data_7LIX
#
_model_server_result.job_id            W6TLCe4fxueDqI3yUN7UqA 
_model_server_result.datetime_utc      '2025-07-13 15:05:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lix 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":203}' 
#
_entry.id    7LIX 
#
_exptl.entry_id    7LIX 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              588.694 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHYCOERYTHROBILIN 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7LIX 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7LIX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B SG CYS 50 B CYS 50 1_555 G CAA PEB . B PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? 
covale ? covale2 B SG CYS 61 B CYS 61 1_555 G CAD PEB . B PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? 
covale ? covale3 B C GLY 71 B GLY 71 1_555 B N MEN 72 B MEN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale4 B C MEN 72 B MEN 72 1_555 B N CYS 73 B CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 B SG CYS 82 B CYS 82 1_555 E CAA PEB . B PEB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.787 ? 
covale ? covale6 B SG CYS 158 B CYS 158 1_555 F CAA PEB . B PEB 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? 
covale ? covale7 C SG CYS 50 C CYS 50 1_555 J CAA PEB . C PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
covale ? covale8 C SG CYS 61 C CYS 61 1_555 J CAD PEB . C PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? 
covale ? covale9 C C GLY 71 C GLY 71 1_555 C N MEN 72 C MEN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 C C MEN 72 C MEN 72 1_555 C N CYS 73 C CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale11 C SG CYS 82 C CYS 82 1_555 H CAA PEB . C PEB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? 
covale ? covale12 C SG CYS 158 C CYS 158 1_555 I CAA PEB . C PEB 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? 
covale ? covale13 D SG CYS 50 D CYS 50 1_555 M CAA PEB . D PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? 
covale ? covale14 D SG CYS 61 D CYS 61 1_555 M CAD PEB . D PEB 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? 
covale ? covale15 D C GLY 71 D GLY 71 1_555 D N MEN 72 D MEN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? 
covale ? covale16 D C MEN 72 D MEN 72 1_555 D N CYS 73 D CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? 
covale ? covale17 D SG CYS 82 D CYS 82 1_555 K CAA PEB . D PEB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.866 ? 
covale ? covale18 D SG CYS 158 D CYS 158 1_555 L CAA PEB . D PEB 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? 
#
_chem_comp.formula           'C33 H40 N4 O6' 
_chem_comp.formula_weight    588.694 
_chem_comp.id                PEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHYCOERYTHROBILIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHC C4C PEB sing 254 n n 
CHC C1D PEB sing 255 n n 
CHC HHC1 PEB sing 256 n n 
CHC HHC2 PEB sing 257 n n 
NC C1C PEB sing 258 n y 
NC C4C PEB sing 259 n y 
NC HNC PEB sing 260 n n 
C1C C2C PEB doub 261 n y 
C1C CHB PEB sing 262 n n 
C2C C3C PEB sing 263 n y 
C2C CAC PEB sing 264 n n 
C3C C4C PEB doub 265 n y 
C3C CMC PEB sing 266 n n 
CMC HMC1 PEB sing 267 n n 
CMC HMC2 PEB sing 268 n n 
CMC HMC3 PEB sing 269 n n 
CAC CBC PEB sing 270 n n 
CAC HAC1 PEB sing 271 n n 
CAC HAC2 PEB sing 272 n n 
CBC CGC PEB sing 273 n n 
CBC HBC1 PEB sing 274 n n 
CBC HBC2 PEB sing 275 n n 
CGC O1C PEB doub 276 n n 
CGC O2C PEB sing 277 n n 
O2C HOC2 PEB sing 278 n n 
ND C1D PEB sing 279 n n 
ND C4D PEB sing 280 n n 
ND HND PEB sing 281 n n 
C1D C2D PEB sing 282 n n 
C1D H1D1 PEB sing 283 n n 
C2D C3D PEB doub 284 n n 
C2D CMD PEB sing 285 n n 
C3D C4D PEB sing 286 n n 
C3D CAD PEB sing 287 n n 
C4D OD PEB doub 288 n n 
CMD HMD1 PEB sing 289 n n 
CMD HMD2 PEB sing 290 n n 
CMD HMD3 PEB sing 291 n n 
CAD CBD PEB doub 292 n n 
CAD HAD1 PEB sing 293 n n 
CBD HBD1 PEB sing 294 n n 
CBD HBD2 PEB sing 295 n n 
NA C1A PEB sing 296 n n 
NA C4A PEB sing 297 n n 
NA HNA PEB sing 298 n n 
C1A C2A PEB sing 299 n n 
C1A OA PEB doub 300 n n 
C2A C3A PEB sing 301 n n 
C2A CMA PEB sing 302 n n 
C2A H2A1 PEB sing 303 n n 
C3A C4A PEB sing 304 n n 
C3A CAA PEB sing 305 n n 
C3A H3A1 PEB sing 306 n n 
C4A CHA PEB doub 307 z n 
CMA HMA1 PEB sing 308 n n 
CMA HMA2 PEB sing 309 n n 
CMA HMA3 PEB sing 310 n n 
CBA CAA PEB sing 311 n n 
CBA HBA1 PEB sing 312 n n 
CBA HBA2 PEB sing 313 n n 
CBA HBA3 PEB sing 314 n n 
CHA C1B PEB sing 315 n n 
CHA HHA1 PEB sing 316 n n 
CAA HAA1 PEB sing 317 n n 
CAA HAA2 PEB sing 318 n n 
NB C1B PEB doub 319 n n 
NB C4B PEB sing 320 n n 
C1B C2B PEB sing 321 n n 
C2B C3B PEB doub 322 n n 
C2B CMB PEB sing 323 n n 
C3B C4B PEB sing 324 n n 
C3B CAB PEB sing 325 n n 
C4B CHB PEB doub 326 z n 
CHB HHB1 PEB sing 327 n n 
CMB HMB1 PEB sing 328 n n 
CMB HMB2 PEB sing 329 n n 
CMB HMB3 PEB sing 330 n n 
CAB CBB PEB sing 331 n n 
CAB HAB1 PEB sing 332 n n 
CAB HAB2 PEB sing 333 n n 
CBB CGB PEB sing 334 n n 
CBB HBB1 PEB sing 335 n n 
CBB HBB2 PEB sing 336 n n 
CGB O1B PEB doub 337 n n 
CGB O2B PEB sing 338 n n 
O2B HOB2 PEB sing 339 n n 
#
_atom_sites.entry_id                     7LIX 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 PEB B 1 201 203 PEB PEB . 
F 3 PEB B 1 202 204 PEB PEB . 
G 3 PEB B 1 203 205 PEB PEB . 
H 3 PEB C 1 201 203 PEB PEB . 
I 3 PEB C 1 202 204 PEB PEB . 
J 3 PEB C 1 203 205 PEB PEB . 
K 3 PEB D 1 201 203 PEB PEB . 
L 3 PEB D 1 202 204 PEB PEB . 
M 3 PEB D 1 203 205 PEB PEB . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHC PEB . . . M 3 118.709 226.738 390.926 1 136.49 ? CHC PEB 203 D 1 
HETATM 2 N NC PEB . . . M 3 119.744 225.062 389.209 1 136.49 ? NC PEB 203 D 1 
HETATM 3 C C1C PEB . . . M 3 119.463 223.78 388.718 1 136.49 ? C1C PEB 203 D 1 
HETATM 4 C C2C PEB . . . M 3 118.439 223.303 389.505 1 136.49 ? C2C PEB 203 D 1 
HETATM 5 C C3C PEB . . . M 3 118.069 224.292 390.443 1 136.49 ? C3C PEB 203 D 1 
HETATM 6 C C4C PEB . . . M 3 118.845 225.4 390.225 1 136.49 ? C4C PEB 203 D 1 
HETATM 7 C CMC PEB . . . M 3 116.945 224.126 391.445 1 136.49 ? CMC PEB 203 D 1 
HETATM 8 C CAC PEB . . . M 3 117.701 221.987 389.32 1 136.49 ? CAC PEB 203 D 1 
HETATM 9 C CBC PEB . . . M 3 118.47 220.745 389.844 1 136.49 ? CBC PEB 203 D 1 
HETATM 10 C CGC PEB . . . M 3 118.441 220.584 391.363 1 136.49 ? CGC PEB 203 D 1 
HETATM 11 O O1C PEB . . . M 3 117.354 220.459 391.906 1 136.49 ? O1C PEB 203 D 1 
HETATM 12 O O2C PEB . . . M 3 119.508 220.504 391.939 1 136.49 ? O2C PEB 203 D 1 
HETATM 13 N ND PEB . . . M 3 116.356 226.973 390.15 1 136.49 ? ND PEB 203 D 1 
HETATM 14 C C1D PEB . . . M 3 117.647 227.652 390.255 1 136.49 ? C1D PEB 203 D 1 
HETATM 15 C C2D PEB . . . M 3 117.243 228.884 391.066 1 136.49 ? C2D PEB 203 D 1 
HETATM 16 C C3D PEB . . . M 3 115.941 228.844 391.422 1 136.49 ? C3D PEB 203 D 1 
HETATM 17 C C4D PEB . . . M 3 115.371 227.597 390.853 1 136.49 ? C4D PEB 203 D 1 
HETATM 18 C CMD PEB . . . M 3 118.208 230.038 391.243 1 136.49 ? CMD PEB 203 D 1 
HETATM 19 C CAD PEB . . . M 3 115.078 229.929 392.012 1 136.49 ? CAD PEB 203 D 1 
HETATM 20 C CBD PEB . . . M 3 114.532 230.857 391.232 1 136.49 ? CBD PEB 203 D 1 
HETATM 21 O OD PEB . . . M 3 114.223 227.193 390.925 1 136.49 ? OD PEB 203 D 1 
HETATM 22 N NA PEB . . . M 3 122.774 225.988 382.947 1 136.49 ? NA PEB 203 D 1 
HETATM 23 C C1A PEB . . . M 3 123.145 226.591 381.798 1 136.49 ? C1A PEB 203 D 1 
HETATM 24 C C2A PEB . . . M 3 124.068 227.758 382.127 1 136.49 ? C2A PEB 203 D 1 
HETATM 25 C C3A PEB . . . M 3 124.461 227.494 383.625 1 136.49 ? C3A PEB 203 D 1 
HETATM 26 C C4A PEB . . . M 3 123.476 226.406 384.064 1 136.49 ? C4A PEB 203 D 1 
HETATM 27 C CMA PEB . . . M 3 125.262 227.858 381.142 1 136.49 ? CMA PEB 203 D 1 
HETATM 28 C CBA PEB . . . M 3 123.196 229.353 384.863 1 136.49 ? CBA PEB 203 D 1 
HETATM 29 O OA PEB . . . M 3 122.84 226.172 380.696 1 136.49 ? OA PEB 203 D 1 
HETATM 30 C CHA PEB . . . M 3 123.337 225.859 385.285 1 136.49 ? CHA PEB 203 D 1 
HETATM 31 C CAA PEB . . . M 3 124.558 228.744 384.522 1 136.49 ? CAA PEB 203 D 1 
HETATM 32 N NB PEB . . . M 3 121.623 224.762 386.618 1 136.49 ? NB PEB 203 D 1 
HETATM 33 C C1B PEB . . . M 3 122.469 224.732 385.586 1 136.49 ? C1B PEB 203 D 1 
HETATM 34 C C2B PEB . . . M 3 122.446 223.43 384.967 1 136.49 ? C2B PEB 203 D 1 
HETATM 35 C C3B PEB . . . M 3 121.553 222.661 385.638 1 136.49 ? C3B PEB 203 D 1 
HETATM 36 C C4B PEB . . . M 3 121.052 223.51 386.659 1 136.49 ? C4B PEB 203 D 1 
HETATM 37 C CHB PEB . . . M 3 120.116 223.118 387.588 1 136.49 ? CHB PEB 203 D 1 
HETATM 38 C CMB PEB . . . M 3 123.348 222.987 383.838 1 136.49 ? CMB PEB 203 D 1 
HETATM 39 C CAB PEB . . . M 3 121.198 221.209 385.407 1 136.49 ? CAB PEB 203 D 1 
HETATM 40 C CBB PEB . . . M 3 119.859 221.055 384.649 1 136.49 ? CBB PEB 203 D 1 
HETATM 41 C CGB PEB . . . M 3 119.36 219.615 384.672 1 136.49 ? CGB PEB 203 D 1 
HETATM 42 O O1B PEB . . . M 3 118.447 219.349 385.433 1 136.49 ? O1B PEB 203 D 1 
HETATM 43 O O2B PEB . . . M 3 119.899 218.813 383.934 1 136.49 ? O2B PEB 203 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           350 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#