data_7LH8 # _model_server_result.job_id jn-G-OPYW05k-1Bpg7Yfyw _model_server_result.datetime_utc '2024-11-24 19:11:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lh8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 7LH8 # _exptl.entry_id 7LH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LH8 _cell.length_a 44.88 _cell.length_b 49.43 _cell.length_c 53.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG1 _struct_conn.ptnr1_label_comp_id THR _struct_conn.ptnr1_label_seq_id 19 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id THR _struct_conn.ptnr1_auth_seq_id 60 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id NA _struct_conn.ptnr2_label_comp_id NA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NA _struct_conn.ptnr2_auth_seq_id 208 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 3.081 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7LH8 _atom_sites.fract_transf_matrix[1][1] 0.022282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XZG A 1 201 1 XZG LIG . C 3 EDO A 1 202 1 EDO EDO . D 3 EDO A 1 203 2 EDO EDO . E 3 EDO A 1 204 3 EDO EDO . F 3 EDO A 1 205 4 EDO EDO . G 3 EDO A 1 206 5 EDO EDO . H 3 EDO A 1 207 6 EDO EDO . I 4 NA A 1 208 1 NA NA . J 5 HOH A 1 301 19 HOH HOH . J 5 HOH A 2 302 63 HOH HOH . J 5 HOH A 3 303 49 HOH HOH . J 5 HOH A 4 304 45 HOH HOH . J 5 HOH A 5 305 73 HOH HOH . J 5 HOH A 6 306 61 HOH HOH . J 5 HOH A 7 307 71 HOH HOH . J 5 HOH A 8 308 52 HOH HOH . J 5 HOH A 9 309 13 HOH HOH . J 5 HOH A 10 310 3 HOH HOH . J 5 HOH A 11 311 6 HOH HOH . J 5 HOH A 12 312 92 HOH HOH . J 5 HOH A 13 313 79 HOH HOH . J 5 HOH A 14 314 20 HOH HOH . J 5 HOH A 15 315 8 HOH HOH . J 5 HOH A 16 316 25 HOH HOH . J 5 HOH A 17 317 26 HOH HOH . J 5 HOH A 18 318 12 HOH HOH . J 5 HOH A 19 319 5 HOH HOH . J 5 HOH A 20 320 7 HOH HOH . J 5 HOH A 21 321 39 HOH HOH . J 5 HOH A 22 322 54 HOH HOH . J 5 HOH A 23 323 16 HOH HOH . J 5 HOH A 24 324 9 HOH HOH . J 5 HOH A 25 325 69 HOH HOH . J 5 HOH A 26 326 33 HOH HOH . J 5 HOH A 27 327 80 HOH HOH . J 5 HOH A 28 328 4 HOH HOH . J 5 HOH A 29 329 32 HOH HOH . J 5 HOH A 30 330 18 HOH HOH . J 5 HOH A 31 331 81 HOH HOH . J 5 HOH A 32 332 78 HOH HOH . J 5 HOH A 33 333 17 HOH HOH . J 5 HOH A 34 334 30 HOH HOH . J 5 HOH A 35 335 90 HOH HOH . J 5 HOH A 36 336 53 HOH HOH . J 5 HOH A 37 337 14 HOH HOH . J 5 HOH A 38 338 77 HOH HOH . J 5 HOH A 39 339 43 HOH HOH . J 5 HOH A 40 340 94 HOH HOH . J 5 HOH A 41 341 34 HOH HOH . J 5 HOH A 42 342 28 HOH HOH . J 5 HOH A 43 343 85 HOH HOH . J 5 HOH A 44 344 29 HOH HOH . J 5 HOH A 45 345 27 HOH HOH . J 5 HOH A 46 346 93 HOH HOH . J 5 HOH A 47 347 22 HOH HOH . J 5 HOH A 48 348 24 HOH HOH . J 5 HOH A 49 349 57 HOH HOH . J 5 HOH A 50 350 72 HOH HOH . J 5 HOH A 51 351 68 HOH HOH . J 5 HOH A 52 352 40 HOH HOH . J 5 HOH A 53 353 38 HOH HOH . J 5 HOH A 54 354 11 HOH HOH . J 5 HOH A 55 355 31 HOH HOH . J 5 HOH A 56 356 23 HOH HOH . J 5 HOH A 57 357 91 HOH HOH . J 5 HOH A 58 358 86 HOH HOH . J 5 HOH A 59 359 2 HOH HOH . J 5 HOH A 60 360 58 HOH HOH . J 5 HOH A 61 361 21 HOH HOH . J 5 HOH A 62 362 76 HOH HOH . J 5 HOH A 63 363 62 HOH HOH . J 5 HOH A 64 364 89 HOH HOH . J 5 HOH A 65 365 88 HOH HOH . J 5 HOH A 66 366 83 HOH HOH . J 5 HOH A 67 367 66 HOH HOH . J 5 HOH A 68 368 87 HOH HOH . J 5 HOH A 69 369 84 HOH HOH . J 5 HOH A 70 370 48 HOH HOH . J 5 HOH A 71 371 44 HOH HOH . J 5 HOH A 72 372 82 HOH HOH . J 5 HOH A 73 373 60 HOH HOH . J 5 HOH A 74 374 36 HOH HOH . J 5 HOH A 75 375 74 HOH HOH . J 5 HOH A 76 376 56 HOH HOH . J 5 HOH A 77 377 46 HOH HOH . J 5 HOH A 78 378 64 HOH HOH . J 5 HOH A 79 379 65 HOH HOH . J 5 HOH A 80 380 41 HOH HOH . J 5 HOH A 81 381 50 HOH HOH . J 5 HOH A 82 382 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 -17.072 2.27 -6.85 1 44.73 ? C1 EDO 205 A 1 HETATM 2 O O1 EDO . . . F 3 -17.463 3.664 -6.943 1 34.73 ? O1 EDO 205 A 1 HETATM 3 C C2 EDO . . . F 3 -17.378 1.558 -8.167 1 48.48 ? C2 EDO 205 A 1 HETATM 4 O O2 EDO . . . F 3 -18.731 1.053 -8.2 1 50 ? O2 EDO 205 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #