data_7LFY
#
_model_server_result.job_id            pKJo9qZRZP7P4aalx1Dpdg 
_model_server_result.datetime_utc      '2024-11-25 05:31:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lfy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":701}' 
#
_entry.id    7LFY 
#
_exptl.entry_id    7LFY 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              345.205 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CYCLIC GUANOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 235 A GLU 365 1_555 H NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc2 F NA NA . A NA 702 1_555 L O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? 
metalc ? metalc3 F NA NA . A NA 702 1_555 M O HOH . B HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.075 ? 
metalc ? metalc4 F NA NA . A NA 702 1_555 N O HOH . C HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.085 ? 
metalc ? metalc5 F NA NA . A NA 702 1_555 O O HOH . D HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? 
metalc ? metalc6 H NA NA . A NA 704 1_555 B OE2 GLU 235 B GLU 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc7 H NA NA . A NA 704 1_555 C OE2 GLU 235 C GLU 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc8 H NA NA . A NA 704 1_555 D OE2 GLU 235 D GLU 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
#
_chem_comp.formula           'C10 H12 N5 O7 P' 
_chem_comp.formula_weight    345.205 
_chem_comp.id                PCG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CYCLIC GUANOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A PCG sing 237 n n 
PA O2A PCG doub 238 n n 
PA O5' PCG sing 239 n n 
PA O3' PCG sing 240 n n 
O1A HO1A PCG sing 241 n n 
O5' C5' PCG sing 242 n n 
C5' C4' PCG sing 243 n n 
C5' "H5'1" PCG sing 244 n n 
C5' "H5'2" PCG sing 245 n n 
C4' O4' PCG sing 246 n n 
C4' C3' PCG sing 247 n n 
C4' H4' PCG sing 248 n n 
O4' C1' PCG sing 249 n n 
C3' O3' PCG sing 250 n n 
C3' C2' PCG sing 251 n n 
C3' H3' PCG sing 252 n n 
C2' O2' PCG sing 253 n n 
C2' C1' PCG sing 254 n n 
C2' H2' PCG sing 255 n n 
O2' HO2' PCG sing 256 n n 
C1' N9 PCG sing 257 n n 
C1' H1' PCG sing 258 n n 
N9 C8 PCG sing 259 n y 
N9 C4 PCG sing 260 n y 
C8 N7 PCG doub 261 n y 
C8 H8 PCG sing 262 n n 
N7 C5 PCG sing 263 n y 
C5 C6 PCG sing 264 n n 
C5 C4 PCG doub 265 n y 
C6 O6 PCG doub 266 n n 
C6 N1 PCG sing 267 n n 
N1 C2 PCG sing 268 n n 
N1 HN1 PCG sing 269 n n 
C2 N2 PCG sing 270 n n 
C2 N3 PCG doub 271 n n 
N2 HN21 PCG sing 272 n n 
N2 HN22 PCG sing 273 n n 
N3 C4 PCG sing 274 n n 
#
_atom_sites.entry_id                     7LFY 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PCG A 1 701 701 PCG PCG . 
F 3 NA A 1 702 1 NA NA . 
G 3 NA A 1 703 2 NA NA . 
H 3 NA A 1 704 3 NA NA . 
I 2 PCG B 1 701 701 PCG PCG . 
J 2 PCG C 1 701 701 PCG PCG . 
K 2 PCG D 1 701 701 PCG PCG . 
L 4 HOH A 1 801 2 HOH HOH . 
M 4 HOH B 1 801 1 HOH HOH . 
N 4 HOH C 1 801 4 HOH HOH . 
O 4 HOH D 1 801 3 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA PCG . . . K 2 134.663 141.234 164.063 1 87.25 ? PA PCG 701 D 1 
HETATM 2 O O1A PCG . . . K 2 134.267 142.07 165.215 1 87.25 ? O1A PCG 701 D 1 
HETATM 3 O O2A PCG . . . K 2 134.127 139.853 163.973 1 87.25 -1 O2A PCG 701 D 1 
HETATM 4 O O5' PCG . . . K 2 134.226 142.011 162.694 1 87.25 ? O5' PCG 701 D 1 
HETATM 5 C C5' PCG . . . K 2 134.949 143.206 162.308 1 87.25 ? C5' PCG 701 D 1 
HETATM 6 C C4' PCG . . . K 2 136.449 142.886 162.285 1 87.25 ? C4' PCG 701 D 1 
HETATM 7 O O4' PCG . . . K 2 137.348 143.967 162 1 87.25 ? O4' PCG 701 D 1 
HETATM 8 C C3' PCG . . . K 2 136.911 142.457 163.641 1 87.25 ? C3' PCG 701 D 1 
HETATM 9 O O3' PCG . . . K 2 136.291 141.206 163.924 1 87.25 ? O3' PCG 701 D 1 
HETATM 10 C C2' PCG . . . K 2 138.41 142.41 163.486 1 87.25 ? C2' PCG 701 D 1 
HETATM 11 O O2' PCG . . . K 2 138.809 141.124 163.02 1 87.25 ? O2' PCG 701 D 1 
HETATM 12 C C1' PCG . . . K 2 138.674 143.409 162.332 1 87.25 ? C1' PCG 701 D 1 
HETATM 13 N N9 PCG . . . K 2 139.594 144.524 162.691 1 87.25 ? N9 PCG 701 D 1 
HETATM 14 C C8 PCG . . . K 2 140.799 144.751 162.139 1 87.25 ? C8 PCG 701 D 1 
HETATM 15 N N7 PCG . . . K 2 141.331 145.842 162.699 1 87.25 ? N7 PCG 701 D 1 
HETATM 16 C C5 PCG . . . K 2 140.472 146.307 163.597 1 87.25 ? C5 PCG 701 D 1 
HETATM 17 C C6 PCG . . . K 2 140.488 147.396 164.462 1 87.25 ? C6 PCG 701 D 1 
HETATM 18 O O6 PCG . . . K 2 141.465 148.16 164.494 1 87.25 ? O6 PCG 701 D 1 
HETATM 19 N N1 PCG . . . K 2 139.389 147.616 165.309 1 87.25 ? N1 PCG 701 D 1 
HETATM 20 C C2 PCG . . . K 2 138.287 146.741 165.269 1 87.25 ? C2 PCG 701 D 1 
HETATM 21 N N2 PCG . . . K 2 137.241 146.942 166.067 1 87.25 ? N2 PCG 701 D 1 
HETATM 22 N N3 PCG . . . K 2 138.301 145.696 164.414 1 87.25 ? N3 PCG 701 D 1 
HETATM 23 C C4 PCG . . . K 2 139.357 145.469 163.59 1 87.25 ? C4 PCG 701 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#