data_7LGU
#
_model_server_result.job_id            vJpf-x1IN9aYegApNCDJpw 
_model_server_result.datetime_utc      '2024-11-05 04:09:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lgu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"XC","auth_seq_id":845}' 
#
_entry.id    7LGU 
#
_exptl.entry_id    7LGU 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              114.229 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-OCTANE 
_entity.pdbx_number_of_molecules    50 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7LGU 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7LGU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD,HD,ID,JD 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 K N N 
? 4 L N N 
? 4 T N N 
? 4 V N N 
? 4 AA N N 
? 4 DA N N 
? 4 NA N N 
? 4 PA N N 
? 4 TA N N 
? 4 UA N N 
? 4 VA N N 
? 4 WA N N 
? 4 XA N N 
? 4 YA N N 
? 4 ZA N N 
? 4 AB N N 
? 4 BB N N 
? 4 CB N N 
? 4 DB N N 
? 4 EB N N 
? 4 HB N N 
? 4 IB N N 
? 4 JB N N 
? 4 KB N N 
? 4 LB N N 
? 4 NB N N 
? 4 OB N N 
? 4 WB N N 
? 4 YB N N 
? 4 DC N N 
? 4 GC N N 
? 4 QC N N 
? 4 SC N N 
? 4 WC N N 
? 4 XC N N 
? 4 YC N N 
? 4 ZC N N 
? 4 AD N N 
? 4 BD N N 
? 4 CD N N 
? 4 DD N N 
? 4 ED N N 
? 4 FD N N 
? 4 GD N N 
? 4 HD N N 
#
_chem_comp.formula           'C8 H18' 
_chem_comp.formula_weight    114.229 
_chem_comp.id                OCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCT sing 466 n n 
C1 H11 OCT sing 467 n n 
C1 H12 OCT sing 468 n n 
C1 H13 OCT sing 469 n n 
C2 C3 OCT sing 470 n n 
C2 H21 OCT sing 471 n n 
C2 H22 OCT sing 472 n n 
C3 C4 OCT sing 473 n n 
C3 H31 OCT sing 474 n n 
C3 H32 OCT sing 475 n n 
C4 C5 OCT sing 476 n n 
C4 H41 OCT sing 477 n n 
C4 H42 OCT sing 478 n n 
C5 C6 OCT sing 479 n n 
C5 H51 OCT sing 480 n n 
C5 H52 OCT sing 481 n n 
C6 C7 OCT sing 482 n n 
C6 H61 OCT sing 483 n n 
C6 H62 OCT sing 484 n n 
C7 C8 OCT sing 485 n n 
C7 H71 OCT sing 486 n n 
C7 H72 OCT sing 487 n n 
C8 H81 OCT sing 488 n n 
C8 H82 OCT sing 489 n n 
C8 H83 OCT sing 490 n n 
#
_atom_sites.entry_id                     7LGU 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 801 801 CL CL . 
D 3 CLR A 1 802 901 CLR CLR . 
E 4 OCT A 1 803 902 OCT OCT . 
F 4 OCT A 1 804 903 OCT OCT . 
G 4 OCT A 1 805 904 OCT OCT . 
H 4 OCT A 1 806 905 OCT OCT . 
I 4 OCT A 1 807 906 OCT OCT . 
J 5 D10 A 1 808 907 D10 D10 . 
K 4 OCT A 1 809 908 OCT D10 . 
L 4 OCT A 1 810 909 OCT OCT . 
M 6 D12 A 1 811 911 D12 D12 . 
N 6 D12 A 1 812 912 D12 D12 . 
O 5 D10 A 1 813 913 D10 D10 . 
P 5 D10 A 1 814 914 D10 D10 . 
Q 5 D10 A 1 815 915 D10 D10 . 
R 6 D12 A 1 816 916 D12 D12 . 
S 5 D10 A 1 817 917 D10 D10 . 
T 4 OCT A 1 818 919 OCT OCT . 
U 5 D10 A 1 819 920 D10 D10 . 
V 4 OCT A 1 820 921 OCT OCT . 
W 5 D10 A 1 821 922 D10 D10 . 
X 5 D10 A 1 822 923 D10 D10 . 
Y 5 D10 A 1 823 924 D10 D10 . 
Z 6 D12 A 1 824 925 D12 D12 . 
AA 4 OCT A 1 825 926 OCT OCT . 
BA 7 HEX A 1 826 927 HEX HEX . 
CA 8 HP6 A 1 827 928 HP6 OCT . 
DA 4 OCT A 1 828 929 OCT OCT . 
EA 5 D10 A 1 829 930 D10 D10 . 
FA 9 C14 A 1 830 931 C14 C14 . 
GA 9 C14 A 1 831 932 C14 C14 . 
HA 5 D10 A 1 832 933 D10 D10 . 
IA 5 D10 A 1 833 934 D10 D10 . 
JA 5 D10 A 1 834 935 D10 D10 . 
KA 5 D10 A 1 835 936 D10 D10 . 
LA 5 D10 A 1 836 937 D10 D10 . 
MA 5 D10 A 1 837 938 D10 D10 . 
NA 4 OCT A 1 838 939 OCT OCT . 
OA 5 D10 A 1 839 940 D10 D10 . 
PA 4 OCT A 1 840 941 OCT OCT . 
QA 8 HP6 A 1 841 942 HP6 OCT . 
RA 6 D12 A 1 842 943 D12 D12 . 
SA 5 D10 A 1 843 944 D10 D10 . 
TA 4 OCT A 1 844 945 OCT OCT . 
UA 4 OCT A 1 845 946 OCT OCT . 
VA 4 OCT A 1 846 947 OCT OCT . 
WA 4 OCT A 1 847 948 OCT OCT . 
XA 4 OCT A 1 848 949 OCT OCT . 
YA 4 OCT A 1 849 950 OCT OCT . 
ZA 4 OCT A 1 850 951 OCT OCT . 
AB 4 OCT A 1 851 952 OCT OCT . 
BB 4 OCT A 1 852 953 OCT OCT . 
CB 4 OCT A 1 853 954 OCT OCT . 
DB 4 OCT A 1 854 955 OCT OCT . 
EB 4 OCT A 1 855 956 OCT OCT . 
FB 2 CL B 1 801 801 CL CL . 
GB 3 CLR B 1 802 901 CLR CLR . 
HB 4 OCT B 1 803 902 OCT OCT . 
IB 4 OCT B 1 804 903 OCT OCT . 
JB 4 OCT B 1 805 904 OCT OCT . 
KB 4 OCT B 1 806 905 OCT OCT . 
LB 4 OCT B 1 807 906 OCT OCT . 
MB 5 D10 B 1 808 907 D10 D10 . 
NB 4 OCT B 1 809 908 OCT D10 . 
OB 4 OCT B 1 810 909 OCT OCT . 
PB 6 D12 B 1 811 911 D12 D12 . 
QB 6 D12 B 1 812 912 D12 D12 . 
RB 5 D10 B 1 813 913 D10 D10 . 
SB 5 D10 B 1 814 914 D10 D10 . 
TB 5 D10 B 1 815 915 D10 D10 . 
UB 6 D12 B 1 816 916 D12 D12 . 
VB 5 D10 B 1 817 917 D10 D10 . 
WB 4 OCT B 1 818 919 OCT OCT . 
XB 5 D10 B 1 819 920 D10 D10 . 
YB 4 OCT B 1 820 921 OCT OCT . 
ZB 5 D10 B 1 821 922 D10 D10 . 
AC 5 D10 B 1 822 923 D10 D10 . 
BC 5 D10 B 1 823 924 D10 D10 . 
CC 6 D12 B 1 824 925 D12 D12 . 
DC 4 OCT B 1 825 926 OCT OCT . 
EC 7 HEX B 1 826 927 HEX HEX . 
FC 8 HP6 B 1 827 928 HP6 OCT . 
GC 4 OCT B 1 828 929 OCT OCT . 
HC 5 D10 B 1 829 930 D10 D10 . 
IC 9 C14 B 1 830 931 C14 C14 . 
JC 9 C14 B 1 831 932 C14 C14 . 
KC 5 D10 B 1 832 933 D10 D10 . 
LC 5 D10 B 1 833 934 D10 D10 . 
MC 5 D10 B 1 834 935 D10 D10 . 
NC 5 D10 B 1 835 936 D10 D10 . 
OC 5 D10 B 1 836 937 D10 D10 . 
PC 5 D10 B 1 837 938 D10 D10 . 
QC 4 OCT B 1 838 939 OCT OCT . 
RC 5 D10 B 1 839 940 D10 D10 . 
SC 4 OCT B 1 840 941 OCT OCT . 
TC 8 HP6 B 1 841 942 HP6 OCT . 
UC 6 D12 B 1 842 943 D12 D12 . 
VC 5 D10 B 1 843 944 D10 D10 . 
WC 4 OCT B 1 844 945 OCT OCT . 
XC 4 OCT B 1 845 946 OCT OCT . 
YC 4 OCT B 1 846 947 OCT OCT . 
ZC 4 OCT B 1 847 948 OCT OCT . 
AD 4 OCT B 1 848 949 OCT OCT . 
BD 4 OCT B 1 849 950 OCT OCT . 
CD 4 OCT B 1 850 951 OCT OCT . 
DD 4 OCT B 1 851 952 OCT OCT . 
ED 4 OCT B 1 852 953 OCT OCT . 
FD 4 OCT B 1 853 954 OCT OCT . 
GD 4 OCT B 1 854 955 OCT OCT . 
HD 4 OCT B 1 855 956 OCT OCT . 
ID 10 HOH A 1 901 11 HOH HOH . 
ID 10 HOH A 2 902 73 HOH HOH . 
ID 10 HOH A 3 903 22 HOH HOH . 
ID 10 HOH A 4 904 68 HOH HOH . 
ID 10 HOH A 5 905 61 HOH HOH . 
ID 10 HOH A 6 906 41 HOH HOH . 
ID 10 HOH A 7 907 39 HOH HOH . 
ID 10 HOH A 8 908 18 HOH HOH . 
ID 10 HOH A 9 909 8 HOH HOH . 
ID 10 HOH A 10 910 74 HOH HOH . 
ID 10 HOH A 11 911 14 HOH HOH . 
ID 10 HOH A 12 912 20 HOH HOH . 
ID 10 HOH A 13 913 42 HOH HOH . 
ID 10 HOH A 14 914 37 HOH HOH . 
ID 10 HOH A 15 915 31 HOH HOH . 
ID 10 HOH A 16 916 49 HOH HOH . 
ID 10 HOH A 17 917 105 HOH HOH . 
ID 10 HOH A 18 918 60 HOH HOH . 
ID 10 HOH A 19 919 98 HOH HOH . 
ID 10 HOH A 20 920 84 HOH HOH . 
ID 10 HOH A 21 921 109 HOH HOH . 
ID 10 HOH A 22 922 53 HOH HOH . 
ID 10 HOH A 23 923 72 HOH HOH . 
ID 10 HOH A 24 924 103 HOH HOH . 
ID 10 HOH A 25 925 101 HOH HOH . 
ID 10 HOH A 26 926 63 HOH HOH . 
ID 10 HOH A 27 927 26 HOH HOH . 
ID 10 HOH A 28 928 10 HOH HOH . 
ID 10 HOH A 29 929 82 HOH HOH . 
ID 10 HOH A 30 930 81 HOH HOH . 
ID 10 HOH A 31 931 107 HOH HOH . 
ID 10 HOH A 32 932 56 HOH HOH . 
ID 10 HOH A 33 933 51 HOH HOH . 
ID 10 HOH A 34 934 110 HOH HOH . 
ID 10 HOH A 35 935 44 HOH HOH . 
ID 10 HOH A 36 936 55 HOH HOH . 
ID 10 HOH A 37 937 89 HOH HOH . 
ID 10 HOH A 38 938 67 HOH HOH . 
ID 10 HOH A 39 939 30 HOH HOH . 
ID 10 HOH A 40 940 90 HOH HOH . 
ID 10 HOH A 41 941 24 HOH HOH . 
ID 10 HOH A 42 942 27 HOH HOH . 
ID 10 HOH A 43 943 64 HOH HOH . 
ID 10 HOH A 44 944 35 HOH HOH . 
ID 10 HOH A 45 945 86 HOH HOH . 
ID 10 HOH A 46 946 76 HOH HOH . 
ID 10 HOH A 47 947 46 HOH HOH . 
ID 10 HOH A 48 948 16 HOH HOH . 
ID 10 HOH A 49 949 80 HOH HOH . 
ID 10 HOH A 50 950 99 HOH HOH . 
ID 10 HOH A 51 951 93 HOH HOH . 
ID 10 HOH A 52 952 94 HOH HOH . 
ID 10 HOH A 53 953 2 HOH HOH . 
ID 10 HOH A 54 954 5 HOH HOH . 
ID 10 HOH A 55 955 3 HOH HOH . 
JD 10 HOH B 1 901 12 HOH HOH . 
JD 10 HOH B 2 902 71 HOH HOH . 
JD 10 HOH B 3 903 21 HOH HOH . 
JD 10 HOH B 4 904 69 HOH HOH . 
JD 10 HOH B 5 905 59 HOH HOH . 
JD 10 HOH B 6 906 33 HOH HOH . 
JD 10 HOH B 7 907 40 HOH HOH . 
JD 10 HOH B 8 908 38 HOH HOH . 
JD 10 HOH B 9 909 17 HOH HOH . 
JD 10 HOH B 10 910 7 HOH HOH . 
JD 10 HOH B 11 911 75 HOH HOH . 
JD 10 HOH B 12 912 13 HOH HOH . 
JD 10 HOH B 13 913 19 HOH HOH . 
JD 10 HOH B 14 914 36 HOH HOH . 
JD 10 HOH B 15 915 43 HOH HOH . 
JD 10 HOH B 16 916 32 HOH HOH . 
JD 10 HOH B 17 917 48 HOH HOH . 
JD 10 HOH B 18 918 104 HOH HOH . 
JD 10 HOH B 19 919 58 HOH HOH . 
JD 10 HOH B 20 920 96 HOH HOH . 
JD 10 HOH B 21 921 108 HOH HOH . 
JD 10 HOH B 22 922 87 HOH HOH . 
JD 10 HOH B 23 923 52 HOH HOH . 
JD 10 HOH B 24 924 70 HOH HOH . 
JD 10 HOH B 25 925 102 HOH HOH . 
JD 10 HOH B 26 926 62 HOH HOH . 
JD 10 HOH B 27 927 97 HOH HOH . 
JD 10 HOH B 28 928 23 HOH HOH . 
JD 10 HOH B 29 929 83 HOH HOH . 
JD 10 HOH B 30 930 9 HOH HOH . 
JD 10 HOH B 31 931 79 HOH HOH . 
JD 10 HOH B 32 932 106 HOH HOH . 
JD 10 HOH B 33 933 57 HOH HOH . 
JD 10 HOH B 34 934 50 HOH HOH . 
JD 10 HOH B 35 935 111 HOH HOH . 
JD 10 HOH B 36 936 45 HOH HOH . 
JD 10 HOH B 37 937 54 HOH HOH . 
JD 10 HOH B 38 938 65 HOH HOH . 
JD 10 HOH B 39 939 88 HOH HOH . 
JD 10 HOH B 40 940 91 HOH HOH . 
JD 10 HOH B 41 941 29 HOH HOH . 
JD 10 HOH B 42 942 25 HOH HOH . 
JD 10 HOH B 43 943 28 HOH HOH . 
JD 10 HOH B 44 944 34 HOH HOH . 
JD 10 HOH B 45 945 85 HOH HOH . 
JD 10 HOH B 46 946 66 HOH HOH . 
JD 10 HOH B 47 947 77 HOH HOH . 
JD 10 HOH B 48 948 47 HOH HOH . 
JD 10 HOH B 49 949 15 HOH HOH . 
JD 10 HOH B 50 950 78 HOH HOH . 
JD 10 HOH B 51 951 100 HOH HOH . 
JD 10 HOH B 52 952 92 HOH HOH . 
JD 10 HOH B 53 953 95 HOH HOH . 
JD 10 HOH B 54 954 1 HOH HOH . 
JD 10 HOH B 55 955 6 HOH HOH . 
JD 10 HOH B 56 956 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCT . . . XC 4 45.98 101.86 81.463 1 72.59 ? C1 OCT 845 B 1 
HETATM 2 C C2 OCT . . . XC 4 44.982 102.996 81.256 1 72.59 ? C2 OCT 845 B 1 
HETATM 3 C C3 OCT . . . XC 4 45.425 104.22 82.053 1 72.59 ? C3 OCT 845 B 1 
HETATM 4 C C4 OCT . . . XC 4 45.404 103.894 83.544 1 72.59 ? C4 OCT 845 B 1 
HETATM 5 C C5 OCT . . . XC 4 45.617 105.173 84.349 1 72.59 ? C5 OCT 845 B 1 
HETATM 6 C C6 OCT . . . XC 4 45.383 104.887 85.831 1 72.59 ? C6 OCT 845 B 1 
HETATM 7 C C7 OCT . . . XC 4 43.973 104.335 86.029 1 72.59 ? C7 OCT 845 B 1 
HETATM 8 C C8 OCT . . . XC 4 43.771 103.971 87.498 1 72.59 ? C8 OCT 845 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#