data_7L97 # _model_server_result.job_id lg5aDWpNfDfQazyIQDDpEg _model_server_result.datetime_utc '2024-11-22 16:58:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":101}' # _entry.id 7L97 # _exptl.entry_id 7L97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.51 _cell.angle_gamma 90 _cell.entry_id 7L97 _cell.length_a 63.709 _cell.length_b 68.882 _cell.length_c 57.329 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 347 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc2 A NE2 HIS 88 A HIS 349 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc3 A OD1 ASP 99 A ASP 360 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc4 A OD2 ASP 99 A ASP 360 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc5 A NE2 HIS 101 A HIS 362 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc6 A SG CYS 141 A CYS 402 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 A NE2 HIS 147 A HIS 408 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc8 A NE2 HIS 149 A HIS 410 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7L97 _atom_sites.fract_transf_matrix[1][1] 0.015696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002349 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014518 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 501 1000 ZN ZN . D 3 ZN A 1 502 1001 ZN ZN . E 4 EDO A 1 503 2 EDO EDO . F 5 SO4 A 1 504 1 SO4 SO4 . G 5 SO4 A 1 505 2 SO4 SO4 . H 6 UNX A 1 506 1001 UNX UNX . I 4 EDO B 1 101 1 EDO EDO . J 6 UNX B 1 102 1002 UNX UNX . K 7 HOH A 1 601 15 HOH HOH . K 7 HOH A 2 602 57 HOH HOH . K 7 HOH A 3 603 11 HOH HOH . K 7 HOH A 4 604 4 HOH HOH . K 7 HOH A 5 605 2 HOH HOH . K 7 HOH A 6 606 52 HOH HOH . K 7 HOH A 7 607 45 HOH HOH . K 7 HOH A 8 608 14 HOH HOH . K 7 HOH A 9 609 24 HOH HOH . K 7 HOH A 10 610 39 HOH HOH . K 7 HOH A 11 611 17 HOH HOH . K 7 HOH A 12 612 1 HOH HOH . K 7 HOH A 13 613 3 HOH HOH . K 7 HOH A 14 614 8 HOH HOH . K 7 HOH A 15 615 25 HOH HOH . K 7 HOH A 16 616 6 HOH HOH . K 7 HOH A 17 617 54 HOH HOH . K 7 HOH A 18 618 44 HOH HOH . K 7 HOH A 19 619 22 HOH HOH . K 7 HOH A 20 620 55 HOH HOH . K 7 HOH A 21 621 28 HOH HOH . K 7 HOH A 22 622 12 HOH HOH . K 7 HOH A 23 623 58 HOH HOH . K 7 HOH A 24 624 9 HOH HOH . K 7 HOH A 25 625 62 HOH HOH . K 7 HOH A 26 626 13 HOH HOH . K 7 HOH A 27 627 35 HOH HOH . K 7 HOH A 28 628 47 HOH HOH . K 7 HOH A 29 629 40 HOH HOH . K 7 HOH A 30 630 31 HOH HOH . K 7 HOH A 31 631 42 HOH HOH . K 7 HOH A 32 632 27 HOH HOH . K 7 HOH A 33 633 26 HOH HOH . K 7 HOH A 34 634 16 HOH HOH . K 7 HOH A 35 635 59 HOH HOH . K 7 HOH A 36 636 5 HOH HOH . K 7 HOH A 37 637 63 HOH HOH . K 7 HOH A 38 638 38 HOH HOH . K 7 HOH A 39 639 33 HOH HOH . K 7 HOH A 40 640 21 HOH HOH . K 7 HOH A 41 641 43 HOH HOH . K 7 HOH A 42 642 10 HOH HOH . K 7 HOH A 43 643 23 HOH HOH . K 7 HOH A 44 644 46 HOH HOH . K 7 HOH A 45 645 18 HOH HOH . L 7 HOH B 1 201 53 HOH HOH . L 7 HOH B 2 202 60 HOH HOH . L 7 HOH B 3 203 49 HOH HOH . L 7 HOH B 4 204 32 HOH HOH . L 7 HOH B 5 205 36 HOH HOH . L 7 HOH B 6 206 34 HOH HOH . L 7 HOH B 7 207 7 HOH HOH . L 7 HOH B 8 208 20 HOH HOH . L 7 HOH B 9 209 50 HOH HOH . L 7 HOH B 10 210 29 HOH HOH . L 7 HOH B 11 211 30 HOH HOH . L 7 HOH B 12 212 51 HOH HOH . L 7 HOH B 13 213 19 HOH HOH . L 7 HOH B 14 214 61 HOH HOH . L 7 HOH B 15 215 56 HOH HOH . L 7 HOH B 16 216 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 4 13.044 -2.912 6.566 1 31.31 ? C1 EDO 101 B 1 HETATM 2 O O1 EDO . . . I 4 12.094 -2.826 5.513 1 32.38 ? O1 EDO 101 B 1 HETATM 3 C C2 EDO . . . I 4 12.518 -3.777 7.699 1 31.71 ? C2 EDO 101 B 1 HETATM 4 O O2 EDO . . . I 4 12.687 -5.149 7.337 1 30.86 ? O2 EDO 101 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #