data_7LGQ # _model_server_result.job_id SExn82j5S6ZHCEBLmO7A-g _model_server_result.datetime_utc '2025-04-01 13:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lgq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":903}' # _entry.id 7LGQ # _exptl.entry_id 7LGQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 O N N ? 4 P N N ? 4 S N N ? 4 T N N ? 4 W N N ? 4 X N N ? 4 AA N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C 7ID 5 E 7ID 5 1_555 E N 7ID 6 E 7ID 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.518 ? covale ? covale2 E C 7ID 6 E 7ID 6 1_555 E N 7ID 7 E 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.479 ? covale ? covale3 E C 7ID 7 E 7ID 7 1_555 E N 7ID 8 E 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale4 E C 7ID 8 E 7ID 8 1_555 E N ASN 9 E ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale5 F C 7ID 5 F 7ID 5 1_555 F N 7ID 6 F 7ID 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.518 ? covale ? covale6 F C 7ID 6 F 7ID 6 1_555 F N 7ID 7 F 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.479 ? covale ? covale7 F C 7ID 7 F 7ID 7 1_555 F N 7ID 8 F 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale8 F C 7ID 8 F 7ID 8 1_555 F N ASN 9 F ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale9 G C 7ID 5 G 7ID 5 1_555 G N 7ID 6 G 7ID 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.518 ? covale ? covale10 G C 7ID 6 G 7ID 6 1_555 G N 7ID 7 G 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.479 ? covale ? covale11 G C 7ID 7 G 7ID 7 1_555 G N 7ID 8 G 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale12 G C 7ID 8 G 7ID 8 1_555 G N ASN 9 G ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale13 H C 7ID 5 H 7ID 5 1_555 H N 7ID 6 H 7ID 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.518 ? covale ? covale14 H C 7ID 6 H 7ID 6 1_555 H N 7ID 7 H 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.478 ? covale ? covale15 H C 7ID 7 H 7ID 7 1_555 H N 7ID 8 H 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale16 H C 7ID 8 H 7ID 8 1_555 H N ASN 9 H ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale17 I C 7ID 6 I 7ID 6 1_555 I N 7ID 7 I 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale18 I C 7ID 7 I 7ID 7 1_555 I N 7ID 8 I 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale19 I C 7ID 8 I 7ID 8 1_555 I N ASN 9 I ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? covale ? covale20 J C 7ID 6 J 7ID 6 1_555 J N 7ID 7 J 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale21 J C 7ID 7 J 7ID 7 1_555 J N 7ID 8 J 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale22 J C 7ID 8 J 7ID 8 1_555 J N ASN 9 J ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? covale ? covale23 K C 7ID 6 K 7ID 6 1_555 K N 7ID 7 K 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale24 K C 7ID 7 K 7ID 7 1_555 K N 7ID 8 K 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale25 K C 7ID 8 K 7ID 8 1_555 K N ASN 9 K ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? covale ? covale26 L C 7ID 6 L 7ID 6 1_555 L N 7ID 7 L 7ID 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale27 L C 7ID 7 L 7ID 7 1_555 L N 7ID 8 L 7ID 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale28 L C 7ID 8 L 7ID 8 1_555 L N ASN 9 L ASN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? metalc ? metalc1 A OG1 THR 500 A THR 500 1_555 O MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc2 A OE1 GLU 558 A GLU 558 1_555 O MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc3 A OE2 GLU 558 A GLU 558 1_555 O MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc4 M O2G ATP . A ATP 901 1_555 P MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc5 B OG1 THR 500 B THR 500 1_555 S MG MG . B MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc6 B OE1 GLU 558 B GLU 558 1_555 S MG MG . B MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc7 B OE2 GLU 558 B GLU 558 1_555 S MG MG . B MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc8 Q O2G ATP . B ATP 901 1_555 T MG MG . B MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc9 C OG1 THR 500 C THR 500 1_555 W MG MG . C MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc10 C OE1 GLU 558 C GLU 558 1_555 W MG MG . C MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc11 C OE2 GLU 558 C GLU 558 1_555 W MG MG . C MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc12 U O2G ATP . C ATP 901 1_555 X MG MG . C MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc13 D OG1 THR 500 D THR 500 1_555 AA MG MG . D MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc14 D OE1 GLU 558 D GLU 558 1_555 AA MG MG . D MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc15 D OE2 GLU 558 D GLU 558 1_555 AA MG MG . D MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc16 Y O2G ATP . D ATP 901 1_555 BA MG MG . D MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7LGQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 ATP A 1 901 876 ATP ATP . N 3 ATP A 1 902 877 ATP ATP . O 4 MG A 1 903 878 MG MG . P 4 MG A 1 904 879 MG MG . Q 3 ATP B 1 901 876 ATP ATP . R 3 ATP B 1 902 877 ATP ATP . S 4 MG B 1 903 878 MG MG . T 4 MG B 1 904 879 MG MG . U 3 ATP C 1 901 876 ATP ATP . V 3 ATP C 1 902 877 ATP ATP . W 4 MG C 1 903 878 MG MG . X 4 MG C 1 904 879 MG MG . Y 3 ATP D 1 901 876 ATP ATP . Z 3 ATP D 1 902 877 ATP ATP . AA 4 MG D 1 903 878 MG MG . BA 4 MG D 1 904 879 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id S _atom_site.label_entity_id 4 _atom_site.Cartn_x 157.205 _atom_site.Cartn_y 201.427 _atom_site.Cartn_z 197.307 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 903 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 53 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #