data_7LAI # _model_server_result.job_id PtRZsr3zHhJPGqe5QnR43g _model_server_result.datetime_utc '2024-11-22 06:23:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7LAI # _exptl.entry_id 7LAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 521.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 138.48 _cell.angle_gamma 90 _cell.entry_id 7LAI _cell.length_a 55.55 _cell.length_b 81.73 _cell.length_c 48.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H39 N7 O3' _chem_comp.formula_weight 521.654 _chem_comp.id R78 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C4 R78 doub 277 n y N1 C1 R78 sing 278 n y N3 C5 R78 sing 279 n n N3 C8 R78 sing 280 n n N3 C2 R78 sing 281 n n C4 C3 R78 sing 282 n y C5 C6 R78 sing 283 n n C5 C9 R78 sing 284 n n C6 O1 R78 doub 285 n n C6 N4 R78 sing 286 n n C7 C20 R78 doub 287 n y C7 C16 R78 sing 288 n y C7 N5 R78 sing 289 n n C8 C15 R78 sing 290 n n C8 C12 R78 sing 291 n n C10 C9 R78 sing 292 n n C13 C14 R78 sing 293 n n C13 C12 R78 sing 294 n n C15 C14 R78 sing 295 n n C17 C18 R78 sing 296 n y C17 C16 R78 doub 297 n y C20 C19 R78 sing 298 n y C21 O2 R78 doub 299 n n C21 N6 R78 sing 300 n n C21 C18 R78 sing 301 n n C22 N6 R78 sing 302 n n C22 C29 R78 sing 303 n n C22 C23 R78 sing 304 n n C24 N7 R78 sing 305 n n C24 C23 R78 sing 306 n n C28 C29 R78 sing 307 n n C28 N7 R78 sing 308 n n N7 C30 R78 sing 309 n n C18 C19 R78 doub 310 n y C16 O3 R78 sing 311 n n O3 C31 R78 sing 312 n n N5 C1 R78 sing 313 n n C1 N2 R78 doub 314 n y N2 C2 R78 sing 315 n y C2 C3 R78 doub 316 n y N4 C11 R78 sing 317 n n N4 C3 R78 sing 318 n n C4 H4 R78 sing 319 n n C5 H5 R78 sing 320 n n C8 H8 R78 sing 321 n n C10 H10 R78 sing 322 n n C10 H10A R78 sing 323 n n C10 H10B R78 sing 324 n n C13 H13 R78 sing 325 n n C13 H13A R78 sing 326 n n C15 H15 R78 sing 327 n n C15 H15A R78 sing 328 n n C17 H17 R78 sing 329 n n C20 H20 R78 sing 330 n n C22 H22 R78 sing 331 n n C24 H24 R78 sing 332 n n C24 H24A R78 sing 333 n n C28 H28 R78 sing 334 n n C28 H28A R78 sing 335 n n N6 HN6 R78 sing 336 n n C29 H29 R78 sing 337 n n C29 H29A R78 sing 338 n n C30 H30 R78 sing 339 n n C30 H30A R78 sing 340 n n C30 H30B R78 sing 341 n n C23 H23 R78 sing 342 n n C23 H23A R78 sing 343 n n C31 H31 R78 sing 344 n n C31 H31A R78 sing 345 n n C31 H31B R78 sing 346 n n C19 H19 R78 sing 347 n n N5 HN5 R78 sing 348 n n C14 H14 R78 sing 349 n n C14 H14A R78 sing 350 n n C12 H12 R78 sing 351 n n C12 H12A R78 sing 352 n n C9 H9 R78 sing 353 n n C9 H9A R78 sing 354 n n C11 H11 R78 sing 355 n n C11 H11A R78 sing 356 n n C11 H11B R78 sing 357 n n # _atom_sites.entry_id 7LAI _atom_sites.fract_transf_matrix[1][1] 0.018002 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.020332 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 R78 A 1 201 1 R78 R78 . C 3 HOH A 1 301 18 HOH HOH . C 3 HOH A 2 302 41 HOH HOH . C 3 HOH A 3 303 45 HOH HOH . C 3 HOH A 4 304 43 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 9 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 33 HOH HOH . C 3 HOH A 9 309 20 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 32 HOH HOH . C 3 HOH A 12 312 24 HOH HOH . C 3 HOH A 13 313 40 HOH HOH . C 3 HOH A 14 314 1 HOH HOH . C 3 HOH A 15 315 26 HOH HOH . C 3 HOH A 16 316 2 HOH HOH . C 3 HOH A 17 317 21 HOH HOH . C 3 HOH A 18 318 6 HOH HOH . C 3 HOH A 19 319 12 HOH HOH . C 3 HOH A 20 320 46 HOH HOH . C 3 HOH A 21 321 34 HOH HOH . C 3 HOH A 22 322 28 HOH HOH . C 3 HOH A 23 323 15 HOH HOH . C 3 HOH A 24 324 30 HOH HOH . C 3 HOH A 25 325 44 HOH HOH . C 3 HOH A 26 326 25 HOH HOH . C 3 HOH A 27 327 39 HOH HOH . C 3 HOH A 28 328 37 HOH HOH . C 3 HOH A 29 329 8 HOH HOH . C 3 HOH A 30 330 23 HOH HOH . C 3 HOH A 31 331 14 HOH HOH . C 3 HOH A 32 332 3 HOH HOH . C 3 HOH A 33 333 48 HOH HOH . C 3 HOH A 34 334 49 HOH HOH . C 3 HOH A 35 335 36 HOH HOH . C 3 HOH A 36 336 13 HOH HOH . C 3 HOH A 37 337 29 HOH HOH . C 3 HOH A 38 338 47 HOH HOH . C 3 HOH A 39 339 50 HOH HOH . C 3 HOH A 40 340 31 HOH HOH . C 3 HOH A 41 341 19 HOH HOH . C 3 HOH A 42 342 11 HOH HOH . C 3 HOH A 43 343 27 HOH HOH . C 3 HOH A 44 344 22 HOH HOH . C 3 HOH A 45 345 35 HOH HOH . C 3 HOH A 46 346 16 HOH HOH . C 3 HOH A 47 347 42 HOH HOH . C 3 HOH A 48 348 4 HOH HOH . C 3 HOH A 49 349 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 R78 . . . B 2 15.379 -3.574 -3.969 1 39.11 ? N1 R78 201 A 1 HETATM 2 N N3 R78 . . . B 2 11.893 -1.276 -3.83 1 39.33 ? N3 R78 201 A 1 HETATM 3 C C4 R78 . . . B 2 14.334 -4.033 -3.243 1 35.95 ? C4 R78 201 A 1 HETATM 4 C C5 R78 . . . B 2 10.911 -1.394 -2.816 1 37.49 ? C5 R78 201 A 1 HETATM 5 C C6 R78 . . . B 2 10.808 -2.848 -2.238 1 32.48 ? C6 R78 201 A 1 HETATM 6 C C7 R78 . . . B 2 17.571 -1.89 -5.827 1 53.8 ? C7 R78 201 A 1 HETATM 7 C C8 R78 . . . B 2 11.965 -0.296 -4.908 1 38.06 ? C8 R78 201 A 1 HETATM 8 C C10 R78 . . . B 2 12.541 -0.736 -0.902 1 37.25 ? C10 R78 201 A 1 HETATM 9 C C13 R78 . . . B 2 12.773 1.801 -5.691 1 46.09 ? C13 R78 201 A 1 HETATM 10 C C15 R78 . . . B 2 10.799 0.146 -5.44 1 42.78 ? C15 R78 201 A 1 HETATM 11 C C17 R78 . . . B 2 19.597 -1.37 -6.771 1 58.63 ? C17 R78 201 A 1 HETATM 12 C C20 R78 . . . B 2 17.911 -3.136 -5.35 1 49.63 ? C20 R78 201 A 1 HETATM 13 C C21 R78 . . . B 2 21.501 -2.897 -6.682 1 59.49 ? C21 R78 201 A 1 HETATM 14 C C22 R78 . . . B 2 23.598 -1.782 -7.711 1 65.42 ? C22 R78 201 A 1 HETATM 15 C C24 R78 . . . B 2 25.915 -1.061 -7.15 1 71.34 ? C24 R78 201 A 1 HETATM 16 C C28 R78 . . . B 2 25.066 -0.825 -9.568 1 73.7 ? C28 R78 201 A 1 HETATM 17 O O2 R78 . . . B 2 22.022 -3.952 -6.486 1 59.44 ? O2 R78 201 A 1 HETATM 18 N N6 R78 . . . B 2 22.193 -1.743 -7.278 1 61.57 ? N6 R78 201 A 1 HETATM 19 C C29 R78 . . . B 2 23.651 -1.293 -9.134 1 69.77 ? C29 R78 201 A 1 HETATM 20 N N7 R78 . . . B 2 26.188 -1.207 -8.644 1 78.99 ? N7 R78 201 A 1 HETATM 21 C C30 R78 . . . B 2 26.625 -2.581 -8.943 1 84.04 ? C30 R78 201 A 1 HETATM 22 C C23 R78 . . . B 2 24.428 -0.895 -6.814 1 69.04 ? C23 R78 201 A 1 HETATM 23 C C18 R78 . . . B 2 20.032 -2.608 -6.324 1 53.63 ? C18 R78 201 A 1 HETATM 24 C C16 R78 . . . B 2 18.315 -0.989 -6.52 1 53.45 ? C16 R78 201 A 1 HETATM 25 O O3 R78 . . . B 2 17.771 0.257 -6.928 1 61.08 ? O3 R78 201 A 1 HETATM 26 C C31 R78 . . . B 2 16.906 0.195 -8.032 1 58.65 ? C31 R78 201 A 1 HETATM 27 C C19 R78 . . . B 2 19.227 -3.496 -5.623 1 52.13 ? C19 R78 201 A 1 HETATM 28 N N5 R78 . . . B 2 16.195 -1.659 -5.471 1 50.48 ? N5 R78 201 A 1 HETATM 29 C C1 R78 . . . B 2 15.251 -2.383 -4.621 1 42.34 ? C1 R78 201 A 1 HETATM 30 N N2 R78 . . . B 2 14.1 -1.655 -4.561 1 40.41 ? N2 R78 201 A 1 HETATM 31 C C2 R78 . . . B 2 13.108 -2.099 -3.866 1 38.79 ? C2 R78 201 A 1 HETATM 32 C C14 R78 . . . B 2 11.382 1.332 -6.397 1 49.55 ? C14 R78 201 A 1 HETATM 33 C C12 R78 . . . B 2 12.794 1.136 -4.493 1 44.98 ? C12 R78 201 A 1 HETATM 34 C C9 R78 . . . B 2 11.205 -0.394 -1.649 1 37.95 ? C9 R78 201 A 1 HETATM 35 O O1 R78 . . . B 2 9.833 -3.243 -1.641 1 37.03 ? O1 R78 201 A 1 HETATM 36 N N4 R78 . . . B 2 11.961 -3.717 -2.426 1 32.57 ? N4 R78 201 A 1 HETATM 37 C C11 R78 . . . B 2 11.942 -5.101 -1.939 1 32.94 ? C11 R78 201 A 1 HETATM 38 C C3 R78 . . . B 2 13.188 -3.284 -3.183 1 33.59 ? C3 R78 201 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #