data_7L6D # _model_server_result.job_id nRJeRgZhryiWjcvKtoNhAg _model_server_result.datetime_utc '2024-11-05 06:45:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l6d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 7L6D # _exptl.entry_id 7L6D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.81 _cell.angle_gamma 90 _cell.entry_id 7L6D _cell.length_a 84.26 _cell.length_b 35.56 _cell.length_c 47.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 133 n n C1 C2 EDO sing 134 n n C1 H11 EDO sing 135 n n C1 H12 EDO sing 136 n n O1 HO1 EDO sing 137 n n C2 O2 EDO sing 138 n n C2 H21 EDO sing 139 n n C2 H22 EDO sing 140 n n O2 HO2 EDO sing 141 n n # _atom_sites.entry_id 7L6D _atom_sites.fract_transf_matrix[1][1] 0.011868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006526 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BMF A 1 501 1 BMF BMF . C 3 EDO A 1 502 1 EDO EDO . D 3 EDO A 1 503 2 EDO EDO . E 3 EDO A 1 504 3 EDO EDO . F 3 EDO A 1 505 4 EDO EDO . G 3 EDO A 1 506 5 EDO EDO . H 3 EDO A 1 507 6 EDO EDO . I 3 EDO A 1 508 7 EDO EDO . J 3 EDO A 1 509 8 EDO EDO . K 4 SO4 A 1 510 1 SO4 SO4 . L 5 HOH A 1 601 89 HOH HOH . L 5 HOH A 2 602 56 HOH HOH . L 5 HOH A 3 603 65 HOH HOH . L 5 HOH A 4 604 84 HOH HOH . L 5 HOH A 5 605 99 HOH HOH . L 5 HOH A 6 606 28 HOH HOH . L 5 HOH A 7 607 81 HOH HOH . L 5 HOH A 8 608 72 HOH HOH . L 5 HOH A 9 609 75 HOH HOH . L 5 HOH A 10 610 61 HOH HOH . L 5 HOH A 11 611 15 HOH HOH . L 5 HOH A 12 612 6 HOH HOH . L 5 HOH A 13 613 68 HOH HOH . L 5 HOH A 14 614 70 HOH HOH . L 5 HOH A 15 615 35 HOH HOH . L 5 HOH A 16 616 50 HOH HOH . L 5 HOH A 17 617 78 HOH HOH . L 5 HOH A 18 618 17 HOH HOH . L 5 HOH A 19 619 11 HOH HOH . L 5 HOH A 20 620 21 HOH HOH . L 5 HOH A 21 621 107 HOH HOH . L 5 HOH A 22 622 12 HOH HOH . L 5 HOH A 23 623 82 HOH HOH . L 5 HOH A 24 624 19 HOH HOH . L 5 HOH A 25 625 7 HOH HOH . L 5 HOH A 26 626 80 HOH HOH . L 5 HOH A 27 627 3 HOH HOH . L 5 HOH A 28 628 9 HOH HOH . L 5 HOH A 29 629 45 HOH HOH . L 5 HOH A 30 630 38 HOH HOH . L 5 HOH A 31 631 30 HOH HOH . L 5 HOH A 32 632 104 HOH HOH . L 5 HOH A 33 633 24 HOH HOH . L 5 HOH A 34 634 55 HOH HOH . L 5 HOH A 35 635 54 HOH HOH . L 5 HOH A 36 636 69 HOH HOH . L 5 HOH A 37 637 90 HOH HOH . L 5 HOH A 38 638 25 HOH HOH . L 5 HOH A 39 639 2 HOH HOH . L 5 HOH A 40 640 41 HOH HOH . L 5 HOH A 41 641 87 HOH HOH . L 5 HOH A 42 642 37 HOH HOH . L 5 HOH A 43 643 18 HOH HOH . L 5 HOH A 44 644 47 HOH HOH . L 5 HOH A 45 645 67 HOH HOH . L 5 HOH A 46 646 77 HOH HOH . L 5 HOH A 47 647 23 HOH HOH . L 5 HOH A 48 648 5 HOH HOH . L 5 HOH A 49 649 59 HOH HOH . L 5 HOH A 50 650 4 HOH HOH . L 5 HOH A 51 651 60 HOH HOH . L 5 HOH A 52 652 76 HOH HOH . L 5 HOH A 53 653 40 HOH HOH . L 5 HOH A 54 654 48 HOH HOH . L 5 HOH A 55 655 16 HOH HOH . L 5 HOH A 56 656 52 HOH HOH . L 5 HOH A 57 657 86 HOH HOH . L 5 HOH A 58 658 88 HOH HOH . L 5 HOH A 59 659 57 HOH HOH . L 5 HOH A 60 660 46 HOH HOH . L 5 HOH A 61 661 51 HOH HOH . L 5 HOH A 62 662 26 HOH HOH . L 5 HOH A 63 663 13 HOH HOH . L 5 HOH A 64 664 39 HOH HOH . L 5 HOH A 65 665 22 HOH HOH . L 5 HOH A 66 666 85 HOH HOH . L 5 HOH A 67 667 53 HOH HOH . L 5 HOH A 68 668 101 HOH HOH . L 5 HOH A 69 669 29 HOH HOH . L 5 HOH A 70 670 31 HOH HOH . L 5 HOH A 71 671 14 HOH HOH . L 5 HOH A 72 672 62 HOH HOH . L 5 HOH A 73 673 93 HOH HOH . L 5 HOH A 74 674 100 HOH HOH . L 5 HOH A 75 675 58 HOH HOH . L 5 HOH A 76 676 71 HOH HOH . L 5 HOH A 77 677 34 HOH HOH . L 5 HOH A 78 678 79 HOH HOH . L 5 HOH A 79 679 94 HOH HOH . L 5 HOH A 80 680 95 HOH HOH . L 5 HOH A 81 681 102 HOH HOH . L 5 HOH A 82 682 1 HOH HOH . L 5 HOH A 83 683 96 HOH HOH . L 5 HOH A 84 684 91 HOH HOH . L 5 HOH A 85 685 103 HOH HOH . L 5 HOH A 86 686 106 HOH HOH . L 5 HOH A 87 687 64 HOH HOH . L 5 HOH A 88 688 33 HOH HOH . L 5 HOH A 89 689 43 HOH HOH . L 5 HOH A 90 690 32 HOH HOH . L 5 HOH A 91 691 92 HOH HOH . L 5 HOH A 92 692 36 HOH HOH . L 5 HOH A 93 693 73 HOH HOH . L 5 HOH A 94 694 27 HOH HOH . L 5 HOH A 95 695 74 HOH HOH . L 5 HOH A 96 696 97 HOH HOH . L 5 HOH A 97 697 105 HOH HOH . L 5 HOH A 98 698 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 10.972 -4.286 16.726 1 37.59 ? C1 EDO 504 A 1 HETATM 2 O O1 EDO . . . E 3 10.735 -3.799 18.052 1 40.38 ? O1 EDO 504 A 1 HETATM 3 C C2 EDO . . . E 3 9.752 -5.073 16.261 1 27.7 ? C2 EDO 504 A 1 HETATM 4 O O2 EDO . . . E 3 8.695 -4.171 15.929 1 30.59 ? O2 EDO 504 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #