data_7L9A # _model_server_result.job_id vfbGSIBQFC0lyCU5RcmkIg _model_server_result.datetime_utc '2024-11-23 04:14:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l9a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 7L9A # _exptl.entry_id 7L9A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7L9A _cell.length_a 56.47 _cell.length_b 56.47 _cell.length_c 191.901 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L9A _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 7L9A _atom_sites.fract_transf_matrix[1][1] 0.017709 _atom_sites.fract_transf_matrix[1][2] 0.010224 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XWP A 1 401 800 XWP CDD . D 3 BME A 1 402 1 BME BME . E 2 XWP B 1 401 800 XWP CDD . F 3 BME B 1 402 2 BME BME . G 4 HOH A 1 501 20 HOH HOH . G 4 HOH A 2 502 11 HOH HOH . G 4 HOH A 3 503 32 HOH HOH . G 4 HOH A 4 504 29 HOH HOH . G 4 HOH A 5 505 21 HOH HOH . G 4 HOH A 6 506 22 HOH HOH . G 4 HOH A 7 507 28 HOH HOH . G 4 HOH A 8 508 31 HOH HOH . G 4 HOH A 9 509 41 HOH HOH . G 4 HOH A 10 510 27 HOH HOH . G 4 HOH A 11 511 4 HOH HOH . G 4 HOH A 12 512 12 HOH HOH . G 4 HOH A 13 513 17 HOH HOH . G 4 HOH A 14 514 33 HOH HOH . G 4 HOH A 15 515 42 HOH HOH . G 4 HOH A 16 516 24 HOH HOH . G 4 HOH A 17 517 30 HOH HOH . G 4 HOH A 18 518 14 HOH HOH . G 4 HOH A 19 519 13 HOH HOH . G 4 HOH A 20 520 15 HOH HOH . G 4 HOH A 21 521 35 HOH HOH . H 4 HOH B 1 501 8 HOH HOH . H 4 HOH B 2 502 3 HOH HOH . H 4 HOH B 3 503 1 HOH HOH . H 4 HOH B 4 504 7 HOH HOH . H 4 HOH B 5 505 23 HOH HOH . H 4 HOH B 6 506 10 HOH HOH . H 4 HOH B 7 507 25 HOH HOH . H 4 HOH B 8 508 34 HOH HOH . H 4 HOH B 9 509 9 HOH HOH . H 4 HOH B 10 510 18 HOH HOH . H 4 HOH B 11 511 16 HOH HOH . H 4 HOH B 12 512 19 HOH HOH . H 4 HOH B 13 513 37 HOH HOH . H 4 HOH B 14 514 40 HOH HOH . H 4 HOH B 15 515 26 HOH HOH . H 4 HOH B 16 516 2 HOH HOH . H 4 HOH B 17 517 38 HOH HOH . H 4 HOH B 18 518 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 28.092 -16.907 -14.185 1 77.78 ? C1 BME 402 A 1 HETATM 2 C C2 BME . . . D 3 27.772 -16.728 -12.704 1 78.01 ? C2 BME 402 A 1 HETATM 3 O O1 BME . . . D 3 28.822 -15.8 -14.637 1 77.38 ? O1 BME 402 A 1 HETATM 4 S S2 BME . . . D 3 26.454 -15.487 -12.568 1 78.54 ? S2 BME 402 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #