data_7LMK # _model_server_result.job_id S6bb5oIy7Rc77VIbYHzGCQ _model_server_result.datetime_utc '2024-11-25 14:05:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lmk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":901}' # _entry.id 7LMK # _exptl.entry_id 7LMK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LMK _cell.length_a 71.06 _cell.length_b 81.372 _cell.length_c 129.653 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LMK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,M,Q 1 1 B,F,J,N 2 1 C,G,K,O 3 1 D,H,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C ARG 6 F ARG 19 1_555 E N M3L 7 F M3L 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 E C M3L 7 F M3L 20 1_555 E N VAL 8 F VAL 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 F C ARG 6 G ARG 19 1_555 F N M3L 7 G M3L 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 F C M3L 7 G M3L 20 1_555 F N VAL 8 G VAL 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 G C ARG 6 H ARG 19 1_555 G N M3L 7 H M3L 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 G C M3L 7 H M3L 20 1_555 G N VAL 8 H VAL 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 H C ARG 6 I ARG 19 1_555 H N M3L 7 I M3L 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 H C M3L 7 I M3L 20 1_555 H N VAL 8 I VAL 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A NE2 HIS 67 A HIS 790 1_555 I ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 A SG CYS 94 A CYS 817 1_555 I ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc3 A SG CYS 151 A CYS 890 1_555 I ZN ZN . A ZN 901 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc4 A SG CYS 154 A CYS 893 1_555 I ZN ZN . A ZN 901 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc5 B NE2 HIS 67 B HIS 790 1_555 J ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc6 B SG CYS 94 B CYS 817 1_555 J ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc7 B SG CYS 151 B CYS 890 1_555 J ZN ZN . B ZN 901 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc8 B SG CYS 154 B CYS 893 1_555 J ZN ZN . B ZN 901 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc9 C NE2 HIS 67 C HIS 790 1_555 K ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc10 C SG CYS 94 C CYS 817 1_555 K ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc11 C SG CYS 151 C CYS 890 1_555 K ZN ZN . C ZN 901 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc12 C SG CYS 154 C CYS 893 1_555 K ZN ZN . C ZN 901 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc13 D NE2 HIS 67 D HIS 790 1_555 L ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc14 D SG CYS 94 D CYS 817 1_555 L ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc15 D SG CYS 151 D CYS 890 1_555 L ZN ZN . D ZN 901 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc16 D SG CYS 154 D CYS 893 1_555 L ZN ZN . D ZN 901 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7LMK _atom_sites.fract_transf_matrix[1][1] 0.014073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN A 1 901 1 ZN ZN . J 3 ZN B 1 901 2 ZN ZN . K 3 ZN C 1 901 3 ZN ZN . L 3 ZN D 1 901 4 ZN ZN . M 4 HOH A 1 1001 30 HOH HOH . M 4 HOH A 2 1002 19 HOH HOH . M 4 HOH A 3 1003 5 HOH HOH . M 4 HOH A 4 1004 1 HOH HOH . M 4 HOH A 5 1005 3 HOH HOH . M 4 HOH A 6 1006 21 HOH HOH . M 4 HOH A 7 1007 10 HOH HOH . N 4 HOH B 1 1001 29 HOH HOH . N 4 HOH B 2 1002 2 HOH HOH . N 4 HOH B 3 1003 17 HOH HOH . N 4 HOH B 4 1004 11 HOH HOH . N 4 HOH B 5 1005 16 HOH HOH . N 4 HOH B 6 1006 20 HOH HOH . N 4 HOH B 7 1007 23 HOH HOH . N 4 HOH B 8 1008 24 HOH HOH . N 4 HOH B 9 1009 12 HOH HOH . O 4 HOH C 1 1001 7 HOH HOH . O 4 HOH C 2 1002 9 HOH HOH . O 4 HOH C 3 1003 13 HOH HOH . O 4 HOH C 4 1004 14 HOH HOH . O 4 HOH C 5 1005 22 HOH HOH . O 4 HOH C 6 1006 27 HOH HOH . O 4 HOH C 7 1007 15 HOH HOH . O 4 HOH C 8 1008 26 HOH HOH . P 4 HOH D 1 1001 6 HOH HOH . P 4 HOH D 2 1002 4 HOH HOH . P 4 HOH D 3 1003 8 HOH HOH . P 4 HOH D 4 1004 25 HOH HOH . P 4 HOH D 5 1005 28 HOH HOH . Q 4 HOH F 1 101 18 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 117.521 _atom_site.Cartn_y 23.736 _atom_site.Cartn_z 41.802 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 87.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 901 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #