data_7LFP # _model_server_result.job_id TwswZWQlqId7L2aqsJns2Q _model_server_result.datetime_utc '2024-11-06 00:01:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":407}' # _entry.id 7LFP # _exptl.entry_id 7LFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LFP _cell.length_a 67.648 _cell.length_b 101.186 _cell.length_c 102.165 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N ? 2 M N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7LFP _atom_sites.fract_transf_matrix[1][1] 0.014782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 401 401 DMS DMS . D 3 PEG A 1 402 402 PEG PEG . E 2 DMS A 1 403 405 DMS DMS . F 2 DMS A 1 404 406 DMS DMS . G 2 DMS A 1 405 407 DMS DMS . H 4 XY4 A 1 406 701 XY4 LIG . I 2 DMS A 1 407 504 DMS DMS . J 3 PEG B 1 401 403 PEG PEG . K 3 PEG B 1 402 501 PEG PEG . L 3 PEG B 1 403 502 PEG PEG . M 2 DMS B 1 404 503 DMS DMS . N 5 HOH A 1 501 503 HOH HOH . N 5 HOH A 2 502 519 HOH HOH . N 5 HOH A 3 503 630 HOH HOH . N 5 HOH A 4 504 506 HOH HOH . N 5 HOH A 5 505 520 HOH HOH . N 5 HOH A 6 506 509 HOH HOH . N 5 HOH A 7 507 505 HOH HOH . N 5 HOH A 8 508 525 HOH HOH . N 5 HOH A 9 509 527 HOH HOH . N 5 HOH A 10 510 547 HOH HOH . N 5 HOH A 11 511 545 HOH HOH . N 5 HOH A 12 512 540 HOH HOH . N 5 HOH A 13 513 534 HOH HOH . N 5 HOH A 14 514 539 HOH HOH . N 5 HOH A 15 515 508 HOH HOH . N 5 HOH A 16 516 507 HOH HOH . N 5 HOH A 17 517 516 HOH HOH . N 5 HOH A 18 518 537 HOH HOH . N 5 HOH A 19 519 561 HOH HOH . N 5 HOH A 20 520 504 HOH HOH . N 5 HOH A 21 521 511 HOH HOH . N 5 HOH A 22 522 513 HOH HOH . N 5 HOH A 23 523 514 HOH HOH . N 5 HOH A 24 524 518 HOH HOH . N 5 HOH A 25 525 531 HOH HOH . N 5 HOH A 26 526 528 HOH HOH . N 5 HOH A 27 527 510 HOH HOH . N 5 HOH A 28 528 529 HOH HOH . N 5 HOH A 29 529 517 HOH HOH . N 5 HOH A 30 530 542 HOH HOH . N 5 HOH A 31 531 564 HOH HOH . N 5 HOH A 32 532 553 HOH HOH . N 5 HOH A 33 533 555 HOH HOH . N 5 HOH A 34 534 574 HOH HOH . N 5 HOH A 35 535 535 HOH HOH . N 5 HOH A 36 536 526 HOH HOH . N 5 HOH A 37 537 549 HOH HOH . N 5 HOH A 38 538 548 HOH HOH . N 5 HOH A 39 539 522 HOH HOH . N 5 HOH A 40 540 521 HOH HOH . N 5 HOH A 41 541 562 HOH HOH . N 5 HOH A 42 542 556 HOH HOH . N 5 HOH A 43 543 551 HOH HOH . N 5 HOH A 44 544 532 HOH HOH . N 5 HOH A 45 545 595 HOH HOH . N 5 HOH A 46 546 554 HOH HOH . N 5 HOH A 47 547 648 HOH HOH . N 5 HOH A 48 548 546 HOH HOH . N 5 HOH A 49 549 582 HOH HOH . N 5 HOH A 50 550 543 HOH HOH . N 5 HOH A 51 551 523 HOH HOH . N 5 HOH A 52 552 585 HOH HOH . N 5 HOH A 53 553 571 HOH HOH . N 5 HOH A 54 554 557 HOH HOH . N 5 HOH A 55 555 566 HOH HOH . N 5 HOH A 56 556 538 HOH HOH . N 5 HOH A 57 557 533 HOH HOH . N 5 HOH A 58 558 512 HOH HOH . N 5 HOH A 59 559 544 HOH HOH . N 5 HOH A 60 560 572 HOH HOH . N 5 HOH A 61 561 591 HOH HOH . N 5 HOH A 62 562 598 HOH HOH . N 5 HOH A 63 563 579 HOH HOH . N 5 HOH A 64 564 569 HOH HOH . N 5 HOH A 65 565 558 HOH HOH . N 5 HOH A 66 566 563 HOH HOH . N 5 HOH A 67 567 588 HOH HOH . N 5 HOH A 68 568 550 HOH HOH . N 5 HOH A 69 569 607 HOH HOH . N 5 HOH A 70 570 570 HOH HOH . N 5 HOH A 71 571 617 HOH HOH . N 5 HOH A 72 572 614 HOH HOH . N 5 HOH A 73 573 560 HOH HOH . N 5 HOH A 74 574 603 HOH HOH . N 5 HOH A 75 575 587 HOH HOH . N 5 HOH A 76 576 589 HOH HOH . N 5 HOH A 77 577 605 HOH HOH . N 5 HOH A 78 578 568 HOH HOH . N 5 HOH A 79 579 559 HOH HOH . N 5 HOH A 80 580 601 HOH HOH . N 5 HOH A 81 581 573 HOH HOH . N 5 HOH A 82 582 580 HOH HOH . N 5 HOH A 83 583 647 HOH HOH . N 5 HOH A 84 584 602 HOH HOH . N 5 HOH A 85 585 609 HOH HOH . N 5 HOH A 86 586 576 HOH HOH . N 5 HOH A 87 587 608 HOH HOH . N 5 HOH A 88 588 651 HOH HOH . N 5 HOH A 89 589 632 HOH HOH . N 5 HOH A 90 590 575 HOH HOH . N 5 HOH A 91 591 616 HOH HOH . N 5 HOH A 92 592 594 HOH HOH . N 5 HOH A 93 593 586 HOH HOH . N 5 HOH A 94 594 600 HOH HOH . N 5 HOH A 95 595 621 HOH HOH . N 5 HOH A 96 596 597 HOH HOH . N 5 HOH A 97 597 604 HOH HOH . N 5 HOH A 98 598 611 HOH HOH . N 5 HOH A 99 599 584 HOH HOH . N 5 HOH A 100 600 581 HOH HOH . N 5 HOH A 101 601 622 HOH HOH . N 5 HOH A 102 602 634 HOH HOH . N 5 HOH A 103 603 593 HOH HOH . N 5 HOH A 104 604 616 HOH HOH . N 5 HOH A 105 605 631 HOH HOH . N 5 HOH A 106 606 590 HOH HOH . N 5 HOH A 107 607 592 HOH HOH . N 5 HOH A 108 608 629 HOH HOH . N 5 HOH A 109 609 627 HOH HOH . N 5 HOH A 110 610 596 HOH HOH . N 5 HOH A 111 611 606 HOH HOH . N 5 HOH A 112 612 801 HOH HOH . N 5 HOH A 113 613 628 HOH HOH . N 5 HOH A 114 614 612 HOH HOH . N 5 HOH A 115 615 615 HOH HOH . N 5 HOH A 116 616 672 HOH HOH . N 5 HOH A 117 617 623 HOH HOH . N 5 HOH A 118 618 632 HOH HOH . N 5 HOH A 119 619 599 HOH HOH . N 5 HOH A 120 620 625 HOH HOH . N 5 HOH A 121 621 530 HOH HOH . N 5 HOH A 122 622 638 HOH HOH . N 5 HOH A 123 623 565 HOH HOH . N 5 HOH A 124 624 633 HOH HOH . N 5 HOH A 125 625 687 HOH HOH . N 5 HOH A 126 626 610 HOH HOH . N 5 HOH A 127 627 636 HOH HOH . N 5 HOH A 128 628 635 HOH HOH . N 5 HOH A 129 629 583 HOH HOH . N 5 HOH A 130 630 613 HOH HOH . N 5 HOH A 131 631 619 HOH HOH . N 5 HOH A 132 632 689 HOH HOH . N 5 HOH A 133 633 624 HOH HOH . N 5 HOH A 134 634 642 HOH HOH . N 5 HOH A 135 635 639 HOH HOH . N 5 HOH A 136 636 641 HOH HOH . N 5 HOH A 137 637 643 HOH HOH . N 5 HOH A 138 638 640 HOH HOH . N 5 HOH A 139 639 645 HOH HOH . N 5 HOH A 140 640 647 HOH HOH . N 5 HOH A 141 641 644 HOH HOH . N 5 HOH A 142 642 648 HOH HOH . N 5 HOH A 143 643 578 HOH HOH . N 5 HOH A 144 644 690 HOH HOH . N 5 HOH A 145 645 646 HOH HOH . N 5 HOH A 146 646 649 HOH HOH . N 5 HOH A 147 647 650 HOH HOH . N 5 HOH A 148 648 651 HOH HOH . N 5 HOH A 149 649 652 HOH HOH . N 5 HOH A 150 650 653 HOH HOH . O 5 HOH B 1 501 606 HOH HOH . O 5 HOH B 2 502 515 HOH HOH . O 5 HOH B 3 503 602 HOH HOH . O 5 HOH B 4 504 679 HOH HOH . O 5 HOH B 5 505 603 HOH HOH . O 5 HOH B 6 506 613 HOH HOH . O 5 HOH B 7 507 614 HOH HOH . O 5 HOH B 8 508 605 HOH HOH . O 5 HOH B 9 509 618 HOH HOH . O 5 HOH B 10 510 615 HOH HOH . O 5 HOH B 11 511 610 HOH HOH . O 5 HOH B 12 512 567 HOH HOH . O 5 HOH B 13 513 609 HOH HOH . O 5 HOH B 14 514 621 HOH HOH . O 5 HOH B 15 515 617 HOH HOH . O 5 HOH B 16 516 620 HOH HOH . O 5 HOH B 17 517 604 HOH HOH . O 5 HOH B 18 518 625 HOH HOH . O 5 HOH B 19 519 635 HOH HOH . O 5 HOH B 20 520 638 HOH HOH . O 5 HOH B 21 521 541 HOH HOH . O 5 HOH B 22 522 637 HOH HOH . O 5 HOH B 23 523 650 HOH HOH . O 5 HOH B 24 524 607 HOH HOH . O 5 HOH B 25 525 628 HOH HOH . O 5 HOH B 26 526 623 HOH HOH . O 5 HOH B 27 527 619 HOH HOH . O 5 HOH B 28 528 636 HOH HOH . O 5 HOH B 29 529 629 HOH HOH . O 5 HOH B 30 530 622 HOH HOH . O 5 HOH B 31 531 641 HOH HOH . O 5 HOH B 32 532 624 HOH HOH . O 5 HOH B 33 533 634 HOH HOH . O 5 HOH B 34 534 611 HOH HOH . O 5 HOH B 35 535 660 HOH HOH . O 5 HOH B 36 536 654 HOH HOH . O 5 HOH B 37 537 608 HOH HOH . O 5 HOH B 38 538 640 HOH HOH . O 5 HOH B 39 539 631 HOH HOH . O 5 HOH B 40 540 642 HOH HOH . O 5 HOH B 41 541 633 HOH HOH . O 5 HOH B 42 542 645 HOH HOH . O 5 HOH B 43 543 646 HOH HOH . O 5 HOH B 44 544 665 HOH HOH . O 5 HOH B 45 545 612 HOH HOH . O 5 HOH B 46 546 639 HOH HOH . O 5 HOH B 47 547 653 HOH HOH . O 5 HOH B 48 548 666 HOH HOH . O 5 HOH B 49 549 644 HOH HOH . O 5 HOH B 50 550 657 HOH HOH . O 5 HOH B 51 551 661 HOH HOH . O 5 HOH B 52 552 655 HOH HOH . O 5 HOH B 53 553 674 HOH HOH . O 5 HOH B 54 554 552 HOH HOH . O 5 HOH B 55 555 627 HOH HOH . O 5 HOH B 56 556 659 HOH HOH . O 5 HOH B 57 557 656 HOH HOH . O 5 HOH B 58 558 618 HOH HOH . O 5 HOH B 59 559 643 HOH HOH . O 5 HOH B 60 560 658 HOH HOH . O 5 HOH B 61 561 630 HOH HOH . O 5 HOH B 62 562 620 HOH HOH . O 5 HOH B 63 563 673 HOH HOH . O 5 HOH B 64 564 667 HOH HOH . O 5 HOH B 65 565 652 HOH HOH . O 5 HOH B 66 566 671 HOH HOH . O 5 HOH B 67 567 577 HOH HOH . O 5 HOH B 68 568 663 HOH HOH . O 5 HOH B 69 569 668 HOH HOH . O 5 HOH B 70 570 649 HOH HOH . O 5 HOH B 71 571 664 HOH HOH . O 5 HOH B 72 572 675 HOH HOH . O 5 HOH B 73 573 676 HOH HOH . O 5 HOH B 74 574 669 HOH HOH . O 5 HOH B 75 575 685 HOH HOH . O 5 HOH B 76 576 680 HOH HOH . O 5 HOH B 77 577 670 HOH HOH . O 5 HOH B 78 578 682 HOH HOH . O 5 HOH B 79 579 677 HOH HOH . O 5 HOH B 80 580 688 HOH HOH . O 5 HOH B 81 581 681 HOH HOH . O 5 HOH B 82 582 678 HOH HOH . O 5 HOH B 83 583 683 HOH HOH . O 5 HOH B 84 584 684 HOH HOH . O 5 HOH B 85 585 637 HOH HOH . O 5 HOH B 86 586 686 HOH HOH . O 5 HOH B 87 587 691 HOH HOH . O 5 HOH B 88 588 692 HOH HOH . O 5 HOH B 89 589 693 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . I 2 0.097 -12.139 17.679 1 61.22 ? S DMS 407 A 1 HETATM 2 O O DMS . . . I 2 0.199 -13.377 16.846 1 49.79 ? O DMS 407 A 1 HETATM 3 C C1 DMS . . . I 2 1.731 -11.358 17.769 1 71.39 ? C1 DMS 407 A 1 HETATM 4 C C2 DMS . . . I 2 -0.094 -12.581 19.428 1 63.36 ? C2 DMS 407 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #