data_7LFX # _model_server_result.job_id 3cIfK-EtrnINrWNqDndUkw _model_server_result.datetime_utc '2024-11-22 08:19:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lfx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":701}' # _entry.id 7LFX # _exptl.entry_id 7LFX _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 345.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CYCLIC GUANOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 233 A ILE 363 1_555 F CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc2 F CA CA . A CA 702 1_555 B O ILE 233 B ILE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.03 ? metalc ? metalc3 F CA CA . A CA 702 1_555 C O ILE 233 C ILE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.018 ? metalc ? metalc4 F CA CA . A CA 702 1_555 D O ILE 233 D ILE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.012 ? # _chem_comp.formula 'C10 H12 N5 O7 P' _chem_comp.formula_weight 345.205 _chem_comp.id PCG _chem_comp.mon_nstd_flag . _chem_comp.name 'CYCLIC GUANOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A PCG sing 235 n n PA O2A PCG doub 236 n n PA O5' PCG sing 237 n n PA O3' PCG sing 238 n n O1A HO1A PCG sing 239 n n O5' C5' PCG sing 240 n n C5' C4' PCG sing 241 n n C5' "H5'1" PCG sing 242 n n C5' "H5'2" PCG sing 243 n n C4' O4' PCG sing 244 n n C4' C3' PCG sing 245 n n C4' H4' PCG sing 246 n n O4' C1' PCG sing 247 n n C3' O3' PCG sing 248 n n C3' C2' PCG sing 249 n n C3' H3' PCG sing 250 n n C2' O2' PCG sing 251 n n C2' C1' PCG sing 252 n n C2' H2' PCG sing 253 n n O2' HO2' PCG sing 254 n n C1' N9 PCG sing 255 n n C1' H1' PCG sing 256 n n N9 C8 PCG sing 257 n y N9 C4 PCG sing 258 n y C8 N7 PCG doub 259 n y C8 H8 PCG sing 260 n n N7 C5 PCG sing 261 n y C5 C6 PCG sing 262 n n C5 C4 PCG doub 263 n y C6 O6 PCG doub 264 n n C6 N1 PCG sing 265 n n N1 C2 PCG sing 266 n n N1 HN1 PCG sing 267 n n C2 N2 PCG sing 268 n n C2 N3 PCG doub 269 n n N2 HN21 PCG sing 270 n n N2 HN22 PCG sing 271 n n N3 C4 PCG sing 272 n n # _atom_sites.entry_id 7LFX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PCG A 1 701 701 PCG PCG . F 3 CA A 1 702 1 CA CA . G 3 CA A 1 703 2 CA CA . H 2 PCG B 1 701 701 PCG PCG . I 2 PCG C 1 701 701 PCG PCG . J 2 PCG D 1 701 701 PCG PCG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA PCG . . . E 2 94.576 131.903 155.144 1 87.25 ? PA PCG 701 A 1 HETATM 2 O O1A PCG . . . E 2 93.727 131.533 156.296 1 87.25 ? O1A PCG 701 A 1 HETATM 3 O O2A PCG . . . E 2 95.938 131.322 155.054 1 87.25 -1 O2A PCG 701 A 1 HETATM 4 O O5' PCG . . . E 2 93.785 131.49 153.775 1 87.25 ? O5' PCG 701 A 1 HETATM 5 C C5' PCG . . . E 2 92.614 132.252 153.389 1 87.25 ? C5' PCG 701 A 1 HETATM 6 C C4' PCG . . . E 2 92.982 133.741 153.367 1 87.25 ? C4' PCG 701 A 1 HETATM 7 O O4' PCG . . . E 2 91.93 134.674 153.082 1 87.25 ? O4' PCG 701 A 1 HETATM 8 C C3' PCG . . . E 2 93.425 134.188 154.722 1 87.25 ? C3' PCG 701 A 1 HETATM 9 O O3' PCG . . . E 2 94.656 133.528 155.005 1 87.25 ? O3' PCG 701 A 1 HETATM 10 C C2' PCG . . . E 2 93.522 135.685 154.567 1 87.25 ? C2' PCG 701 A 1 HETATM 11 O O2' PCG . . . E 2 94.819 136.043 154.103 1 87.25 ? O2' PCG 701 A 1 HETATM 12 C C1' PCG . . . E 2 92.531 135.982 153.414 1 87.25 ? C1' PCG 701 A 1 HETATM 13 N N9 PCG . . . E 2 91.446 136.936 153.772 1 87.25 ? N9 PCG 701 A 1 HETATM 14 C C8 PCG . . . E 2 91.258 138.148 153.22 1 87.25 ? C8 PCG 701 A 1 HETATM 15 N N7 PCG . . . E 2 90.185 138.716 153.78 1 87.25 ? N7 PCG 701 A 1 HETATM 16 C C5 PCG . . . E 2 89.693 137.872 154.678 1 87.25 ? C5 PCG 701 A 1 HETATM 17 C C6 PCG . . . E 2 88.604 137.923 155.544 1 87.25 ? C6 PCG 701 A 1 HETATM 18 O O6 PCG . . . E 2 87.872 138.924 155.576 1 87.25 ? O6 PCG 701 A 1 HETATM 19 N N1 PCG . . . E 2 88.349 136.831 156.39 1 87.25 ? N1 PCG 701 A 1 HETATM 20 C C2 PCG . . . E 2 89.188 135.701 156.349 1 87.25 ? C2 PCG 701 A 1 HETATM 21 N N2 PCG . . . E 2 88.953 134.663 157.147 1 87.25 ? N2 PCG 701 A 1 HETATM 22 N N3 PCG . . . E 2 90.233 135.683 155.494 1 87.25 ? N3 PCG 701 A 1 HETATM 23 C C4 PCG . . . E 2 90.495 136.732 154.672 1 87.25 ? C4 PCG 701 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #