data_7L9T # _model_server_result.job_id AUd0D8rZ5isE1k4lWx9mog _model_server_result.datetime_utc '2024-12-02 12:40:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7L9T # _exptl.entry_id 7L9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L9T _cell.length_a 53.75 _cell.length_b 53.75 _cell.length_c 107.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7L9T _atom_sites.fract_transf_matrix[1][1] 0.018605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QKJ A 1 201 201 QKJ 565 . C 3 SO4 A 1 202 200 SO4 SO4 . D 3 SO4 A 1 203 201 SO4 SO4 . E 4 DMS A 1 204 301 DMS DMS . F 5 HOH A 1 301 101 HOH HOH . F 5 HOH A 2 302 17 HOH HOH . F 5 HOH A 3 303 66 HOH HOH . F 5 HOH A 4 304 61 HOH HOH . F 5 HOH A 5 305 24 HOH HOH . F 5 HOH A 6 306 72 HOH HOH . F 5 HOH A 7 307 16 HOH HOH . F 5 HOH A 8 308 31 HOH HOH . F 5 HOH A 9 309 85 HOH HOH . F 5 HOH A 10 310 6 HOH HOH . F 5 HOH A 11 311 91 HOH HOH . F 5 HOH A 12 312 13 HOH HOH . F 5 HOH A 13 313 41 HOH HOH . F 5 HOH A 14 314 44 HOH HOH . F 5 HOH A 15 315 50 HOH HOH . F 5 HOH A 16 316 7 HOH HOH . F 5 HOH A 17 317 11 HOH HOH . F 5 HOH A 18 318 4 HOH HOH . F 5 HOH A 19 319 19 HOH HOH . F 5 HOH A 20 320 8 HOH HOH . F 5 HOH A 21 321 26 HOH HOH . F 5 HOH A 22 322 35 HOH HOH . F 5 HOH A 23 323 78 HOH HOH . F 5 HOH A 24 324 76 HOH HOH . F 5 HOH A 25 325 5 HOH HOH . F 5 HOH A 26 326 74 HOH HOH . F 5 HOH A 27 327 34 HOH HOH . F 5 HOH A 28 328 81 HOH HOH . F 5 HOH A 29 329 10 HOH HOH . F 5 HOH A 30 330 52 HOH HOH . F 5 HOH A 31 331 9 HOH HOH . F 5 HOH A 32 332 75 HOH HOH . F 5 HOH A 33 333 57 HOH HOH . F 5 HOH A 34 334 2 HOH HOH . F 5 HOH A 35 335 22 HOH HOH . F 5 HOH A 36 336 37 HOH HOH . F 5 HOH A 37 337 14 HOH HOH . F 5 HOH A 38 338 1 HOH HOH . F 5 HOH A 39 339 3 HOH HOH . F 5 HOH A 40 340 93 HOH HOH . F 5 HOH A 41 341 68 HOH HOH . F 5 HOH A 42 342 32 HOH HOH . F 5 HOH A 43 343 20 HOH HOH . F 5 HOH A 44 344 53 HOH HOH . F 5 HOH A 45 345 45 HOH HOH . F 5 HOH A 46 346 23 HOH HOH . F 5 HOH A 47 347 30 HOH HOH . F 5 HOH A 48 348 65 HOH HOH . F 5 HOH A 49 349 38 HOH HOH . F 5 HOH A 50 350 46 HOH HOH . F 5 HOH A 51 351 12 HOH HOH . F 5 HOH A 52 352 21 HOH HOH . F 5 HOH A 53 353 98 HOH HOH . F 5 HOH A 54 354 27 HOH HOH . F 5 HOH A 55 355 48 HOH HOH . F 5 HOH A 56 356 71 HOH HOH . F 5 HOH A 57 357 69 HOH HOH . F 5 HOH A 58 358 25 HOH HOH . F 5 HOH A 59 359 62 HOH HOH . F 5 HOH A 60 360 51 HOH HOH . F 5 HOH A 61 361 80 HOH HOH . F 5 HOH A 62 362 54 HOH HOH . F 5 HOH A 63 363 42 HOH HOH . F 5 HOH A 64 364 73 HOH HOH . F 5 HOH A 65 365 43 HOH HOH . F 5 HOH A 66 366 36 HOH HOH . F 5 HOH A 67 367 60 HOH HOH . F 5 HOH A 68 368 56 HOH HOH . F 5 HOH A 69 369 92 HOH HOH . F 5 HOH A 70 370 79 HOH HOH . F 5 HOH A 71 371 64 HOH HOH . F 5 HOH A 72 372 33 HOH HOH . F 5 HOH A 73 373 97 HOH HOH . F 5 HOH A 74 374 29 HOH HOH . F 5 HOH A 75 375 47 HOH HOH . F 5 HOH A 76 376 39 HOH HOH . F 5 HOH A 77 377 70 HOH HOH . F 5 HOH A 78 378 18 HOH HOH . F 5 HOH A 79 379 40 HOH HOH . F 5 HOH A 80 380 15 HOH HOH . F 5 HOH A 81 381 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 4 -10.496 10.837 -21.363 0.62 39.2 ? S DMS 204 A 1 HETATM 2 O O DMS . . . E 4 -9.975 11.914 -20.487 0.62 33.04 ? O DMS 204 A 1 HETATM 3 C C1 DMS . . . E 4 -10.687 9.24 -20.526 0.62 31.85 ? C1 DMS 204 A 1 HETATM 4 C C2 DMS . . . E 4 -9.218 10.328 -22.542 0.62 26.62 ? C2 DMS 204 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #