data_7LL3 # _model_server_result.job_id '_BCuq1gFoRa89LbtAvUbvw' _model_server_result.datetime_utc '2024-11-22 18:46:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ll3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":706}' # _entry.id 7LL3 # _exptl.entry_id 7LL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7LL3 _cell.length_a 123.655 _cell.length_b 123.655 _cell.length_c 289.409 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -61.8275 107.088371 48.234833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O1B PPK . A PPK 705 1_555 H MG MG . A MG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc2 G O3G PPK . A PPK 705 1_555 I MG MG . A MG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? metalc ? metalc3 H MG MG . A MG 706 1_555 B OE2 GLU 43 B GLU 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc4 H MG MG . A MG 706 1_555 N O HOH . B HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc5 I MG MG . A MG 707 1_555 M O HOH . A HOH 832 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7LL3 _atom_sites.fract_transf_matrix[1][1] 0.008087 _atom_sites.fract_transf_matrix[1][2] 0.004669 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 701 701 EDO EDO . D 2 EDO A 1 702 1201 EDO EDO . E 2 EDO A 1 703 1301 EDO EDO . F 3 UNP A 1 704 1401 UNP UNP . G 4 PPK A 1 705 1501 PPK PPK . H 5 MG A 1 706 1 MG MG . I 5 MG A 1 707 2 MG MG . J 2 EDO B 1 701 701 EDO EDO . K 2 EDO B 1 702 801 EDO EDO . L 4 PPK B 1 703 1001 PPK PPK . M 6 HOH A 1 801 129 HOH HOH . M 6 HOH A 2 802 145 HOH HOH . M 6 HOH A 3 803 71 HOH HOH . M 6 HOH A 4 804 138 HOH HOH . M 6 HOH A 5 805 62 HOH HOH . M 6 HOH A 6 806 67 HOH HOH . M 6 HOH A 7 807 37 HOH HOH . M 6 HOH A 8 808 23 HOH HOH . M 6 HOH A 9 809 4 HOH HOH . M 6 HOH A 10 810 45 HOH HOH . M 6 HOH A 11 811 72 HOH HOH . M 6 HOH A 12 812 50 HOH HOH . M 6 HOH A 13 813 81 HOH HOH . M 6 HOH A 14 814 36 HOH HOH . M 6 HOH A 15 815 6 HOH HOH . M 6 HOH A 16 816 87 HOH HOH . M 6 HOH A 17 817 17 HOH HOH . M 6 HOH A 18 818 92 HOH HOH . M 6 HOH A 19 819 58 HOH HOH . M 6 HOH A 20 820 30 HOH HOH . M 6 HOH A 21 821 24 HOH HOH . M 6 HOH A 22 822 131 HOH HOH . M 6 HOH A 23 823 13 HOH HOH . M 6 HOH A 24 824 20 HOH HOH . M 6 HOH A 25 825 9 HOH HOH . M 6 HOH A 26 826 80 HOH HOH . M 6 HOH A 27 827 33 HOH HOH . M 6 HOH A 28 828 76 HOH HOH . M 6 HOH A 29 829 147 HOH HOH . M 6 HOH A 30 830 68 HOH HOH . M 6 HOH A 31 831 5 HOH HOH . M 6 HOH A 32 832 39 HOH HOH . M 6 HOH A 33 833 1 HOH HOH . M 6 HOH A 34 834 40 HOH HOH . M 6 HOH A 35 835 123 HOH HOH . M 6 HOH A 36 836 66 HOH HOH . M 6 HOH A 37 837 35 HOH HOH . M 6 HOH A 38 838 82 HOH HOH . M 6 HOH A 39 839 47 HOH HOH . M 6 HOH A 40 840 38 HOH HOH . M 6 HOH A 41 841 85 HOH HOH . M 6 HOH A 42 842 7 HOH HOH . M 6 HOH A 43 843 79 HOH HOH . M 6 HOH A 44 844 48 HOH HOH . M 6 HOH A 45 845 83 HOH HOH . M 6 HOH A 46 846 16 HOH HOH . M 6 HOH A 47 847 55 HOH HOH . M 6 HOH A 48 848 84 HOH HOH . M 6 HOH A 49 849 114 HOH HOH . M 6 HOH A 50 850 27 HOH HOH . M 6 HOH A 51 851 125 HOH HOH . M 6 HOH A 52 852 57 HOH HOH . M 6 HOH A 53 853 56 HOH HOH . M 6 HOH A 54 854 133 HOH HOH . M 6 HOH A 55 855 12 HOH HOH . M 6 HOH A 56 856 73 HOH HOH . M 6 HOH A 57 857 19 HOH HOH . M 6 HOH A 58 858 144 HOH HOH . M 6 HOH A 59 859 139 HOH HOH . M 6 HOH A 60 860 103 HOH HOH . M 6 HOH A 61 861 120 HOH HOH . M 6 HOH A 62 862 146 HOH HOH . M 6 HOH A 63 863 69 HOH HOH . M 6 HOH A 64 864 150 HOH HOH . M 6 HOH A 65 865 136 HOH HOH . M 6 HOH A 66 866 108 HOH HOH . M 6 HOH A 67 867 126 HOH HOH . M 6 HOH A 68 868 135 HOH HOH . M 6 HOH A 69 869 112 HOH HOH . M 6 HOH A 70 870 26 HOH HOH . M 6 HOH A 71 871 53 HOH HOH . M 6 HOH A 72 872 107 HOH HOH . N 6 HOH B 1 801 99 HOH HOH . N 6 HOH B 2 802 116 HOH HOH . N 6 HOH B 3 803 127 HOH HOH . N 6 HOH B 4 804 111 HOH HOH . N 6 HOH B 5 805 64 HOH HOH . N 6 HOH B 6 806 32 HOH HOH . N 6 HOH B 7 807 118 HOH HOH . N 6 HOH B 8 808 14 HOH HOH . N 6 HOH B 9 809 41 HOH HOH . N 6 HOH B 10 810 65 HOH HOH . N 6 HOH B 11 811 95 HOH HOH . N 6 HOH B 12 812 137 HOH HOH . N 6 HOH B 13 813 105 HOH HOH . N 6 HOH B 14 814 54 HOH HOH . N 6 HOH B 15 815 121 HOH HOH . N 6 HOH B 16 816 59 HOH HOH . N 6 HOH B 17 817 18 HOH HOH . N 6 HOH B 18 818 49 HOH HOH . N 6 HOH B 19 819 10 HOH HOH . N 6 HOH B 20 820 31 HOH HOH . N 6 HOH B 21 821 115 HOH HOH . N 6 HOH B 22 822 3 HOH HOH . N 6 HOH B 23 823 42 HOH HOH . N 6 HOH B 24 824 86 HOH HOH . N 6 HOH B 25 825 8 HOH HOH . N 6 HOH B 26 826 25 HOH HOH . N 6 HOH B 27 827 2 HOH HOH . N 6 HOH B 28 828 22 HOH HOH . N 6 HOH B 29 829 44 HOH HOH . N 6 HOH B 30 830 60 HOH HOH . N 6 HOH B 31 831 34 HOH HOH . N 6 HOH B 32 832 78 HOH HOH . N 6 HOH B 33 833 63 HOH HOH . N 6 HOH B 34 834 134 HOH HOH . N 6 HOH B 35 835 94 HOH HOH . N 6 HOH B 36 836 91 HOH HOH . N 6 HOH B 37 837 11 HOH HOH . N 6 HOH B 38 838 43 HOH HOH . N 6 HOH B 39 839 141 HOH HOH . N 6 HOH B 40 840 117 HOH HOH . N 6 HOH B 41 841 101 HOH HOH . N 6 HOH B 42 842 132 HOH HOH . N 6 HOH B 43 843 140 HOH HOH . N 6 HOH B 44 844 51 HOH HOH . N 6 HOH B 45 845 15 HOH HOH . N 6 HOH B 46 846 124 HOH HOH . N 6 HOH B 47 847 70 HOH HOH . N 6 HOH B 48 848 90 HOH HOH . N 6 HOH B 49 849 75 HOH HOH . N 6 HOH B 50 850 102 HOH HOH . N 6 HOH B 51 851 152 HOH HOH . N 6 HOH B 52 852 104 HOH HOH . N 6 HOH B 53 853 52 HOH HOH . N 6 HOH B 54 854 46 HOH HOH . N 6 HOH B 55 855 93 HOH HOH . N 6 HOH B 56 856 143 HOH HOH . N 6 HOH B 57 857 130 HOH HOH . N 6 HOH B 58 858 109 HOH HOH . N 6 HOH B 59 859 128 HOH HOH . N 6 HOH B 60 860 97 HOH HOH . N 6 HOH B 61 861 113 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -24.831 _atom_site.Cartn_y 40.492 _atom_site.Cartn_z 31.88 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 87.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 706 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #