data_7LB1 # _model_server_result.job_id hG4-E3Y7_KVxkF3mjoUczg _model_server_result.datetime_utc '2024-11-12 20:43:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1712}' # _entry.id 7LB1 # _exptl.entry_id 7LB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LB1 _cell.length_a 45.167 _cell.length_b 54.665 _cell.length_c 122.049 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7LB1 _atom_sites.fract_transf_matrix[1][1] 0.02214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008193 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1701 1 EDO EDO . C 2 EDO A 1 1702 201 EDO EDO . D 2 EDO A 1 1703 301 EDO EDO . E 2 EDO A 1 1704 701 EDO EDO . F 2 EDO A 1 1705 801 EDO EDO . G 2 EDO A 1 1706 901 EDO EDO . H 2 EDO A 1 1707 1001 EDO EDO . I 2 EDO A 1 1708 1101 EDO EDO . J 2 EDO A 1 1709 1301 EDO EDO . K 3 PEG A 1 1710 1401 PEG PEG . L 2 EDO A 1 1711 1701 EDO EDO . M 2 EDO A 1 1712 1801 EDO EDO . N 2 EDO A 1 1713 1901 EDO EDO . O 2 EDO A 1 1714 2001 EDO EDO . P 2 EDO A 1 1715 2101 EDO EDO . Q 2 EDO A 1 1716 2401 EDO EDO . R 2 EDO A 1 1717 2501 EDO EDO . S 2 EDO A 1 1718 2601 EDO EDO . T 2 EDO A 1 1719 2901 EDO EDO . U 4 XWV A 1 1720 1 XWV LIG . V 5 HOH A 1 1801 140 HOH HOH . V 5 HOH A 2 1802 183 HOH HOH . V 5 HOH A 3 1803 156 HOH HOH . V 5 HOH A 4 1804 144 HOH HOH . V 5 HOH A 5 1805 121 HOH HOH . V 5 HOH A 6 1806 139 HOH HOH . V 5 HOH A 7 1807 141 HOH HOH . V 5 HOH A 8 1808 122 HOH HOH . V 5 HOH A 9 1809 3 HOH HOH . V 5 HOH A 10 1810 73 HOH HOH . V 5 HOH A 11 1811 194 HOH HOH . V 5 HOH A 12 1812 130 HOH HOH . V 5 HOH A 13 1813 87 HOH HOH . V 5 HOH A 14 1814 65 HOH HOH . V 5 HOH A 15 1815 64 HOH HOH . V 5 HOH A 16 1816 80 HOH HOH . V 5 HOH A 17 1817 61 HOH HOH . V 5 HOH A 18 1818 35 HOH HOH . V 5 HOH A 19 1819 32 HOH HOH . V 5 HOH A 20 1820 137 HOH HOH . V 5 HOH A 21 1821 50 HOH HOH . V 5 HOH A 22 1822 18 HOH HOH . V 5 HOH A 23 1823 95 HOH HOH . V 5 HOH A 24 1824 129 HOH HOH . V 5 HOH A 25 1825 195 HOH HOH . V 5 HOH A 26 1826 58 HOH HOH . V 5 HOH A 27 1827 66 HOH HOH . V 5 HOH A 28 1828 157 HOH HOH . V 5 HOH A 29 1829 143 HOH HOH . V 5 HOH A 30 1830 160 HOH HOH . V 5 HOH A 31 1831 97 HOH HOH . V 5 HOH A 32 1832 15 HOH HOH . V 5 HOH A 33 1833 153 HOH HOH . V 5 HOH A 34 1834 38 HOH HOH . V 5 HOH A 35 1835 4 HOH HOH . V 5 HOH A 36 1836 171 HOH HOH . V 5 HOH A 37 1837 34 HOH HOH . V 5 HOH A 38 1838 115 HOH HOH . V 5 HOH A 39 1839 20 HOH HOH . V 5 HOH A 40 1840 52 HOH HOH . V 5 HOH A 41 1841 99 HOH HOH . V 5 HOH A 42 1842 107 HOH HOH . V 5 HOH A 43 1843 39 HOH HOH . V 5 HOH A 44 1844 11 HOH HOH . V 5 HOH A 45 1845 158 HOH HOH . V 5 HOH A 46 1846 101 HOH HOH . V 5 HOH A 47 1847 8 HOH HOH . V 5 HOH A 48 1848 192 HOH HOH . V 5 HOH A 49 1849 19 HOH HOH . V 5 HOH A 50 1850 102 HOH HOH . V 5 HOH A 51 1851 56 HOH HOH . V 5 HOH A 52 1852 13 HOH HOH . V 5 HOH A 53 1853 146 HOH HOH . V 5 HOH A 54 1854 53 HOH HOH . V 5 HOH A 55 1855 186 HOH HOH . V 5 HOH A 56 1856 55 HOH HOH . V 5 HOH A 57 1857 44 HOH HOH . V 5 HOH A 58 1858 127 HOH HOH . V 5 HOH A 59 1859 33 HOH HOH . V 5 HOH A 60 1860 48 HOH HOH . V 5 HOH A 61 1861 24 HOH HOH . V 5 HOH A 62 1862 31 HOH HOH . V 5 HOH A 63 1863 165 HOH HOH . V 5 HOH A 64 1864 67 HOH HOH . V 5 HOH A 65 1865 5 HOH HOH . V 5 HOH A 66 1866 26 HOH HOH . V 5 HOH A 67 1867 47 HOH HOH . V 5 HOH A 68 1868 10 HOH HOH . V 5 HOH A 69 1869 37 HOH HOH . V 5 HOH A 70 1870 7 HOH HOH . V 5 HOH A 71 1871 2 HOH HOH . V 5 HOH A 72 1872 180 HOH HOH . V 5 HOH A 73 1873 14 HOH HOH . V 5 HOH A 74 1874 74 HOH HOH . V 5 HOH A 75 1875 17 HOH HOH . V 5 HOH A 76 1876 117 HOH HOH . V 5 HOH A 77 1877 60 HOH HOH . V 5 HOH A 78 1878 116 HOH HOH . V 5 HOH A 79 1879 45 HOH HOH . V 5 HOH A 80 1880 108 HOH HOH . V 5 HOH A 81 1881 63 HOH HOH . V 5 HOH A 82 1882 22 HOH HOH . V 5 HOH A 83 1883 43 HOH HOH . V 5 HOH A 84 1884 70 HOH HOH . V 5 HOH A 85 1885 1 HOH HOH . V 5 HOH A 86 1886 90 HOH HOH . V 5 HOH A 87 1887 84 HOH HOH . V 5 HOH A 88 1888 185 HOH HOH . V 5 HOH A 89 1889 98 HOH HOH . V 5 HOH A 90 1890 23 HOH HOH . V 5 HOH A 91 1891 125 HOH HOH . V 5 HOH A 92 1892 83 HOH HOH . V 5 HOH A 93 1893 57 HOH HOH . V 5 HOH A 94 1894 151 HOH HOH . V 5 HOH A 95 1895 54 HOH HOH . V 5 HOH A 96 1896 191 HOH HOH . V 5 HOH A 97 1897 29 HOH HOH . V 5 HOH A 98 1898 49 HOH HOH . V 5 HOH A 99 1899 89 HOH HOH . V 5 HOH A 100 1900 9 HOH HOH . V 5 HOH A 101 1901 68 HOH HOH . V 5 HOH A 102 1902 16 HOH HOH . V 5 HOH A 103 1903 126 HOH HOH . V 5 HOH A 104 1904 21 HOH HOH . V 5 HOH A 105 1905 150 HOH HOH . V 5 HOH A 106 1906 28 HOH HOH . V 5 HOH A 107 1907 123 HOH HOH . V 5 HOH A 108 1908 62 HOH HOH . V 5 HOH A 109 1909 193 HOH HOH . V 5 HOH A 110 1910 77 HOH HOH . V 5 HOH A 111 1911 110 HOH HOH . V 5 HOH A 112 1912 111 HOH HOH . V 5 HOH A 113 1913 190 HOH HOH . V 5 HOH A 114 1914 75 HOH HOH . V 5 HOH A 115 1915 109 HOH HOH . V 5 HOH A 116 1916 132 HOH HOH . V 5 HOH A 117 1917 6 HOH HOH . V 5 HOH A 118 1918 166 HOH HOH . V 5 HOH A 119 1919 88 HOH HOH . V 5 HOH A 120 1920 46 HOH HOH . V 5 HOH A 121 1921 82 HOH HOH . V 5 HOH A 122 1922 178 HOH HOH . V 5 HOH A 123 1923 59 HOH HOH . V 5 HOH A 124 1924 85 HOH HOH . V 5 HOH A 125 1925 104 HOH HOH . V 5 HOH A 126 1926 124 HOH HOH . V 5 HOH A 127 1927 71 HOH HOH . V 5 HOH A 128 1928 78 HOH HOH . V 5 HOH A 129 1929 147 HOH HOH . V 5 HOH A 130 1930 94 HOH HOH . V 5 HOH A 131 1931 161 HOH HOH . V 5 HOH A 132 1932 201 HOH HOH . V 5 HOH A 133 1933 92 HOH HOH . V 5 HOH A 134 1934 105 HOH HOH . V 5 HOH A 135 1935 72 HOH HOH . V 5 HOH A 136 1936 112 HOH HOH . V 5 HOH A 137 1937 118 HOH HOH . V 5 HOH A 138 1938 96 HOH HOH . V 5 HOH A 139 1939 196 HOH HOH . V 5 HOH A 140 1940 128 HOH HOH . V 5 HOH A 141 1941 133 HOH HOH . V 5 HOH A 142 1942 179 HOH HOH . V 5 HOH A 143 1943 25 HOH HOH . V 5 HOH A 144 1944 173 HOH HOH . V 5 HOH A 145 1945 51 HOH HOH . V 5 HOH A 146 1946 12 HOH HOH . V 5 HOH A 147 1947 42 HOH HOH . V 5 HOH A 148 1948 91 HOH HOH . V 5 HOH A 149 1949 119 HOH HOH . V 5 HOH A 150 1950 197 HOH HOH . V 5 HOH A 151 1951 189 HOH HOH . V 5 HOH A 152 1952 27 HOH HOH . V 5 HOH A 153 1953 148 HOH HOH . V 5 HOH A 154 1954 135 HOH HOH . V 5 HOH A 155 1955 41 HOH HOH . V 5 HOH A 156 1956 36 HOH HOH . V 5 HOH A 157 1957 40 HOH HOH . V 5 HOH A 158 1958 154 HOH HOH . V 5 HOH A 159 1959 188 HOH HOH . V 5 HOH A 160 1960 86 HOH HOH . V 5 HOH A 161 1961 30 HOH HOH . V 5 HOH A 162 1962 93 HOH HOH . V 5 HOH A 163 1963 138 HOH HOH . V 5 HOH A 164 1964 76 HOH HOH . V 5 HOH A 165 1965 176 HOH HOH . V 5 HOH A 166 1966 159 HOH HOH . V 5 HOH A 167 1967 174 HOH HOH . V 5 HOH A 168 1968 136 HOH HOH . V 5 HOH A 169 1969 170 HOH HOH . V 5 HOH A 170 1970 198 HOH HOH . V 5 HOH A 171 1971 177 HOH HOH . V 5 HOH A 172 1972 169 HOH HOH . V 5 HOH A 173 1973 100 HOH HOH . V 5 HOH A 174 1974 145 HOH HOH . V 5 HOH A 175 1975 162 HOH HOH . V 5 HOH A 176 1976 81 HOH HOH . V 5 HOH A 177 1977 181 HOH HOH . V 5 HOH A 178 1978 182 HOH HOH . V 5 HOH A 179 1979 163 HOH HOH . V 5 HOH A 180 1980 199 HOH HOH . V 5 HOH A 181 1981 200 HOH HOH . V 5 HOH A 182 1982 155 HOH HOH . V 5 HOH A 183 1983 172 HOH HOH . V 5 HOH A 184 1984 106 HOH HOH . V 5 HOH A 185 1985 103 HOH HOH . V 5 HOH A 186 1986 149 HOH HOH . V 5 HOH A 187 1987 113 HOH HOH . V 5 HOH A 188 1988 134 HOH HOH . V 5 HOH A 189 1989 167 HOH HOH . V 5 HOH A 190 1990 164 HOH HOH . V 5 HOH A 191 1991 152 HOH HOH . V 5 HOH A 192 1992 69 HOH HOH . V 5 HOH A 193 1993 120 HOH HOH . V 5 HOH A 194 1994 187 HOH HOH . V 5 HOH A 195 1995 79 HOH HOH . V 5 HOH A 196 1996 168 HOH HOH . V 5 HOH A 197 1997 114 HOH HOH . V 5 HOH A 198 1998 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 2 -125.388 -143.488 120.465 1 29.93 ? C1 EDO 1712 A 1 HETATM 2 O O1 EDO . . . M 2 -124.875 -144.24 121.579 1 36.96 ? O1 EDO 1712 A 1 HETATM 3 C C2 EDO . . . M 2 -124.454 -143.566 119.239 1 59.03 ? C2 EDO 1712 A 1 HETATM 4 O O2 EDO . . . M 2 -124.78 -144.523 118.196 1 21.8 ? O2 EDO 1712 A 1 HETATM 5 H H11 EDO . . . M 2 -125.508 -142.444 120.76 1 35.91 ? H11 EDO 1712 A 1 HETATM 6 H H12 EDO . . . M 2 -126.373 -143.875 120.193 1 35.91 ? H12 EDO 1712 A 1 HETATM 7 H HO1 EDO . . . M 2 -125.45 -144.113 122.346 1 44.35 ? HO1 EDO 1712 A 1 HETATM 8 H H21 EDO . . . M 2 -124.424 -142.575 118.782 1 70.83 ? H21 EDO 1712 A 1 HETATM 9 H H22 EDO . . . M 2 -123.451 -143.8 119.601 1 70.83 ? H22 EDO 1712 A 1 HETATM 10 H HO2 EDO . . . M 2 -124.149 -144.435 117.469 1 26.16 ? HO2 EDO 1712 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #