data_7LIA # _model_server_result.job_id MD_A8CZQ_mrmSPnWSq2ZHA _model_server_result.datetime_utc '2024-11-22 13:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":925}' # _entry.id 7LIA # _exptl.entry_id 7LIA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LIA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id CA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 D 1 NAG A 2502 NAG 4 n D NAG 2 D 2 NAG A 2503 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 122 A CYS 200 1_555 A SG CYS 131 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 23 C CYS 43 1_555 C SG CYS 92 C CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A ND2 ASN 130 A ASN 208 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale2 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? metalc ? metalc1 A O GLY 16 A GLY 94 1_555 H NA NA . A NA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.154 ? metalc ? metalc2 A O ALA 18 A ALA 96 1_555 G NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc3 A O VAL 19 A VAL 97 1_555 H NA NA . A NA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc4 A OD1 ASP 20 A ASP 98 1_555 G NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc5 A O SER 258 A SER 336 1_555 G NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.139 ? metalc ? metalc6 A OD2 ASP 359 A ASP 437 1_555 H NA NA . A NA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7LIA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SRO A 1 901 901 SRO LIG . F 6 CL A 1 902 1001 CL CL . G 7 NA A 1 903 1101 NA NA . H 7 NA A 1 904 1201 NA NA . I 5 SRO A 1 905 1301 SRO LIG . J 8 D10 A 1 906 1404 D10 D10 . K 9 HP6 A 1 907 1405 HP6 HP6 . L 9 HP6 A 1 908 1406 HP6 HP6 . M 9 HP6 A 1 909 1407 HP6 HP6 . N 9 HP6 A 1 910 1408 HP6 HP6 . O 9 HP6 A 1 911 1409 HP6 HP6 . P 9 HP6 A 1 912 1410 HP6 HP6 . Q 9 HP6 A 1 913 1411 HP6 HP6 . R 9 HP6 A 1 914 1412 HP6 HP6 . S 9 HP6 A 1 915 1413 HP6 HP6 . T 9 HP6 A 1 916 1414 HP6 HP6 . U 10 LNK A 1 917 1501 LNK LNK . V 8 D10 A 1 918 1801 D10 D10 . W 8 D10 A 1 919 1901 D10 D10 . X 9 HP6 A 1 920 2001 HP6 HP6 . Y 9 HP6 A 1 921 2101 HP6 HP6 . Z 9 HP6 A 1 922 2201 HP6 HP6 . AA 8 D10 A 1 923 2301 D10 D10 . BA 8 D10 A 1 924 2401 D10 D10 . CA 11 CLR A 1 925 2501 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . CA 11 123.152 105.697 138.504 1 29.25 ? C1 CLR 925 A 1 HETATM 2 C C2 CLR . . . CA 11 121.74 105.938 139.021 1 29.25 ? C2 CLR 925 A 1 HETATM 3 C C3 CLR . . . CA 11 121.83 106.521 140.429 1 29.25 ? C3 CLR 925 A 1 HETATM 4 C C4 CLR . . . CA 11 122.497 107.891 140.323 1 29.25 ? C4 CLR 925 A 1 HETATM 5 C C5 CLR . . . CA 11 123.856 107.73 139.733 1 29.25 ? C5 CLR 925 A 1 HETATM 6 C C6 CLR . . . CA 11 124.873 108.308 140.346 1 29.25 ? C6 CLR 925 A 1 HETATM 7 C C7 CLR . . . CA 11 126.275 108.105 139.931 1 29.25 ? C7 CLR 925 A 1 HETATM 8 C C8 CLR . . . CA 11 126.329 107.861 138.429 1 29.25 ? C8 CLR 925 A 1 HETATM 9 C C9 CLR . . . CA 11 125.404 106.707 138.02 1 29.25 ? C9 CLR 925 A 1 HETATM 10 C C10 CLR . . . CA 11 123.934 107.022 138.406 1 29.25 ? C10 CLR 925 A 1 HETATM 11 C C11 CLR . . . CA 11 125.52 106.406 136.518 1 29.25 ? C11 CLR 925 A 1 HETATM 12 C C12 CLR . . . CA 11 126.961 106.155 136.072 1 29.25 ? C12 CLR 925 A 1 HETATM 13 C C13 CLR . . . CA 11 127.85 107.329 136.502 1 29.25 ? C13 CLR 925 A 1 HETATM 14 C C14 CLR . . . CA 11 127.74 107.468 138.036 1 29.25 ? C14 CLR 925 A 1 HETATM 15 C C15 CLR . . . CA 11 128.856 108.447 138.356 1 29.25 ? C15 CLR 925 A 1 HETATM 16 C C16 CLR . . . CA 11 130.008 107.915 137.501 1 29.25 ? C16 CLR 925 A 1 HETATM 17 C C17 CLR . . . CA 11 129.373 107.121 136.325 1 29.25 ? C17 CLR 925 A 1 HETATM 18 C C18 CLR . . . CA 11 127.415 108.644 135.823 1 29.25 ? C18 CLR 925 A 1 HETATM 19 C C19 CLR . . . CA 11 123.287 107.925 137.349 1 29.25 ? C19 CLR 925 A 1 HETATM 20 C C20 CLR . . . CA 11 129.906 107.589 134.959 1 29.25 ? C20 CLR 925 A 1 HETATM 21 C C21 CLR . . . CA 11 129.86 106.442 133.952 1 29.25 ? C21 CLR 925 A 1 HETATM 22 C C22 CLR . . . CA 11 131.331 108.124 135.101 1 29.25 ? C22 CLR 925 A 1 HETATM 23 C C23 CLR . . . CA 11 131.979 108.263 133.731 1 29.25 ? C23 CLR 925 A 1 HETATM 24 C C24 CLR . . . CA 11 133.492 108.259 133.881 1 29.25 ? C24 CLR 925 A 1 HETATM 25 C C25 CLR . . . CA 11 134.109 109.439 133.127 1 29.25 ? C25 CLR 925 A 1 HETATM 26 C C26 CLR . . . CA 11 133.991 109.206 131.632 1 29.25 ? C26 CLR 925 A 1 HETATM 27 C C27 CLR . . . CA 11 133.421 110.742 133.52 1 29.25 ? C27 CLR 925 A 1 HETATM 28 O O1 CLR . . . CA 11 120.53 106.647 140.911 1 29.25 ? O1 CLR 925 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #