data_7LCT # _model_server_result.job_id 5MnbHvARe0QVPiYMcizbbA _model_server_result.datetime_utc '2024-11-16 07:32:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lct # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7LCT # _exptl.entry_id 7LCT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 419.515 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[(1S)-1-phenylethoxy]carbonyl}-L-leucinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LCT _cell.length_a 45.661 _cell.length_b 63.384 _cell.length_c 104.918 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LCT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H33 N3 O5' _chem_comp.formula_weight 419.515 _chem_comp.id XU4 _chem_comp.mon_nstd_flag . _chem_comp.name N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[(1S)-1-phenylethoxy]carbonyl}-L-leucinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 XU4 doub 376 n y C26 C25 XU4 sing 377 n y C27 C28 XU4 sing 378 n y C25 C24 XU4 doub 379 n y C28 C29 XU4 doub 380 n y C24 C29 XU4 sing 381 n y C24 C22 XU4 sing 382 n n C22 C23 XU4 sing 383 n n C22 O21 XU4 sing 384 n n O21 C20 XU4 sing 385 n n N09 C08 XU4 sing 386 n n N09 C10 XU4 sing 387 n n O30 C20 XU4 doub 388 n n C20 N19 XU4 sing 389 n n C08 C07 XU4 sing 390 n n O11 C10 XU4 doub 391 n n C10 C06 XU4 sing 392 n n N19 C14 XU4 sing 393 n n C07 C06 XU4 sing 394 n n C06 C05 XU4 sing 395 n n C14 C02 XU4 sing 396 n n C14 C15 XU4 sing 397 n n O01 C02 XU4 doub 398 n n C02 N03 XU4 sing 399 n n C05 C04 XU4 sing 400 n n C15 C16 XU4 sing 401 n n N03 C04 XU4 sing 402 n n C17 C16 XU4 sing 403 n n C04 C12 XU4 sing 404 n n C16 C18 XU4 sing 405 n n C12 O13 XU4 sing 406 n n C15 H151 XU4 sing 407 n n C15 H152 XU4 sing 408 n n C17 H172 XU4 sing 409 n n C17 H173 XU4 sing 410 n n C17 H171 XU4 sing 411 n n C22 H221 XU4 sing 412 n n C26 H261 XU4 sing 413 n n C28 H281 XU4 sing 414 n n C04 H041 XU4 sing 415 n n C05 H052 XU4 sing 416 n n C05 H051 XU4 sing 417 n n C06 H061 XU4 sing 418 n n C07 H071 XU4 sing 419 n n C07 H072 XU4 sing 420 n n C08 H082 XU4 sing 421 n n C08 H081 XU4 sing 422 n n C12 H121 XU4 sing 423 n n C14 H141 XU4 sing 424 n n C16 H161 XU4 sing 425 n n C18 H181 XU4 sing 426 n n C18 H183 XU4 sing 427 n n C18 H182 XU4 sing 428 n n C23 H233 XU4 sing 429 n n C23 H231 XU4 sing 430 n n C23 H232 XU4 sing 431 n n C25 H251 XU4 sing 432 n n C27 H271 XU4 sing 433 n n C29 H291 XU4 sing 434 n n N03 H031 XU4 sing 435 n n N09 H091 XU4 sing 436 n n N19 H191 XU4 sing 437 n n C12 H1 XU4 sing 438 n n O13 H2 XU4 sing 439 n n # _atom_sites.entry_id 7LCT _atom_sites.fract_transf_matrix[1][1] 0.021901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015777 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XU4 A 1 401 401 XU4 LIG . C 3 HOH A 1 501 18 HOH HOH . C 3 HOH A 2 502 79 HOH HOH . C 3 HOH A 3 503 87 HOH HOH . C 3 HOH A 4 504 90 HOH HOH . C 3 HOH A 5 505 89 HOH HOH . C 3 HOH A 6 506 99 HOH HOH . C 3 HOH A 7 507 69 HOH HOH . C 3 HOH A 8 508 96 HOH HOH . C 3 HOH A 9 509 30 HOH HOH . C 3 HOH A 10 510 28 HOH HOH . C 3 HOH A 11 511 24 HOH HOH . C 3 HOH A 12 512 16 HOH HOH . C 3 HOH A 13 513 68 HOH HOH . C 3 HOH A 14 514 70 HOH HOH . C 3 HOH A 15 515 12 HOH HOH . C 3 HOH A 16 516 37 HOH HOH . C 3 HOH A 17 517 23 HOH HOH . C 3 HOH A 18 518 5 HOH HOH . C 3 HOH A 19 519 1 HOH HOH . C 3 HOH A 20 520 100 HOH HOH . C 3 HOH A 21 521 31 HOH HOH . C 3 HOH A 22 522 55 HOH HOH . C 3 HOH A 23 523 6 HOH HOH . C 3 HOH A 24 524 32 HOH HOH . C 3 HOH A 25 525 85 HOH HOH . C 3 HOH A 26 526 38 HOH HOH . C 3 HOH A 27 527 21 HOH HOH . C 3 HOH A 28 528 8 HOH HOH . C 3 HOH A 29 529 22 HOH HOH . C 3 HOH A 30 530 17 HOH HOH . C 3 HOH A 31 531 80 HOH HOH . C 3 HOH A 32 532 91 HOH HOH . C 3 HOH A 33 533 15 HOH HOH . C 3 HOH A 34 534 2 HOH HOH . C 3 HOH A 35 535 50 HOH HOH . C 3 HOH A 36 536 20 HOH HOH . C 3 HOH A 37 537 78 HOH HOH . C 3 HOH A 38 538 3 HOH HOH . C 3 HOH A 39 539 4 HOH HOH . C 3 HOH A 40 540 49 HOH HOH . C 3 HOH A 41 541 10 HOH HOH . C 3 HOH A 42 542 65 HOH HOH . C 3 HOH A 43 543 7 HOH HOH . C 3 HOH A 44 544 14 HOH HOH . C 3 HOH A 45 545 39 HOH HOH . C 3 HOH A 46 546 13 HOH HOH . C 3 HOH A 47 547 26 HOH HOH . C 3 HOH A 48 548 11 HOH HOH . C 3 HOH A 49 549 74 HOH HOH . C 3 HOH A 50 550 54 HOH HOH . C 3 HOH A 51 551 53 HOH HOH . C 3 HOH A 52 552 57 HOH HOH . C 3 HOH A 53 553 51 HOH HOH . C 3 HOH A 54 554 29 HOH HOH . C 3 HOH A 55 555 36 HOH HOH . C 3 HOH A 56 556 25 HOH HOH . C 3 HOH A 57 557 103 HOH HOH . C 3 HOH A 58 558 9 HOH HOH . C 3 HOH A 59 559 94 HOH HOH . C 3 HOH A 60 560 73 HOH HOH . C 3 HOH A 61 561 45 HOH HOH . C 3 HOH A 62 562 19 HOH HOH . C 3 HOH A 63 563 81 HOH HOH . C 3 HOH A 64 564 43 HOH HOH . C 3 HOH A 65 565 60 HOH HOH . C 3 HOH A 66 566 107 HOH HOH . C 3 HOH A 67 567 33 HOH HOH . C 3 HOH A 68 568 97 HOH HOH . C 3 HOH A 69 569 40 HOH HOH . C 3 HOH A 70 570 42 HOH HOH . C 3 HOH A 71 571 34 HOH HOH . C 3 HOH A 72 572 59 HOH HOH . C 3 HOH A 73 573 76 HOH HOH . C 3 HOH A 74 574 93 HOH HOH . C 3 HOH A 75 575 41 HOH HOH . C 3 HOH A 76 576 48 HOH HOH . C 3 HOH A 77 577 64 HOH HOH . C 3 HOH A 78 578 66 HOH HOH . C 3 HOH A 79 579 86 HOH HOH . C 3 HOH A 80 580 98 HOH HOH . C 3 HOH A 81 581 109 HOH HOH . C 3 HOH A 82 582 95 HOH HOH . C 3 HOH A 83 583 58 HOH HOH . C 3 HOH A 84 584 35 HOH HOH . C 3 HOH A 85 585 101 HOH HOH . C 3 HOH A 86 586 46 HOH HOH . C 3 HOH A 87 587 75 HOH HOH . C 3 HOH A 88 588 83 HOH HOH . C 3 HOH A 89 589 67 HOH HOH . C 3 HOH A 90 590 52 HOH HOH . C 3 HOH A 91 591 71 HOH HOH . C 3 HOH A 92 592 102 HOH HOH . C 3 HOH A 93 593 61 HOH HOH . C 3 HOH A 94 594 88 HOH HOH . C 3 HOH A 95 595 105 HOH HOH . C 3 HOH A 96 596 47 HOH HOH . C 3 HOH A 97 597 108 HOH HOH . C 3 HOH A 98 598 82 HOH HOH . C 3 HOH A 99 599 104 HOH HOH . C 3 HOH A 100 600 63 HOH HOH . C 3 HOH A 101 601 62 HOH HOH . C 3 HOH A 102 602 92 HOH HOH . C 3 HOH A 103 603 56 HOH HOH . C 3 HOH A 104 604 84 HOH HOH . C 3 HOH A 105 605 110 HOH HOH . C 3 HOH A 106 606 77 HOH HOH . C 3 HOH A 107 607 27 HOH HOH . C 3 HOH A 108 608 106 HOH HOH . C 3 HOH A 109 609 44 HOH HOH . C 3 HOH A 110 610 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XU4 . . . B 2 -16.145 10.562 -27.462 1 37.36 ? C10 XU4 401 A 1 HETATM 2 C C15 XU4 . . . B 2 -20.233 16.112 -24.774 1 47.16 ? C15 XU4 401 A 1 HETATM 3 C C17 XU4 . . . B 2 -18.79 18.207 -24.658 1 46.11 ? C17 XU4 401 A 1 HETATM 4 C C20 XU4 . . . B 2 -19.268 14.996 -28.134 1 39.14 ? C20 XU4 401 A 1 HETATM 5 C C22 XU4 . . . B 2 -19.728 14.336 -30.362 1 42.65 ? C22 XU4 401 A 1 HETATM 6 C C24 XU4 . . . B 2 -20.289 15.018 -31.596 1 41.14 ? C24 XU4 401 A 1 HETATM 7 C C26 XU4 . . . B 2 -20.32 15.533 -33.991 1 45.95 ? C26 XU4 401 A 1 HETATM 8 C C28 XU4 . . . B 2 -22.03 16.497 -32.494 1 48.11 ? C28 XU4 401 A 1 HETATM 9 C C02 XU4 . . . B 2 -19.118 13.964 -25.302 1 40.01 ? C02 XU4 401 A 1 HETATM 10 C C04 XU4 . . . B 2 -17.77 12.108 -24.358 1 35.68 ? C04 XU4 401 A 1 HETATM 11 C C05 XU4 . . . B 2 -16.679 11.381 -25.129 1 36.98 ? C05 XU4 401 A 1 HETATM 12 C C06 XU4 . . . B 2 -17.188 11.205 -26.605 1 36.27 ? C06 XU4 401 A 1 HETATM 13 C C07 XU4 . . . B 2 -18.427 10.352 -26.662 1 32.48 ? C07 XU4 401 A 1 HETATM 14 C C08 XU4 . . . B 2 -18.319 9.63 -28.016 1 33.92 ? C08 XU4 401 A 1 HETATM 15 C C12 XU4 . . . B 2 -17.565 12.141 -22.84 1 35.28 ? C12 XU4 401 A 1 HETATM 16 C C14 XU4 . . . B 2 -19.208 15.436 -25.672 1 43.21 ? C14 XU4 401 A 1 HETATM 17 C C16 XU4 . . . B 2 -19.747 17.281 -23.958 1 53.57 ? C16 XU4 401 A 1 HETATM 18 C C18 XU4 . . . B 2 -20.928 18.21 -23.667 1 51.92 ? C18 XU4 401 A 1 HETATM 19 C C23 XU4 . . . B 2 -20.357 12.95 -30.23 1 44.69 ? C23 XU4 401 A 1 HETATM 20 C C25 XU4 . . . B 2 -19.725 14.841 -32.776 1 40.52 ? C25 XU4 401 A 1 HETATM 21 C C27 XU4 . . . B 2 -21.394 16.289 -33.862 1 42.69 ? C27 XU4 401 A 1 HETATM 22 C C29 XU4 . . . B 2 -21.519 15.897 -31.435 1 42.7 ? C29 XU4 401 A 1 HETATM 23 N N03 XU4 . . . B 2 -17.869 13.497 -24.747 1 36.14 ? N03 XU4 401 A 1 HETATM 24 N N09 XU4 . . . B 2 -16.831 9.598 -28.342 1 32.54 ? N09 XU4 401 A 1 HETATM 25 N N19 XU4 . . . B 2 -19.76 15.673 -26.971 1 36.37 ? N19 XU4 401 A 1 HETATM 26 O O01 XU4 . . . B 2 -20.025 13.208 -25.473 1 31.37 ? O01 XU4 401 A 1 HETATM 27 O O11 XU4 . . . B 2 -14.984 10.768 -27.471 1 35.62 ? O11 XU4 401 A 1 HETATM 28 O O13 XU4 . . . B 2 -17.511 11.114 -22.247 1 42.14 ? O13 XU4 401 A 1 HETATM 29 O O21 XU4 . . . B 2 -20.137 15.022 -29.212 1 38.73 ? O21 XU4 401 A 1 HETATM 30 O O30 XU4 . . . B 2 -18.18 14.505 -28.179 1 36.55 ? O30 XU4 401 A 1 HETATM 31 H H151 XU4 . . . B 2 -20.571 15.443 -24.159 1 56.64 ? H151 XU4 401 A 1 HETATM 32 H H152 XU4 . . . B 2 -20.956 16.427 -25.339 1 56.64 ? H152 XU4 401 A 1 HETATM 33 H H172 XU4 . . . B 2 -17.938 17.761 -24.779 1 55.37 ? H172 XU4 401 A 1 HETATM 34 H H173 XU4 . . . B 2 -18.665 19.006 -24.124 1 55.37 ? H173 XU4 401 A 1 HETATM 35 H H171 XU4 . . . B 2 -19.152 18.451 -25.525 1 55.37 ? H171 XU4 401 A 1 HETATM 36 H H221 XU4 . . . B 2 -18.762 14.308 -30.447 1 51.22 ? H221 XU4 401 A 1 HETATM 37 H H261 XU4 . . . B 2 -19.928 15.423 -34.827 1 55.18 ? H261 XU4 401 A 1 HETATM 38 H H281 XU4 . . . B 2 -22.776 17.045 -32.405 1 57.78 ? H281 XU4 401 A 1 HETATM 39 H H041 XU4 . . . B 2 -18.564 11.596 -24.575 1 42.86 ? H041 XU4 401 A 1 HETATM 40 H H052 XU4 . . . B 2 -15.862 11.903 -25.119 1 44.41 ? H052 XU4 401 A 1 HETATM 41 H H051 XU4 . . . B 2 -16.513 10.513 -24.73 1 44.41 ? H051 XU4 401 A 1 HETATM 42 H H061 XU4 . . . B 2 -17.386 12.096 -26.933 1 43.57 ? H061 XU4 401 A 1 HETATM 43 H H071 XU4 . . . B 2 -18.434 9.712 -25.934 1 39.01 ? H071 XU4 401 A 1 HETATM 44 H H072 XU4 . . . B 2 -19.223 10.905 -26.632 1 39.01 ? H072 XU4 401 A 1 HETATM 45 H H082 XU4 . . . B 2 -18.666 8.727 -27.943 1 40.74 ? H082 XU4 401 A 1 HETATM 46 H H081 XU4 . . . B 2 -18.801 10.124 -28.699 1 40.74 ? H081 XU4 401 A 1 HETATM 47 H H141 XU4 . . . B 2 -18.297 15.763 -25.604 1 51.89 ? H141 XU4 401 A 1 HETATM 48 H H161 XU4 . . . B 2 -19.318 16.863 -23.195 1 64.32 ? H161 XU4 401 A 1 HETATM 49 H H181 XU4 . . . B 2 -21.2 18.653 -24.486 1 62.35 ? H181 XU4 401 A 1 HETATM 50 H H183 XU4 . . . B 2 -20.662 18.875 -23.013 1 62.35 ? H183 XU4 401 A 1 HETATM 51 H H182 XU4 . . . B 2 -21.669 17.691 -23.318 1 62.35 ? H182 XU4 401 A 1 HETATM 52 H H233 XU4 . . . B 2 -21.161 13.01 -29.691 1 53.67 ? H233 XU4 401 A 1 HETATM 53 H H231 XU4 . . . B 2 -19.726 12.349 -29.804 1 53.67 ? H231 XU4 401 A 1 HETATM 54 H H232 XU4 . . . B 2 -20.582 12.612 -31.11 1 53.67 ? H232 XU4 401 A 1 HETATM 55 H H251 XU4 . . . B 2 -18.973 14.301 -32.863 1 48.66 ? H251 XU4 401 A 1 HETATM 56 H H271 XU4 . . . B 2 -21.765 16.697 -34.611 1 51.27 ? H271 XU4 401 A 1 HETATM 57 H H291 XU4 . . . B 2 -21.908 16.011 -30.598 1 51.28 ? H291 XU4 401 A 1 HETATM 58 H H031 XU4 . . . B 2 -17.202 14.031 -24.651 1 43.4 ? H031 XU4 401 A 1 HETATM 59 H H091 XU4 . . . B 2 -16.456 9.104 -28.937 1 39.08 ? H091 XU4 401 A 1 HETATM 60 H H191 XU4 . . . B 2 -20.404 16.237 -27.056 1 43.68 ? H191 XU4 401 A 1 HETATM 61 H H1 XU4 . . . B 2 -17.485 12.952 -22.391 1 42.38 ? H1 XU4 401 A 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 61 #