data_7L9M # _model_server_result.job_id Ijka7Bo32UDKa8HsPFMMBA _model_server_result.datetime_utc '2024-11-05 11:32:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l9m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7L9M # _exptl.entry_id 7L9M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.1 _cell.angle_beta 104.61 _cell.angle_gamma 90.07 _cell.entry_id 7L9M _cell.length_a 30.27 _cell.length_b 40.07 _cell.length_c 57.35 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L9M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7L9M _atom_sites.fract_transf_matrix[1][1] 0.033036 _atom_sites.fract_transf_matrix[1][2] 0.000042 _atom_sites.fract_transf_matrix[1][3] 0.008763 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024956 _atom_sites.fract_transf_matrix[2][3] 0.004609 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 1 EDO EDO . D 2 EDO A 1 202 3 EDO EDO . E 2 EDO A 1 203 4 EDO EDO . F 3 XR4 A 1 204 1 XR4 LIG . G 2 EDO B 1 201 2 EDO EDO . H 4 HOH A 1 301 188 HOH HOH . H 4 HOH A 2 302 243 HOH HOH . H 4 HOH A 3 303 295 HOH HOH . H 4 HOH A 4 304 261 HOH HOH . H 4 HOH A 5 305 52 HOH HOH . H 4 HOH A 6 306 107 HOH HOH . H 4 HOH A 7 307 282 HOH HOH . H 4 HOH A 8 308 168 HOH HOH . H 4 HOH A 9 309 178 HOH HOH . H 4 HOH A 10 310 190 HOH HOH . H 4 HOH A 11 311 158 HOH HOH . H 4 HOH A 12 312 96 HOH HOH . H 4 HOH A 13 313 269 HOH HOH . H 4 HOH A 14 314 15 HOH HOH . H 4 HOH A 15 315 251 HOH HOH . H 4 HOH A 16 316 328 HOH HOH . H 4 HOH A 17 317 85 HOH HOH . H 4 HOH A 18 318 93 HOH HOH . H 4 HOH A 19 319 31 HOH HOH . H 4 HOH A 20 320 18 HOH HOH . H 4 HOH A 21 321 119 HOH HOH . H 4 HOH A 22 322 110 HOH HOH . H 4 HOH A 23 323 50 HOH HOH . H 4 HOH A 24 324 60 HOH HOH . H 4 HOH A 25 325 347 HOH HOH . H 4 HOH A 26 326 142 HOH HOH . H 4 HOH A 27 327 246 HOH HOH . H 4 HOH A 28 328 82 HOH HOH . H 4 HOH A 29 329 1 HOH HOH . H 4 HOH A 30 330 180 HOH HOH . H 4 HOH A 31 331 264 HOH HOH . H 4 HOH A 32 332 337 HOH HOH . H 4 HOH A 33 333 231 HOH HOH . H 4 HOH A 34 334 41 HOH HOH . H 4 HOH A 35 335 48 HOH HOH . H 4 HOH A 36 336 33 HOH HOH . H 4 HOH A 37 337 250 HOH HOH . H 4 HOH A 38 338 315 HOH HOH . H 4 HOH A 39 339 56 HOH HOH . H 4 HOH A 40 340 74 HOH HOH . H 4 HOH A 41 341 77 HOH HOH . H 4 HOH A 42 342 169 HOH HOH . H 4 HOH A 43 343 86 HOH HOH . H 4 HOH A 44 344 83 HOH HOH . H 4 HOH A 45 345 144 HOH HOH . H 4 HOH A 46 346 341 HOH HOH . H 4 HOH A 47 347 101 HOH HOH . H 4 HOH A 48 348 54 HOH HOH . H 4 HOH A 49 349 88 HOH HOH . H 4 HOH A 50 350 62 HOH HOH . H 4 HOH A 51 351 20 HOH HOH . H 4 HOH A 52 352 352 HOH HOH . H 4 HOH A 53 353 71 HOH HOH . H 4 HOH A 54 354 64 HOH HOH . H 4 HOH A 55 355 291 HOH HOH . H 4 HOH A 56 356 10 HOH HOH . H 4 HOH A 57 357 351 HOH HOH . H 4 HOH A 58 358 232 HOH HOH . H 4 HOH A 59 359 36 HOH HOH . H 4 HOH A 60 360 6 HOH HOH . H 4 HOH A 61 361 126 HOH HOH . H 4 HOH A 62 362 42 HOH HOH . H 4 HOH A 63 363 273 HOH HOH . H 4 HOH A 64 364 195 HOH HOH . H 4 HOH A 65 365 346 HOH HOH . H 4 HOH A 66 366 147 HOH HOH . H 4 HOH A 67 367 57 HOH HOH . H 4 HOH A 68 368 21 HOH HOH . H 4 HOH A 69 369 316 HOH HOH . H 4 HOH A 70 370 58 HOH HOH . H 4 HOH A 71 371 97 HOH HOH . H 4 HOH A 72 372 255 HOH HOH . H 4 HOH A 73 373 212 HOH HOH . H 4 HOH A 74 374 37 HOH HOH . H 4 HOH A 75 375 298 HOH HOH . H 4 HOH A 76 376 215 HOH HOH . H 4 HOH A 77 377 3 HOH HOH . H 4 HOH A 78 378 68 HOH HOH . H 4 HOH A 79 379 121 HOH HOH . H 4 HOH A 80 380 118 HOH HOH . H 4 HOH A 81 381 12 HOH HOH . H 4 HOH A 82 382 364 HOH HOH . H 4 HOH A 83 383 65 HOH HOH . H 4 HOH A 84 384 89 HOH HOH . H 4 HOH A 85 385 34 HOH HOH . H 4 HOH A 86 386 258 HOH HOH . H 4 HOH A 87 387 132 HOH HOH . H 4 HOH A 88 388 55 HOH HOH . H 4 HOH A 89 389 67 HOH HOH . H 4 HOH A 90 390 24 HOH HOH . H 4 HOH A 91 391 237 HOH HOH . H 4 HOH A 92 392 129 HOH HOH . H 4 HOH A 93 393 286 HOH HOH . H 4 HOH A 94 394 23 HOH HOH . H 4 HOH A 95 395 204 HOH HOH . H 4 HOH A 96 396 92 HOH HOH . H 4 HOH A 97 397 90 HOH HOH . H 4 HOH A 98 398 115 HOH HOH . H 4 HOH A 99 399 80 HOH HOH . H 4 HOH A 100 400 35 HOH HOH . H 4 HOH A 101 401 61 HOH HOH . H 4 HOH A 102 402 211 HOH HOH . H 4 HOH A 103 403 236 HOH HOH . H 4 HOH A 104 404 173 HOH HOH . H 4 HOH A 105 405 300 HOH HOH . H 4 HOH A 106 406 105 HOH HOH . H 4 HOH A 107 407 353 HOH HOH . H 4 HOH A 108 408 140 HOH HOH . H 4 HOH A 109 409 308 HOH HOH . H 4 HOH A 110 410 252 HOH HOH . H 4 HOH A 111 411 29 HOH HOH . H 4 HOH A 112 412 39 HOH HOH . H 4 HOH A 113 413 133 HOH HOH . H 4 HOH A 114 414 192 HOH HOH . H 4 HOH A 115 415 183 HOH HOH . H 4 HOH A 116 416 265 HOH HOH . H 4 HOH A 117 417 324 HOH HOH . H 4 HOH A 118 418 287 HOH HOH . H 4 HOH A 119 419 153 HOH HOH . H 4 HOH A 120 420 270 HOH HOH . H 4 HOH A 121 421 186 HOH HOH . H 4 HOH A 122 422 157 HOH HOH . H 4 HOH A 123 423 134 HOH HOH . H 4 HOH A 124 424 70 HOH HOH . H 4 HOH A 125 425 336 HOH HOH . H 4 HOH A 126 426 43 HOH HOH . H 4 HOH A 127 427 149 HOH HOH . H 4 HOH A 128 428 225 HOH HOH . H 4 HOH A 129 429 220 HOH HOH . H 4 HOH A 130 430 156 HOH HOH . H 4 HOH A 131 431 123 HOH HOH . H 4 HOH A 132 432 313 HOH HOH . H 4 HOH A 133 433 146 HOH HOH . H 4 HOH A 134 434 356 HOH HOH . H 4 HOH A 135 435 125 HOH HOH . H 4 HOH A 136 436 117 HOH HOH . H 4 HOH A 137 437 164 HOH HOH . H 4 HOH A 138 438 135 HOH HOH . H 4 HOH A 139 439 210 HOH HOH . H 4 HOH A 140 440 288 HOH HOH . H 4 HOH A 141 441 235 HOH HOH . H 4 HOH A 142 442 205 HOH HOH . H 4 HOH A 143 443 330 HOH HOH . H 4 HOH A 144 444 342 HOH HOH . H 4 HOH A 145 445 357 HOH HOH . H 4 HOH A 146 446 281 HOH HOH . H 4 HOH A 147 447 165 HOH HOH . H 4 HOH A 148 448 199 HOH HOH . I 4 HOH B 1 301 318 HOH HOH . I 4 HOH B 2 302 299 HOH HOH . I 4 HOH B 3 303 262 HOH HOH . I 4 HOH B 4 304 304 HOH HOH . I 4 HOH B 5 305 177 HOH HOH . I 4 HOH B 6 306 263 HOH HOH . I 4 HOH B 7 307 91 HOH HOH . I 4 HOH B 8 308 345 HOH HOH . I 4 HOH B 9 309 53 HOH HOH . I 4 HOH B 10 310 230 HOH HOH . I 4 HOH B 11 311 102 HOH HOH . I 4 HOH B 12 312 343 HOH HOH . I 4 HOH B 13 313 314 HOH HOH . I 4 HOH B 14 314 159 HOH HOH . I 4 HOH B 15 315 14 HOH HOH . I 4 HOH B 16 316 332 HOH HOH . I 4 HOH B 17 317 293 HOH HOH . I 4 HOH B 18 318 75 HOH HOH . I 4 HOH B 19 319 155 HOH HOH . I 4 HOH B 20 320 233 HOH HOH . I 4 HOH B 21 321 47 HOH HOH . I 4 HOH B 22 322 221 HOH HOH . I 4 HOH B 23 323 171 HOH HOH . I 4 HOH B 24 324 4 HOH HOH . I 4 HOH B 25 325 170 HOH HOH . I 4 HOH B 26 326 167 HOH HOH . I 4 HOH B 27 327 145 HOH HOH . I 4 HOH B 28 328 154 HOH HOH . I 4 HOH B 29 329 100 HOH HOH . I 4 HOH B 30 330 2 HOH HOH . I 4 HOH B 31 331 44 HOH HOH . I 4 HOH B 32 332 63 HOH HOH . I 4 HOH B 33 333 191 HOH HOH . I 4 HOH B 34 334 202 HOH HOH . I 4 HOH B 35 335 16 HOH HOH . I 4 HOH B 36 336 40 HOH HOH . I 4 HOH B 37 337 99 HOH HOH . I 4 HOH B 38 338 9 HOH HOH . I 4 HOH B 39 339 113 HOH HOH . I 4 HOH B 40 340 200 HOH HOH . I 4 HOH B 41 341 301 HOH HOH . I 4 HOH B 42 342 223 HOH HOH . I 4 HOH B 43 343 17 HOH HOH . I 4 HOH B 44 344 72 HOH HOH . I 4 HOH B 45 345 49 HOH HOH . I 4 HOH B 46 346 182 HOH HOH . I 4 HOH B 47 347 176 HOH HOH . I 4 HOH B 48 348 248 HOH HOH . I 4 HOH B 49 349 206 HOH HOH . I 4 HOH B 50 350 46 HOH HOH . I 4 HOH B 51 351 362 HOH HOH . I 4 HOH B 52 352 94 HOH HOH . I 4 HOH B 53 353 76 HOH HOH . I 4 HOH B 54 354 139 HOH HOH . I 4 HOH B 55 355 127 HOH HOH . I 4 HOH B 56 356 27 HOH HOH . I 4 HOH B 57 357 197 HOH HOH . I 4 HOH B 58 358 333 HOH HOH . I 4 HOH B 59 359 189 HOH HOH . I 4 HOH B 60 360 109 HOH HOH . I 4 HOH B 61 361 208 HOH HOH . I 4 HOH B 62 362 78 HOH HOH . I 4 HOH B 63 363 271 HOH HOH . I 4 HOH B 64 364 294 HOH HOH . I 4 HOH B 65 365 234 HOH HOH . I 4 HOH B 66 366 95 HOH HOH . I 4 HOH B 67 367 162 HOH HOH . I 4 HOH B 68 368 104 HOH HOH . I 4 HOH B 69 369 106 HOH HOH . I 4 HOH B 70 370 8 HOH HOH . I 4 HOH B 71 371 32 HOH HOH . I 4 HOH B 72 372 38 HOH HOH . I 4 HOH B 73 373 257 HOH HOH . I 4 HOH B 74 374 323 HOH HOH . I 4 HOH B 75 375 5 HOH HOH . I 4 HOH B 76 376 275 HOH HOH . I 4 HOH B 77 377 30 HOH HOH . I 4 HOH B 78 378 244 HOH HOH . I 4 HOH B 79 379 214 HOH HOH . I 4 HOH B 80 380 28 HOH HOH . I 4 HOH B 81 381 25 HOH HOH . I 4 HOH B 82 382 312 HOH HOH . I 4 HOH B 83 383 116 HOH HOH . I 4 HOH B 84 384 305 HOH HOH . I 4 HOH B 85 385 148 HOH HOH . I 4 HOH B 86 386 175 HOH HOH . I 4 HOH B 87 387 120 HOH HOH . I 4 HOH B 88 388 87 HOH HOH . I 4 HOH B 89 389 11 HOH HOH . I 4 HOH B 90 390 26 HOH HOH . I 4 HOH B 91 391 111 HOH HOH . I 4 HOH B 92 392 354 HOH HOH . I 4 HOH B 93 393 69 HOH HOH . I 4 HOH B 94 394 108 HOH HOH . I 4 HOH B 95 395 45 HOH HOH . I 4 HOH B 96 396 334 HOH HOH . I 4 HOH B 97 397 51 HOH HOH . I 4 HOH B 98 398 319 HOH HOH . I 4 HOH B 99 399 128 HOH HOH . I 4 HOH B 100 400 179 HOH HOH . I 4 HOH B 101 401 320 HOH HOH . I 4 HOH B 102 402 198 HOH HOH . I 4 HOH B 103 403 114 HOH HOH . I 4 HOH B 104 404 266 HOH HOH . I 4 HOH B 105 405 160 HOH HOH . I 4 HOH B 106 406 122 HOH HOH . I 4 HOH B 107 407 73 HOH HOH . I 4 HOH B 108 408 331 HOH HOH . I 4 HOH B 109 409 172 HOH HOH . I 4 HOH B 110 410 81 HOH HOH . I 4 HOH B 111 411 13 HOH HOH . I 4 HOH B 112 412 260 HOH HOH . I 4 HOH B 113 413 335 HOH HOH . I 4 HOH B 114 414 131 HOH HOH . I 4 HOH B 115 415 242 HOH HOH . I 4 HOH B 116 416 22 HOH HOH . I 4 HOH B 117 417 84 HOH HOH . I 4 HOH B 118 418 59 HOH HOH . I 4 HOH B 119 419 185 HOH HOH . I 4 HOH B 120 420 112 HOH HOH . I 4 HOH B 121 421 329 HOH HOH . I 4 HOH B 122 422 187 HOH HOH . I 4 HOH B 123 423 359 HOH HOH . I 4 HOH B 124 424 355 HOH HOH . I 4 HOH B 125 425 19 HOH HOH . I 4 HOH B 126 426 228 HOH HOH . I 4 HOH B 127 427 363 HOH HOH . I 4 HOH B 128 428 217 HOH HOH . I 4 HOH B 129 429 222 HOH HOH . I 4 HOH B 130 430 151 HOH HOH . I 4 HOH B 131 431 365 HOH HOH . I 4 HOH B 132 432 196 HOH HOH . I 4 HOH B 133 433 201 HOH HOH . I 4 HOH B 134 434 361 HOH HOH . I 4 HOH B 135 435 218 HOH HOH . I 4 HOH B 136 436 152 HOH HOH . I 4 HOH B 137 437 285 HOH HOH . I 4 HOH B 138 438 311 HOH HOH . I 4 HOH B 139 439 124 HOH HOH . I 4 HOH B 140 440 136 HOH HOH . I 4 HOH B 141 441 226 HOH HOH . I 4 HOH B 142 442 239 HOH HOH . I 4 HOH B 143 443 276 HOH HOH . I 4 HOH B 144 444 241 HOH HOH . I 4 HOH B 145 445 66 HOH HOH . I 4 HOH B 146 446 7 HOH HOH . I 4 HOH B 147 447 150 HOH HOH . I 4 HOH B 148 448 284 HOH HOH . I 4 HOH B 149 449 267 HOH HOH . I 4 HOH B 150 450 268 HOH HOH . I 4 HOH B 151 451 193 HOH HOH . I 4 HOH B 152 452 348 HOH HOH . I 4 HOH B 153 453 184 HOH HOH . I 4 HOH B 154 454 174 HOH HOH . I 4 HOH B 155 455 207 HOH HOH . I 4 HOH B 156 456 161 HOH HOH . I 4 HOH B 157 457 245 HOH HOH . I 4 HOH B 158 458 259 HOH HOH . I 4 HOH B 159 459 358 HOH HOH . I 4 HOH B 160 460 79 HOH HOH . I 4 HOH B 161 461 317 HOH HOH . I 4 HOH B 162 462 340 HOH HOH . I 4 HOH B 163 463 141 HOH HOH . I 4 HOH B 164 464 98 HOH HOH . I 4 HOH B 165 465 224 HOH HOH . I 4 HOH B 166 466 360 HOH HOH . I 4 HOH B 167 467 322 HOH HOH . I 4 HOH B 168 468 163 HOH HOH . I 4 HOH B 169 469 137 HOH HOH . I 4 HOH B 170 470 256 HOH HOH . I 4 HOH B 171 471 292 HOH HOH . I 4 HOH B 172 472 302 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -16.682 -1.716 -18.428 1 22.01 ? C1 EDO 201 A 1 HETATM 2 O O1 EDO . . . C 2 -16.561 -2.941 -19.164 1 26.25 ? O1 EDO 201 A 1 HETATM 3 C C2 EDO . . . C 2 -15.401 -0.931 -18.615 1 19.15 ? C2 EDO 201 A 1 HETATM 4 O O2 EDO . . . C 2 -14.301 -1.641 -18.023 1 16.93 ? O2 EDO 201 A 1 # _model_server_stats.io_time_ms 117 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #