data_7L9G
#
_model_server_result.job_id            Rj2L1bJ_IAklvKfHZoCSEQ 
_model_server_result.datetime_utc      '2024-11-28 08:13:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7l9g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    7L9G 
#
_exptl.entry_id    7L9G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7L9G 
_cell.length_a            52.53 
_cell.length_b            71.55 
_cell.length_c            32.13 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7L9G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7L9G 
_atom_sites.fract_transf_matrix[1][1]    0.019037 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013976 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031124 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 501 501 EDO EDO . 
C 2 EDO A 1 502 601 EDO EDO . 
D 3 R78 A 1 503 1 R78 R78 . 
E 4 CL A 1 504 1 CL CL . 
F 5 HOH A 1 601 128 HOH HOH . 
F 5 HOH A 2 602 168 HOH HOH . 
F 5 HOH A 3 603 84 HOH HOH . 
F 5 HOH A 4 604 179 HOH HOH . 
F 5 HOH A 5 605 1 HOH HOH . 
F 5 HOH A 6 606 91 HOH HOH . 
F 5 HOH A 7 607 27 HOH HOH . 
F 5 HOH A 8 608 12 HOH HOH . 
F 5 HOH A 9 609 185 HOH HOH . 
F 5 HOH A 10 610 75 HOH HOH . 
F 5 HOH A 11 611 95 HOH HOH . 
F 5 HOH A 12 612 39 HOH HOH . 
F 5 HOH A 13 613 80 HOH HOH . 
F 5 HOH A 14 614 20 HOH HOH . 
F 5 HOH A 15 615 68 HOH HOH . 
F 5 HOH A 16 616 162 HOH HOH . 
F 5 HOH A 17 617 7 HOH HOH . 
F 5 HOH A 18 618 134 HOH HOH . 
F 5 HOH A 19 619 122 HOH HOH . 
F 5 HOH A 20 620 121 HOH HOH . 
F 5 HOH A 21 621 6 HOH HOH . 
F 5 HOH A 22 622 69 HOH HOH . 
F 5 HOH A 23 623 87 HOH HOH . 
F 5 HOH A 24 624 38 HOH HOH . 
F 5 HOH A 25 625 54 HOH HOH . 
F 5 HOH A 26 626 100 HOH HOH . 
F 5 HOH A 27 627 105 HOH HOH . 
F 5 HOH A 28 628 16 HOH HOH . 
F 5 HOH A 29 629 3 HOH HOH . 
F 5 HOH A 30 630 11 HOH HOH . 
F 5 HOH A 31 631 17 HOH HOH . 
F 5 HOH A 32 632 25 HOH HOH . 
F 5 HOH A 33 633 47 HOH HOH . 
F 5 HOH A 34 634 124 HOH HOH . 
F 5 HOH A 35 635 94 HOH HOH . 
F 5 HOH A 36 636 51 HOH HOH . 
F 5 HOH A 37 637 140 HOH HOH . 
F 5 HOH A 38 638 5 HOH HOH . 
F 5 HOH A 39 639 120 HOH HOH . 
F 5 HOH A 40 640 60 HOH HOH . 
F 5 HOH A 41 641 175 HOH HOH . 
F 5 HOH A 42 642 56 HOH HOH . 
F 5 HOH A 43 643 132 HOH HOH . 
F 5 HOH A 44 644 67 HOH HOH . 
F 5 HOH A 45 645 86 HOH HOH . 
F 5 HOH A 46 646 117 HOH HOH . 
F 5 HOH A 47 647 13 HOH HOH . 
F 5 HOH A 48 648 197 HOH HOH . 
F 5 HOH A 49 649 76 HOH HOH . 
F 5 HOH A 50 650 89 HOH HOH . 
F 5 HOH A 51 651 28 HOH HOH . 
F 5 HOH A 52 652 44 HOH HOH . 
F 5 HOH A 53 653 167 HOH HOH . 
F 5 HOH A 54 654 32 HOH HOH . 
F 5 HOH A 55 655 133 HOH HOH . 
F 5 HOH A 56 656 22 HOH HOH . 
F 5 HOH A 57 657 8 HOH HOH . 
F 5 HOH A 58 658 21 HOH HOH . 
F 5 HOH A 59 659 14 HOH HOH . 
F 5 HOH A 60 660 18 HOH HOH . 
F 5 HOH A 61 661 23 HOH HOH . 
F 5 HOH A 62 662 46 HOH HOH . 
F 5 HOH A 63 663 24 HOH HOH . 
F 5 HOH A 64 664 9 HOH HOH . 
F 5 HOH A 65 665 2 HOH HOH . 
F 5 HOH A 66 666 85 HOH HOH . 
F 5 HOH A 67 667 118 HOH HOH . 
F 5 HOH A 68 668 116 HOH HOH . 
F 5 HOH A 69 669 42 HOH HOH . 
F 5 HOH A 70 670 57 HOH HOH . 
F 5 HOH A 71 671 15 HOH HOH . 
F 5 HOH A 72 672 154 HOH HOH . 
F 5 HOH A 73 673 26 HOH HOH . 
F 5 HOH A 74 674 33 HOH HOH . 
F 5 HOH A 75 675 29 HOH HOH . 
F 5 HOH A 76 676 102 HOH HOH . 
F 5 HOH A 77 677 81 HOH HOH . 
F 5 HOH A 78 678 88 HOH HOH . 
F 5 HOH A 79 679 157 HOH HOH . 
F 5 HOH A 80 680 112 HOH HOH . 
F 5 HOH A 81 681 163 HOH HOH . 
F 5 HOH A 82 682 19 HOH HOH . 
F 5 HOH A 83 683 41 HOH HOH . 
F 5 HOH A 84 684 63 HOH HOH . 
F 5 HOH A 85 685 205 HOH HOH . 
F 5 HOH A 86 686 93 HOH HOH . 
F 5 HOH A 87 687 48 HOH HOH . 
F 5 HOH A 88 688 170 HOH HOH . 
F 5 HOH A 89 689 145 HOH HOH . 
F 5 HOH A 90 690 49 HOH HOH . 
F 5 HOH A 91 691 43 HOH HOH . 
F 5 HOH A 92 692 4 HOH HOH . 
F 5 HOH A 93 693 31 HOH HOH . 
F 5 HOH A 94 694 196 HOH HOH . 
F 5 HOH A 95 695 83 HOH HOH . 
F 5 HOH A 96 696 52 HOH HOH . 
F 5 HOH A 97 697 77 HOH HOH . 
F 5 HOH A 98 698 66 HOH HOH . 
F 5 HOH A 99 699 96 HOH HOH . 
F 5 HOH A 100 700 146 HOH HOH . 
F 5 HOH A 101 701 55 HOH HOH . 
F 5 HOH A 102 702 10 HOH HOH . 
F 5 HOH A 103 703 92 HOH HOH . 
F 5 HOH A 104 704 45 HOH HOH . 
F 5 HOH A 105 705 107 HOH HOH . 
F 5 HOH A 106 706 64 HOH HOH . 
F 5 HOH A 107 707 159 HOH HOH . 
F 5 HOH A 108 708 160 HOH HOH . 
F 5 HOH A 109 709 143 HOH HOH . 
F 5 HOH A 110 710 73 HOH HOH . 
F 5 HOH A 111 711 50 HOH HOH . 
F 5 HOH A 112 712 193 HOH HOH . 
F 5 HOH A 113 713 78 HOH HOH . 
F 5 HOH A 114 714 82 HOH HOH . 
F 5 HOH A 115 715 119 HOH HOH . 
F 5 HOH A 116 716 150 HOH HOH . 
F 5 HOH A 117 717 62 HOH HOH . 
F 5 HOH A 118 718 114 HOH HOH . 
F 5 HOH A 119 719 70 HOH HOH . 
F 5 HOH A 120 720 106 HOH HOH . 
F 5 HOH A 121 721 138 HOH HOH . 
F 5 HOH A 122 722 172 HOH HOH . 
F 5 HOH A 123 723 189 HOH HOH . 
F 5 HOH A 124 724 109 HOH HOH . 
F 5 HOH A 125 725 53 HOH HOH . 
F 5 HOH A 126 726 30 HOH HOH . 
F 5 HOH A 127 727 123 HOH HOH . 
F 5 HOH A 128 728 101 HOH HOH . 
F 5 HOH A 129 729 148 HOH HOH . 
F 5 HOH A 130 730 103 HOH HOH . 
F 5 HOH A 131 731 136 HOH HOH . 
F 5 HOH A 132 732 126 HOH HOH . 
F 5 HOH A 133 733 212 HOH HOH . 
F 5 HOH A 134 734 152 HOH HOH . 
F 5 HOH A 135 735 182 HOH HOH . 
F 5 HOH A 136 736 206 HOH HOH . 
F 5 HOH A 137 737 37 HOH HOH . 
F 5 HOH A 138 738 130 HOH HOH . 
F 5 HOH A 139 739 202 HOH HOH . 
F 5 HOH A 140 740 177 HOH HOH . 
F 5 HOH A 141 741 195 HOH HOH . 
F 5 HOH A 142 742 180 HOH HOH . 
F 5 HOH A 143 743 188 HOH HOH . 
F 5 HOH A 144 744 153 HOH HOH . 
F 5 HOH A 145 745 137 HOH HOH . 
F 5 HOH A 146 746 125 HOH HOH . 
F 5 HOH A 147 747 74 HOH HOH . 
F 5 HOH A 148 748 110 HOH HOH . 
F 5 HOH A 149 749 199 HOH HOH . 
F 5 HOH A 150 750 144 HOH HOH . 
F 5 HOH A 151 751 184 HOH HOH . 
F 5 HOH A 152 752 187 HOH HOH . 
F 5 HOH A 153 753 173 HOH HOH . 
F 5 HOH A 154 754 155 HOH HOH . 
F 5 HOH A 155 755 190 HOH HOH . 
F 5 HOH A 156 756 201 HOH HOH . 
F 5 HOH A 157 757 113 HOH HOH . 
F 5 HOH A 158 758 147 HOH HOH . 
F 5 HOH A 159 759 79 HOH HOH . 
F 5 HOH A 160 760 174 HOH HOH . 
F 5 HOH A 161 761 40 HOH HOH . 
F 5 HOH A 162 762 35 HOH HOH . 
F 5 HOH A 163 763 99 HOH HOH . 
F 5 HOH A 164 764 204 HOH HOH . 
F 5 HOH A 165 765 181 HOH HOH . 
F 5 HOH A 166 766 166 HOH HOH . 
F 5 HOH A 167 767 156 HOH HOH . 
F 5 HOH A 168 768 194 HOH HOH . 
F 5 HOH A 169 769 207 HOH HOH . 
F 5 HOH A 170 770 104 HOH HOH . 
F 5 HOH A 171 771 161 HOH HOH . 
F 5 HOH A 172 772 127 HOH HOH . 
F 5 HOH A 173 773 65 HOH HOH . 
F 5 HOH A 174 774 58 HOH HOH . 
F 5 HOH A 175 775 158 HOH HOH . 
F 5 HOH A 176 776 203 HOH HOH . 
F 5 HOH A 177 777 176 HOH HOH . 
F 5 HOH A 178 778 72 HOH HOH . 
F 5 HOH A 179 779 135 HOH HOH . 
F 5 HOH A 180 780 200 HOH HOH . 
F 5 HOH A 181 781 209 HOH HOH . 
F 5 HOH A 182 782 59 HOH HOH . 
F 5 HOH A 183 783 210 HOH HOH . 
F 5 HOH A 184 784 61 HOH HOH . 
F 5 HOH A 185 785 139 HOH HOH . 
F 5 HOH A 186 786 131 HOH HOH . 
F 5 HOH A 187 787 165 HOH HOH . 
F 5 HOH A 188 788 34 HOH HOH . 
F 5 HOH A 189 789 97 HOH HOH . 
F 5 HOH A 190 790 108 HOH HOH . 
F 5 HOH A 191 791 183 HOH HOH . 
F 5 HOH A 192 792 142 HOH HOH . 
F 5 HOH A 193 793 111 HOH HOH . 
F 5 HOH A 194 794 211 HOH HOH . 
F 5 HOH A 195 795 164 HOH HOH . 
F 5 HOH A 196 796 36 HOH HOH . 
F 5 HOH A 197 797 191 HOH HOH . 
F 5 HOH A 198 798 169 HOH HOH . 
F 5 HOH A 199 799 71 HOH HOH . 
F 5 HOH A 200 800 171 HOH HOH . 
F 5 HOH A 201 801 90 HOH HOH . 
F 5 HOH A 202 802 129 HOH HOH . 
F 5 HOH A 203 803 141 HOH HOH . 
F 5 HOH A 204 804 178 HOH HOH . 
F 5 HOH A 205 805 208 HOH HOH . 
F 5 HOH A 206 806 115 HOH HOH . 
F 5 HOH A 207 807 149 HOH HOH . 
F 5 HOH A 208 808 151 HOH HOH . 
F 5 HOH A 209 809 192 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 17.435 -3.634 12.539 1 29.39 ? C1 EDO 501 A 1 
HETATM 2 O O1 EDO . . . B 2 17.228 -4.98 12.985 1 31.41 ? O1 EDO 501 A 1 
HETATM 3 C C2 EDO . . . B 2 16.557 -2.701 13.363 1 23.32 ? C2 EDO 501 A 1 
HETATM 4 O O2 EDO . . . B 2 16.482 -3.184 14.709 1 40.69 ? O2 EDO 501 A 1 
HETATM 5 H H11 EDO . . . B 2 17.182 -3.548 11.48 1 35.3 ? H11 EDO 501 A 1 
HETATM 6 H H12 EDO . . . B 2 18.486 -3.359 12.656 1 35.3 ? H12 EDO 501 A 1 
HETATM 7 H HO1 EDO . . . B 2 17.791 -5.579 12.476 1 37.73 ? HO1 EDO 501 A 1 
HETATM 8 H H21 EDO . . . B 2 16.976 -1.692 13.353 1 28.02 ? H21 EDO 501 A 1 
HETATM 9 H H22 EDO . . . B 2 15.556 -2.653 12.929 1 28.02 ? H22 EDO 501 A 1 
HETATM 10 H HO2 EDO . . . B 2 15.886 -2.62 15.221 1 48.87 ? HO2 EDO 501 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           10 
#