data_7LEM # _model_server_result.job_id 1jI9Aw5l4WAQVvLTH58TAg _model_server_result.datetime_utc '2024-11-05 11:40:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lem # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 7LEM # _exptl.entry_id 7LEM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.56 _cell.angle_gamma 90 _cell.entry_id 7LEM _cell.length_a 69.22 _cell.length_b 30.02 _cell.length_c 72.84 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LEM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 168 n n C1 C2 EDO sing 169 n n C1 H11 EDO sing 170 n n C1 H12 EDO sing 171 n n O1 HO1 EDO sing 172 n n C2 O2 EDO sing 173 n n C2 H21 EDO sing 174 n n C2 H22 EDO sing 175 n n O2 HO2 EDO sing 176 n n # _atom_sites.entry_id 7LEM _atom_sites.fract_transf_matrix[1][1] 0.014447 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003753 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 4K4 A 1 201 2 4K4 4K4 . D 3 EDO A 1 202 1 EDO EDO . E 3 EDO A 1 203 2 EDO EDO . F 3 EDO A 1 204 5 EDO EDO . G 3 EDO A 1 205 7 EDO EDO . H 3 EDO A 1 206 9 EDO EDO . I 2 4K4 B 1 201 1 4K4 4K4 . J 3 EDO B 1 202 3 EDO EDO . K 3 EDO B 1 203 4 EDO EDO . L 3 EDO B 1 204 6 EDO EDO . M 3 EDO B 1 205 8 EDO EDO . N 3 EDO B 1 206 10 EDO EDO . O 4 HOH A 1 301 79 HOH HOH . O 4 HOH A 2 302 81 HOH HOH . O 4 HOH A 3 303 47 HOH HOH . O 4 HOH A 4 304 82 HOH HOH . O 4 HOH A 5 305 10 HOH HOH . O 4 HOH A 6 306 52 HOH HOH . O 4 HOH A 7 307 97 HOH HOH . O 4 HOH A 8 308 34 HOH HOH . O 4 HOH A 9 309 33 HOH HOH . O 4 HOH A 10 310 17 HOH HOH . O 4 HOH A 11 311 93 HOH HOH . O 4 HOH A 12 312 26 HOH HOH . O 4 HOH A 13 313 44 HOH HOH . O 4 HOH A 14 314 49 HOH HOH . O 4 HOH A 15 315 13 HOH HOH . O 4 HOH A 16 316 1 HOH HOH . O 4 HOH A 17 317 63 HOH HOH . O 4 HOH A 18 318 42 HOH HOH . O 4 HOH A 19 319 18 HOH HOH . O 4 HOH A 20 320 32 HOH HOH . O 4 HOH A 21 321 35 HOH HOH . O 4 HOH A 22 322 28 HOH HOH . O 4 HOH A 23 323 6 HOH HOH . O 4 HOH A 24 324 25 HOH HOH . O 4 HOH A 25 325 43 HOH HOH . O 4 HOH A 26 326 3 HOH HOH . O 4 HOH A 27 327 77 HOH HOH . O 4 HOH A 28 328 36 HOH HOH . O 4 HOH A 29 329 37 HOH HOH . O 4 HOH A 30 330 85 HOH HOH . O 4 HOH A 31 331 31 HOH HOH . O 4 HOH A 32 332 94 HOH HOH . O 4 HOH A 33 333 21 HOH HOH . O 4 HOH A 34 334 29 HOH HOH . O 4 HOH A 35 335 83 HOH HOH . O 4 HOH A 36 336 91 HOH HOH . O 4 HOH A 37 337 5 HOH HOH . O 4 HOH A 38 338 11 HOH HOH . O 4 HOH A 39 339 62 HOH HOH . O 4 HOH A 40 340 95 HOH HOH . O 4 HOH A 41 341 53 HOH HOH . O 4 HOH A 42 342 78 HOH HOH . O 4 HOH A 43 343 55 HOH HOH . O 4 HOH A 44 344 74 HOH HOH . O 4 HOH A 45 345 22 HOH HOH . O 4 HOH A 46 346 70 HOH HOH . O 4 HOH A 47 347 98 HOH HOH . O 4 HOH A 48 348 64 HOH HOH . P 4 HOH B 1 301 56 HOH HOH . P 4 HOH B 2 302 61 HOH HOH . P 4 HOH B 3 303 75 HOH HOH . P 4 HOH B 4 304 27 HOH HOH . P 4 HOH B 5 305 7 HOH HOH . P 4 HOH B 6 306 66 HOH HOH . P 4 HOH B 7 307 51 HOH HOH . P 4 HOH B 8 308 12 HOH HOH . P 4 HOH B 9 309 69 HOH HOH . P 4 HOH B 10 310 48 HOH HOH . P 4 HOH B 11 311 67 HOH HOH . P 4 HOH B 12 312 9 HOH HOH . P 4 HOH B 13 313 72 HOH HOH . P 4 HOH B 14 314 40 HOH HOH . P 4 HOH B 15 315 76 HOH HOH . P 4 HOH B 16 316 2 HOH HOH . P 4 HOH B 17 317 88 HOH HOH . P 4 HOH B 18 318 45 HOH HOH . P 4 HOH B 19 319 39 HOH HOH . P 4 HOH B 20 320 23 HOH HOH . P 4 HOH B 21 321 60 HOH HOH . P 4 HOH B 22 322 19 HOH HOH . P 4 HOH B 23 323 46 HOH HOH . P 4 HOH B 24 324 57 HOH HOH . P 4 HOH B 25 325 65 HOH HOH . P 4 HOH B 26 326 87 HOH HOH . P 4 HOH B 27 327 30 HOH HOH . P 4 HOH B 28 328 59 HOH HOH . P 4 HOH B 29 329 20 HOH HOH . P 4 HOH B 30 330 14 HOH HOH . P 4 HOH B 31 331 38 HOH HOH . P 4 HOH B 32 332 15 HOH HOH . P 4 HOH B 33 333 89 HOH HOH . P 4 HOH B 34 334 84 HOH HOH . P 4 HOH B 35 335 90 HOH HOH . P 4 HOH B 36 336 58 HOH HOH . P 4 HOH B 37 337 92 HOH HOH . P 4 HOH B 38 338 73 HOH HOH . P 4 HOH B 39 339 80 HOH HOH . P 4 HOH B 40 340 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 3 -26.429 -2.562 -30.473 1 32.06 ? C1 EDO 205 A 1 HETATM 2 O O1 EDO . . . G 3 -25.164 -2.569 -31.186 1 25.08 ? O1 EDO 205 A 1 HETATM 3 C C2 EDO . . . G 3 -26.681 -1.195 -29.815 1 39.98 ? C2 EDO 205 A 1 HETATM 4 O O2 EDO . . . G 3 -26.646 -0.165 -30.802 1 29.81 ? O2 EDO 205 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 179 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #