data_7LGD # _model_server_result.job_id H7cbxl2SpRWMjcOnpB2xeg _model_server_result.datetime_utc '2024-10-19 10:16:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lgd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 7LGD # _exptl.entry_id 7LGD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LGD _cell.length_a 64.454 _cell.length_b 107.176 _cell.length_c 174.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LGD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,I,Q,R,V 1 1 C,D,E,J,K,L,M,N,O,P,S,T,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 L N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 C SG CYS 101 C CYS 101 1_555 C SG CYS 164 C CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? disulf ? disulf5 C SG CYS 203 C CYS 203 1_555 C SG CYS 259 C CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf6 D SG CYS 26 D CYS 25 1_555 D SG CYS 81 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 7LGD _atom_sites.fract_transf_matrix[1][1] 0.015515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CL A 1 301 2 CL CL . H 4 CL A 1 302 3 CL CL . I 4 CL B 1 101 4 CL CL . J 5 SO4 C 1 301 1 SO4 SO4 . K 5 SO4 C 1 302 2 SO4 SO4 . L 5 SO4 C 1 303 3 SO4 SO4 . M 4 CL C 1 304 1 CL CL . N 6 NA C 1 305 1 NA NA . O 5 SO4 D 1 101 4 SO4 SO4 . P 4 CL D 1 102 5 CL CL . Q 7 HOH A 1 401 12 HOH HOH . Q 7 HOH A 2 402 17 HOH HOH . Q 7 HOH A 3 403 6 HOH HOH . Q 7 HOH A 4 404 13 HOH HOH . Q 7 HOH A 5 405 37 HOH HOH . Q 7 HOH A 6 406 1 HOH HOH . Q 7 HOH A 7 407 29 HOH HOH . Q 7 HOH A 8 408 31 HOH HOH . Q 7 HOH A 9 409 34 HOH HOH . Q 7 HOH A 10 410 5 HOH HOH . Q 7 HOH A 11 411 2 HOH HOH . Q 7 HOH A 12 412 24 HOH HOH . Q 7 HOH A 13 413 40 HOH HOH . Q 7 HOH A 14 414 42 HOH HOH . R 7 HOH B 1 201 44 HOH HOH . R 7 HOH B 2 202 46 HOH HOH . S 7 HOH C 1 401 39 HOH HOH . S 7 HOH C 2 402 21 HOH HOH . S 7 HOH C 3 403 32 HOH HOH . S 7 HOH C 4 404 10 HOH HOH . S 7 HOH C 5 405 11 HOH HOH . S 7 HOH C 6 406 49 HOH HOH . S 7 HOH C 7 407 16 HOH HOH . S 7 HOH C 8 408 30 HOH HOH . S 7 HOH C 9 409 23 HOH HOH . S 7 HOH C 10 410 25 HOH HOH . S 7 HOH C 11 411 48 HOH HOH . S 7 HOH C 12 412 28 HOH HOH . S 7 HOH C 13 413 36 HOH HOH . S 7 HOH C 14 414 47 HOH HOH . S 7 HOH C 15 415 8 HOH HOH . S 7 HOH C 16 416 26 HOH HOH . S 7 HOH C 17 417 43 HOH HOH . T 7 HOH D 1 201 18 HOH HOH . T 7 HOH D 2 202 9 HOH HOH . T 7 HOH D 3 203 38 HOH HOH . T 7 HOH D 4 204 4 HOH HOH . U 7 HOH E 1 101 27 HOH HOH . U 7 HOH E 2 102 15 HOH HOH . V 7 HOH F 1 101 33 HOH HOH . V 7 HOH F 2 102 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 5 4.322 -14.155 11.928 1 78.94 ? S SO4 301 C 1 HETATM 2 O O1 SO4 . . . J 5 4.763 -13.947 10.544 1 68.86 ? O1 SO4 301 C 1 HETATM 3 O O2 SO4 . . . J 5 4.17 -15.595 12.151 1 73.51 ? O2 SO4 301 C 1 HETATM 4 O O3 SO4 . . . J 5 3.042 -13.484 12.184 1 68.44 ? O3 SO4 301 C 1 HETATM 5 O O4 SO4 . . . J 5 5.324 -13.606 12.848 1 68.09 ? O4 SO4 301 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #