data_7L9T # _model_server_result.job_id yTWxqDhPJBFm_u7Ex7lOew _model_server_result.datetime_utc '2024-12-02 13:03:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7L9T # _exptl.entry_id 7L9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.408 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(3-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L9T _cell.length_a 53.75 _cell.length_b 53.75 _cell.length_c 107.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H24 N4 O4' _chem_comp.formula_weight 360.408 _chem_comp.id QKJ _chem_comp.mon_nstd_flag . _chem_comp.name '3-(3-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N25 C24 QKJ sing 286 n n C24 N26 QKJ doub 287 n y C24 N23 QKJ sing 288 n y N26 C03 QKJ sing 289 n y N23 C21 QKJ doub 290 n y C03 C02 QKJ sing 291 n n C03 C04 QKJ doub 292 n y C21 C04 QKJ sing 293 n y C21 N22 QKJ sing 294 n n C02 C01 QKJ sing 295 n n C04 O05 QKJ sing 296 n n O05 C06 QKJ sing 297 n n C06 C07 QKJ sing 298 n n C15 C14 QKJ sing 299 n n C15 C16 QKJ sing 300 n n C14 C13 QKJ doub 301 n y C14 C20 QKJ sing 302 n y C13 C12 QKJ sing 303 n y C07 C08 QKJ sing 304 n n C20 C10 QKJ doub 305 n y C12 C11 QKJ doub 306 n y C16 C17 QKJ sing 307 n n C10 C11 QKJ sing 308 n y C10 O09 QKJ sing 309 n n O09 C08 QKJ sing 310 n n C17 O18 QKJ doub 311 n n C17 O19 QKJ sing 312 n n C11 H1 QKJ sing 313 n n C12 H2 QKJ sing 314 n n C15 H3 QKJ sing 315 n n C15 H4 QKJ sing 316 n n C16 H5 QKJ sing 317 n n C16 H6 QKJ sing 318 n n C01 H7 QKJ sing 319 n n C01 H8 QKJ sing 320 n n C01 H9 QKJ sing 321 n n C02 H10 QKJ sing 322 n n C02 H11 QKJ sing 323 n n C06 H12 QKJ sing 324 n n C06 H13 QKJ sing 325 n n C07 H14 QKJ sing 326 n n C07 H15 QKJ sing 327 n n C08 H16 QKJ sing 328 n n C08 H17 QKJ sing 329 n n C13 H18 QKJ sing 330 n n C20 H19 QKJ sing 331 n n N22 H20 QKJ sing 332 n n N22 H21 QKJ sing 333 n n N25 H22 QKJ sing 334 n n N25 H23 QKJ sing 335 n n O19 H24 QKJ sing 336 n n # _atom_sites.entry_id 7L9T _atom_sites.fract_transf_matrix[1][1] 0.018605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QKJ A 1 201 201 QKJ 565 . C 3 SO4 A 1 202 200 SO4 SO4 . D 3 SO4 A 1 203 201 SO4 SO4 . E 4 DMS A 1 204 301 DMS DMS . F 5 HOH A 1 301 101 HOH HOH . F 5 HOH A 2 302 17 HOH HOH . F 5 HOH A 3 303 66 HOH HOH . F 5 HOH A 4 304 61 HOH HOH . F 5 HOH A 5 305 24 HOH HOH . F 5 HOH A 6 306 72 HOH HOH . F 5 HOH A 7 307 16 HOH HOH . F 5 HOH A 8 308 31 HOH HOH . F 5 HOH A 9 309 85 HOH HOH . F 5 HOH A 10 310 6 HOH HOH . F 5 HOH A 11 311 91 HOH HOH . F 5 HOH A 12 312 13 HOH HOH . F 5 HOH A 13 313 41 HOH HOH . F 5 HOH A 14 314 44 HOH HOH . F 5 HOH A 15 315 50 HOH HOH . F 5 HOH A 16 316 7 HOH HOH . F 5 HOH A 17 317 11 HOH HOH . F 5 HOH A 18 318 4 HOH HOH . F 5 HOH A 19 319 19 HOH HOH . F 5 HOH A 20 320 8 HOH HOH . F 5 HOH A 21 321 26 HOH HOH . F 5 HOH A 22 322 35 HOH HOH . F 5 HOH A 23 323 78 HOH HOH . F 5 HOH A 24 324 76 HOH HOH . F 5 HOH A 25 325 5 HOH HOH . F 5 HOH A 26 326 74 HOH HOH . F 5 HOH A 27 327 34 HOH HOH . F 5 HOH A 28 328 81 HOH HOH . F 5 HOH A 29 329 10 HOH HOH . F 5 HOH A 30 330 52 HOH HOH . F 5 HOH A 31 331 9 HOH HOH . F 5 HOH A 32 332 75 HOH HOH . F 5 HOH A 33 333 57 HOH HOH . F 5 HOH A 34 334 2 HOH HOH . F 5 HOH A 35 335 22 HOH HOH . F 5 HOH A 36 336 37 HOH HOH . F 5 HOH A 37 337 14 HOH HOH . F 5 HOH A 38 338 1 HOH HOH . F 5 HOH A 39 339 3 HOH HOH . F 5 HOH A 40 340 93 HOH HOH . F 5 HOH A 41 341 68 HOH HOH . F 5 HOH A 42 342 32 HOH HOH . F 5 HOH A 43 343 20 HOH HOH . F 5 HOH A 44 344 53 HOH HOH . F 5 HOH A 45 345 45 HOH HOH . F 5 HOH A 46 346 23 HOH HOH . F 5 HOH A 47 347 30 HOH HOH . F 5 HOH A 48 348 65 HOH HOH . F 5 HOH A 49 349 38 HOH HOH . F 5 HOH A 50 350 46 HOH HOH . F 5 HOH A 51 351 12 HOH HOH . F 5 HOH A 52 352 21 HOH HOH . F 5 HOH A 53 353 98 HOH HOH . F 5 HOH A 54 354 27 HOH HOH . F 5 HOH A 55 355 48 HOH HOH . F 5 HOH A 56 356 71 HOH HOH . F 5 HOH A 57 357 69 HOH HOH . F 5 HOH A 58 358 25 HOH HOH . F 5 HOH A 59 359 62 HOH HOH . F 5 HOH A 60 360 51 HOH HOH . F 5 HOH A 61 361 80 HOH HOH . F 5 HOH A 62 362 54 HOH HOH . F 5 HOH A 63 363 42 HOH HOH . F 5 HOH A 64 364 73 HOH HOH . F 5 HOH A 65 365 43 HOH HOH . F 5 HOH A 66 366 36 HOH HOH . F 5 HOH A 67 367 60 HOH HOH . F 5 HOH A 68 368 56 HOH HOH . F 5 HOH A 69 369 92 HOH HOH . F 5 HOH A 70 370 79 HOH HOH . F 5 HOH A 71 371 64 HOH HOH . F 5 HOH A 72 372 33 HOH HOH . F 5 HOH A 73 373 97 HOH HOH . F 5 HOH A 74 374 29 HOH HOH . F 5 HOH A 75 375 47 HOH HOH . F 5 HOH A 76 376 39 HOH HOH . F 5 HOH A 77 377 70 HOH HOH . F 5 HOH A 78 378 18 HOH HOH . F 5 HOH A 79 379 40 HOH HOH . F 5 HOH A 80 380 15 HOH HOH . F 5 HOH A 81 381 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 QKJ . . . B 2 -8.306 4.916 -18 1 37.87 ? C11 QKJ 201 A 1 HETATM 2 C C12 QKJ . . . B 2 -7.255 5.321 -18.797 1 40.79 ? C12 QKJ 201 A 1 HETATM 3 C C15 QKJ . . . B 2 -4.731 6.541 -16.223 1 43.25 ? C15 QKJ 201 A 1 HETATM 4 C C16 QKJ . . . B 2 -3.799 5.427 -15.727 1 44.43 ? C16 QKJ 201 A 1 HETATM 5 C C01 QKJ . . . B 2 -9.446 8.429 -16.134 1 25.94 ? C01 QKJ 201 A 1 HETATM 6 C C02 QKJ . . . B 2 -10.982 8.51 -16.312 1 23.6 ? C02 QKJ 201 A 1 HETATM 7 C C03 QKJ . . . B 2 -11.604 8.814 -14.961 1 17.01 ? C03 QKJ 201 A 1 HETATM 8 C C04 QKJ . . . B 2 -12.207 7.854 -14.213 1 19.95 ? C04 QKJ 201 A 1 HETATM 9 C C06 QKJ . . . B 2 -11.259 5.613 -14.221 1 22.02 ? C06 QKJ 201 A 1 HETATM 10 C C07 QKJ . . . B 2 -11.464 4.395 -15.115 1 33.18 ? C07 QKJ 201 A 1 HETATM 11 C C08 QKJ . . . B 2 -10.625 4.534 -16.385 1 30.95 ? C08 QKJ 201 A 1 HETATM 12 C C10 QKJ . . . B 2 -8.192 5.038 -16.626 1 36.8 ? C10 QKJ 201 A 1 HETATM 13 C C13 QKJ . . . B 2 -6.093 5.841 -18.245 1 37.86 ? C13 QKJ 201 A 1 HETATM 14 C C14 QKJ . . . B 2 -5.97 5.971 -16.868 1 40.89 ? C14 QKJ 201 A 1 HETATM 15 C C17 QKJ . . . B 2 -3.349 5.683 -14.245 1 33.75 ? C17 QKJ 201 A 1 HETATM 16 C C20 QKJ . . . B 2 -7.034 5.557 -16.066 1 37.69 ? C20 QKJ 201 A 1 HETATM 17 C C21 QKJ . . . B 2 -12.746 8.244 -12.97 1 21.04 ? C21 QKJ 201 A 1 HETATM 18 C C24 QKJ . . . B 2 -12.054 10.389 -13.357 1 19.21 ? C24 QKJ 201 A 1 HETATM 19 N N22 QKJ . . . B 2 -13.362 7.339 -12.181 1 22.56 ? N22 QKJ 201 A 1 HETATM 20 N N23 QKJ . . . B 2 -12.661 9.507 -12.564 1 18.39 ? N23 QKJ 201 A 1 HETATM 21 N N25 QKJ . . . B 2 -11.96 11.671 -12.958 1 16.9 ? N25 QKJ 201 A 1 HETATM 22 N N26 QKJ . . . B 2 -11.526 10.072 -14.533 1 16.9 ? N26 QKJ 201 A 1 HETATM 23 O O05 QKJ . . . B 2 -12.308 6.537 -14.634 1 21.88 ? O05 QKJ 201 A 1 HETATM 24 O O09 QKJ . . . B 2 -9.281 4.611 -15.88 1 36.91 ? O09 QKJ 201 A 1 HETATM 25 O O18 QKJ . . . B 2 -4.161 6.307 -13.53 1 28.08 ? O18 QKJ 201 A 1 HETATM 26 O O19 QKJ . . . B 2 -2.217 5.217 -13.976 1 37.92 ? O19 QKJ 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 26 #