOH . 
F 3 HOH B 34 534 47 HOH HOH . 
F 3 HOH B 35 535 124 HOH HOH . 
F 3 HOH B 36 536 62 HOH HOH . 
F 3 HOH B 37 537 30 HOH HOH . 
F 3 HOH B 38 538 17 HOH HOH . 
F 3 HOH B 39 539 104 HOH HOH . 
F 3 HOH B 40 540 71 HOH HOH . 
F 3 HOH B 41 541 72 HOH HOH . 
F 3 HOH B 42 542 22 HOH HOH . 
F 3 HOH B 43 543 99 HOH HOH . 
F 3 HOH B 44 544 46 HOH HOH . 
F 3 HOH B 45 545 73 HOH HOH . 
F 3 HOH B 46 546 38 HOH HOH . 
F 3 HOH B 47 547 44 HOH HOH . 
F 3 HOH B 48 548 114 HOH HOH . 
F 3 HOH B 49 549 70 HOH HOH . 
F 3 HOH B 50 550 42 HOH HOH . 
F 3 HOH B 51 551 106 HOH HOH . 
F 3 HOH B 52 552 32 HOH HOH . 
F 3 HOH B 53 553 37 HOH HOH . 
F 3 HOH B 54 554 100 HOH HOH . 
F 3 HOH B 55 555 110 HOH HOH . 
F 3 HOH B 56 556 127 HOH HOH . 
F 3 HOH B 57 557 78 HOH HOH . 
F 3 HOH B 58 558 131 HOH HOH . 
F 3 HOH B 59 559 108 HOH HOH . 
F 3 HOH B 60 560 58 HOH HOH . 
F 3 HOH B 61 561 97 HOH HOH . 
F 3 HOH B 62 562 77 HOH HOH . 
F 3 HOH B 63 563 65 HOH HOH . 
F 3 HOH B 64 564 130 HOH HOH . 
F 3 HOH B 65 565 102 HOH HOH . 
F 3 HOH B 66 566 109 HOH HOH . 
F 3 HOH B 67 567 107 HOH HOH . 
F 3 HOH B 68 568 48 HOH HOH . 
F 3 HOH B 69 569 125 HOH HOH . 
F 3 HOH B 70 570 129 HOH HOH . 
F 3 HOH B 71 571 79 HOH HOH . 
F 3 HOH B 72 572 88 HOH HOH . 
F 3 HOH B 73 573 111 HOH HOH . 
F 3 HOH B 74 574 128 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 XOV . . . C 2 -34.165 -10.498 -53.683 1 64.9 ? C4 XOV 401 A 1 
HETATM 2 C C5 XOV . . . C 2 -35.779 -9.318 -55.656 1 70.82 ? C5 XOV 401 A 1 
HETATM 3 C C6 XOV . . . C 2 -34.034 -10.85 -55.033 1 65.44 ? C6 XOV 401 A 1 
HETATM 4 C C7 XOV . . . C 2 -26.563 -10.399 -43.369 1 51.86 ? C7 XOV 401 A 1 
HETATM 5 C C8 XOV . . . C 2 -28.315 -10.3 -48.884 1 50.12 ? C8 XOV 401 A 1 
HETATM 6 C C10 XOV . . . C 2 -30.772 -10.813 -51.524 1 54.87 ? C10 XOV 401 A 1 
HETATM 7 C C13 XOV . . . C 2 -30.72 -10.979 -48.59 1 52.97 ? C13 XOV 401 A 1 
HETATM 8 C C15 XOV . . . C 2 -28.142 -9.059 -44.497 1 47.99 ? C15 XOV 401 A 1 
HETATM 9 C C17 XOV . . . C 2 -32.09 -10.989 -50.738 1 57.51 ? C17 XOV 401 A 1 
HETATM 10 C C1 XOV . . . C 2 -35.134 -9.556 -53.315 1 65.72 ? C1 XOV 401 A 1 
HETATM 11 C C2 XOV . . . C 2 -35.93 -8.973 -54.304 1 68.95 ? C2 XOV 401 A 1 
HETATM 12 C C3 XOV . . . C 2 -34.827 -10.27 -56.026 1 67.81 ? C3 XOV 401 A 1 
HETATM 13 C C9 XOV . . . C 2 -31.96 -10.436 -49.305 1 56.83 ? C9 XOV 401 A 1 
HETATM 14 C C11 XOV . . . C 2 -28.836 -10.82 -46.27 1 49.42 ? C11 XOV 401 A 1 
HETATM 15 C C12 XOV . . . C 2 -26.985 -9.878 -46.718 1 46.9 ? C12 XOV 401 A 1 
HETATM 16 C C14 XOV . . . C 2 -29.536 -11.289 -50.77 1 52.45 ? C14 XOV 401 A 1 
HETATM 17 C C16 XOV . . . C 2 -28.361 -9.861 -47.419 1 48.16 ? C16 XOV 401 A 1 
HETATM 18 C C18 XOV . . . C 2 -27.724 -10.204 -45.398 1 48.87 ? C18 XOV 401 A 1 
HETATM 19 C C19 XOV . . . C 2 -33.236 -10.387 -51.515 1 58.46 ? C19 XOV 401 A 1 
HETATM 20 N N20 XOV . . . C 2 -26.971 -11.094 -44.49 1 48.64 ? N20 XOV 401 A 1 
HETATM 21 N N21 XOV . . . C 2 -29.515 -10.758 -49.403 1 52.31 ? N21 XOV 401 A 1 
HETATM 22 O O22 XOV . . . C 2 -25.778 -10.769 -42.498 1 48.78 ? O22 XOV 401 A 1 
HETATM 23 O O23 XOV . . . C 2 -27.299 -10.264 -49.565 1 47.97 ? O23 XOV 401 A 1 
HETATM 24 O O24 XOV . . . C 2 -27.159 -9.128 -43.442 1 51.22 ? O24 XOV 401 A 1 
HETATM 25 O O25 XOV . . . C 2 -33.324 -11.112 -52.75 1 63.23 ? O25 XOV 401 A 1 
HETATM 26 F F26 XOV . . . C 2 -36.547 -8.74 -56.617 1 74.47 ? F26 XOV 401 A 1 
HETATM 27 CL CL27 XOV . . . C 2 -32.873 -11.998 -55.543 1 65.95 ? CL27 XOV 401 A 1 
#
_model_server_stats.io_time_ms              86 
_model_server_stats.parse_time_ms           56 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#