data_7LEP # _model_server_result.job_id tndzNY2gUEkfnQGNXZY8qA _model_server_result.datetime_utc '2025-07-04 15:04:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":902}' # _entry.id 7LEP # _exptl.entry_id 7LEP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 142.282 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LEP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id Z _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 315 A CYS 714 1_555 A SG CYS 370 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 B SG CYS 323 B CYS 718 1_555 B SG CYS 378 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 C SG CYS 314 C CYS 714 1_555 C SG CYS 369 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 D SG CYS 323 D CYS 718 1_555 D SG CYS 378 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 G SG CYS 72 G CYS 90 1_555 G SG CYS 82 G CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 H SG CYS 72 H CYS 90 1_555 H SG CYS 82 H CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C10 H22' _chem_comp.formula_weight 142.282 _chem_comp.id D10 _chem_comp.mon_nstd_flag . _chem_comp.name DECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 D10 sing 126 n n C1 H11 D10 sing 127 n n C1 H12 D10 sing 128 n n C1 H13 D10 sing 129 n n C2 C3 D10 sing 130 n n C2 H21 D10 sing 131 n n C2 H22 D10 sing 132 n n C3 C4 D10 sing 133 n n C3 H31 D10 sing 134 n n C3 H32 D10 sing 135 n n C4 C5 D10 sing 136 n n C4 H41 D10 sing 137 n n C4 H42 D10 sing 138 n n C5 C6 D10 sing 139 n n C5 H51 D10 sing 140 n n C5 H52 D10 sing 141 n n C6 C7 D10 sing 142 n n C6 H61 D10 sing 143 n n C6 H62 D10 sing 144 n n C7 C8 D10 sing 145 n n C7 H71 D10 sing 146 n n C7 H72 D10 sing 147 n n C8 C9 D10 sing 148 n n C8 H81 D10 sing 149 n n C8 H82 D10 sing 150 n n C9 C10 D10 sing 151 n n C9 H91 D10 sing 152 n n C9 H92 D10 sing 153 n n C10 H101 D10 sing 154 n n C10 H102 D10 sing 155 n n C10 H103 D10 sing 156 n n # _atom_sites.entry_id 7LEP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 6 ZK1 A 1 901 901 ZK1 ZK1 . J 7 POV A 1 902 32 POV CXC . K 7 POV A 1 903 34 POV CXC . L 7 POV A 1 904 35 POV CXC . M 7 POV A 1 905 36 POV CXC . N 7 POV A 1 906 52 POV CXC . O 7 POV A 1 907 53 POV CXC . P 7 POV A 1 908 58 POV CXC . Q 7 POV A 1 909 59 POV CXC . R 6 ZK1 B 1 901 901 ZK1 ZK1 . S 7 POV B 1 902 1001 POV POV . T 8 C14 B 1 903 904 C14 C14 . U 7 POV B 1 904 30 POV CXC . V 7 POV B 1 905 31 POV CXC . W 7 POV B 1 906 51 POV CXC . X 7 POV B 1 907 54 POV CXC . Y 6 ZK1 C 1 901 901 ZK1 ZK1 . Z 9 D10 C 1 902 907 D10 D10 . AA 7 POV C 1 903 1301 POV CXC . BA 7 POV C 1 904 50 POV CXC . CA 7 POV C 1 905 55 POV CXC . DA 7 POV C 1 906 56 POV CXC . EA 7 POV C 1 907 57 POV CXC . FA 7 POV C 1 908 61 POV CXC . GA 7 POV C 1 909 62 POV CXC . HA 6 ZK1 D 1 901 901 ZK1 ZK1 . IA 7 POV D 1 902 1001 POV POV . JA 7 POV D 1 903 37 POV CXC . KA 7 POV D 1 904 40 POV CXC . LA 7 POV D 1 905 41 POV CXC . MA 7 POV D 1 906 48 POV CXC . NA 7 POV D 1 907 60 POV CXC . OA 7 POV E 1 201 45 POV CXC . PA 7 POV F 1 201 47 POV CXC . QA 10 XVD G 1 501 501 XVD LIG . RA 11 OCT G 1 502 504 OCT OCT . SA 12 D12 G 1 503 902 D12 D12 . TA 7 POV G 1 504 43 POV CXC . UA 10 XVD H 1 501 501 XVD LIG . VA 11 OCT H 1 502 504 OCT OCT . WA 12 D12 H 1 503 902 D12 D12 . XA 7 POV H 1 504 42 POV CXC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D10 . . . Z 9 210.747 201.087 148.019 1 21.54 ? C1 D10 902 C 1 HETATM 2 C C2 D10 . . . Z 9 211.319 200.713 146.657 1 21.54 ? C2 D10 902 C 1 HETATM 3 C C3 D10 . . . Z 9 210.702 201.511 145.511 1 21.54 ? C3 D10 902 C 1 HETATM 4 C C4 D10 . . . Z 9 211.548 202.72 145.126 1 21.54 ? C4 D10 902 C 1 HETATM 5 C C5 D10 . . . Z 9 211.563 203.021 143.63 1 21.54 ? C5 D10 902 C 1 HETATM 6 C C6 D10 . . . Z 9 212.563 204.122 143.287 1 21.54 ? C6 D10 902 C 1 HETATM 7 C C7 D10 . . . Z 9 212.506 204.541 141.822 1 21.54 ? C7 D10 902 C 1 HETATM 8 C C8 D10 . . . Z 9 212.074 205.99 141.619 1 21.54 ? C8 D10 902 C 1 HETATM 9 C C9 D10 . . . Z 9 212.542 206.561 140.281 1 21.54 ? C9 D10 902 C 1 HETATM 10 C C10 D10 . . . Z 9 211.479 206.556 139.182 1 21.54 ? C10 D10 902 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 453 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #