data_7LML
#
_model_server_result.job_id            iG_rtDNPL7ou9sEKCH1ZEg 
_model_server_result.datetime_utc      '2025-03-28 17:30:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lml 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":305}' 
#
_entry.id    7LML 
#
_exptl.entry_id    7LML 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              287.054 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '6-iodanyl-1~{H}-indole-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7LML 
_cell.length_a            102.478 
_cell.length_b            102.478 
_cell.length_c            102.158 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7LML 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        171 
_symmetry.space_group_name_Hall    'P 62' 
_symmetry.space_group_name_H-M     'P 62' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 19 A CYS 38 1_555 A SG CYS 80 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 125 A CYS 144 1_555 A SG CYS 189 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 19 B CYS 38 1_555 B SG CYS 80 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 125 B CYS 144 1_555 B SG CYS 189 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C9 H6 I N O2' 
_chem_comp.formula_weight    287.054 
_chem_comp.id                Y6S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '6-iodanyl-1~{H}-indole-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
I13 C01 Y6S sing 382 n n 
C01 C06 Y6S doub 383 n y 
C01 C02 Y6S sing 384 n y 
C06 C05 Y6S sing 385 n y 
C02 C03 Y6S doub 386 n y 
C05 C04 Y6S doub 387 n y 
C03 C04 Y6S sing 388 n y 
C03 N07 Y6S sing 389 n y 
O11 C10 Y6S doub 390 n n 
C04 C09 Y6S sing 391 n y 
N07 C08 Y6S sing 392 n y 
C09 C08 Y6S doub 393 n y 
C08 C10 Y6S sing 394 n n 
C10 O12 Y6S sing 395 n n 
C02 H1 Y6S sing 396 n n 
C05 H2 Y6S sing 397 n n 
C06 H3 Y6S sing 398 n n 
C09 H4 Y6S sing 399 n n 
N07 H5 Y6S sing 400 n n 
O12 H6 Y6S sing 401 n n 
#
_atom_sites.entry_id                     7LML 
_atom_sites.fract_transf_matrix[1][1]    0.009758 
_atom_sites.fract_transf_matrix[1][2]    0.005634 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009789 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ACT A 1 301 1 ACT ACT . 
D 2 ACT A 1 302 3 ACT ACT . 
E 2 ACT A 1 303 6 ACT ACT . 
F 3 CL A 1 304 3 CL CL . 
G 4 Y6S A 1 305 4 Y6S LIG . 
H 4 Y6S A 1 306 6 Y6S LIG . 
I 4 Y6S A 1 307 8 Y6S LIG . 
J 4 Y6S A 1 308 10 Y6S LIG . 
K 2 ACT B 1 301 2 ACT ACT . 
L 2 ACT B 1 302 4 ACT ACT . 
M 2 ACT B 1 303 5 ACT ACT . 
N 3 CL B 1 304 2 CL CL . 
O 4 Y6S B 1 305 3 Y6S LIG . 
P 4 Y6S B 1 306 5 Y6S LIG . 
Q 4 Y6S B 1 307 7 Y6S LIG . 
R 4 Y6S B 1 308 9 Y6S LIG . 
S 5 HOH A 1 401 63 HOH HOH . 
S 5 HOH A 2 402 102 HOH HOH . 
S 5 HOH A 3 403 103 HOH HOH . 
S 5 HOH A 4 404 109 HOH HOH . 
S 5 HOH A 5 405 114 HOH HOH . 
S 5 HOH A 6 406 56 HOH HOH . 
S 5 HOH A 7 407 113 HOH HOH . 
S 5 HOH A 8 408 111 HOH HOH . 
S 5 HOH A 9 409 9 HOH HOH . 
S 5 HOH A 10 410 29 HOH HOH . 
S 5 HOH A 11 411 42 HOH HOH . 
S 5 HOH A 12 412 58 HOH HOH . 
S 5 HOH A 13 413 21 HOH HOH . 
S 5 HOH A 14 414 52 HOH HOH . 
S 5 HOH A 15 415 12 HOH HOH . 
S 5 HOH A 16 416 108 HOH HOH . 
S 5 HOH A 17 417 33 HOH HOH . 
S 5 HOH A 18 418 31 HOH HOH . 
S 5 HOH A 19 419 75 HOH HOH . 
S 5 HOH A 20 420 76 HOH HOH . 
S 5 HOH A 21 421 72 HOH HOH . 
S 5 HOH A 22 422 46 HOH HOH . 
S 5 HOH A 23 423 98 HOH HOH . 
S 5 HOH A 24 424 53 HOH HOH . 
S 5 HOH A 25 425 104 HOH HOH . 
S 5 HOH A 26 426 24 HOH HOH . 
S 5 HOH A 27 427 84 HOH HOH . 
S 5 HOH A 28 428 110 HOH HOH . 
S 5 HOH A 29 429 79 HOH HOH . 
S 5 HOH A 30 430 60 HOH HOH . 
S 5 HOH A 31 431 27 HOH HOH . 
S 5 HOH A 32 432 112 HOH HOH . 
S 5 HOH A 33 433 107 HOH HOH . 
S 5 HOH A 34 434 59 HOH HOH . 
S 5 HOH A 35 435 69 HOH HOH . 
S 5 HOH A 36 436 35 HOH HOH . 
S 5 HOH A 37 437 11 HOH HOH . 
S 5 HOH A 38 438 65 HOH HOH . 
S 5 HOH A 39 439 86 HOH HOH . 
S 5 HOH A 40 440 18 HOH HOH . 
S 5 HOH A 41 441 67 HOH HOH . 
S 5 HOH A 42 442 81 HOH HOH . 
S 5 HOH A 43 443 8 HOH HOH . 
S 5 HOH A 44 444 2 HOH HOH . 
S 5 HOH A 45 445 20 HOH HOH . 
S 5 HOH A 46 446 61 HOH HOH . 
S 5 HOH A 47 447 93 HOH HOH . 
S 5 HOH A 48 448 101 HOH HOH . 
S 5 HOH A 49 449 25 HOH HOH . 
S 5 HOH A 50 450 36 HOH HOH . 
S 5 HOH A 51 451 22 HOH HOH . 
S 5 HOH A 52 452 105 HOH HOH . 
S 5 HOH A 53 453 64 HOH HOH . 
S 5 HOH A 54 454 106 HOH HOH . 
S 5 HOH A 55 455 89 HOH HOH . 
S 5 HOH A 56 456 115 HOH HOH . 
S 5 HOH A 57 457 91 HOH HOH . 
S 5 HOH A 58 458 87 HOH HOH . 
S 5 HOH A 59 459 116 HOH HOH . 
S 5 HOH A 60 460 37 HOH HOH . 
S 5 HOH A 61 461 94 HOH HOH . 
S 5 HOH A 62 462 95 HOH HOH . 
T 5 HOH B 1 401 100 HOH HOH . 
T 5 HOH B 2 402 127 HOH HOH . 
T 5 HOH B 3 403 34 HOH HOH . 
T 5 HOH B 4 404 129 HOH HOH . 
T 5 HOH B 5 405 44 HOH HOH . 
T 5 HOH B 6 406 118 HOH HOH . 
T 5 HOH B 7 407 134 HOH HOH . 
T 5 HOH B 8 408 38 HOH HOH . 
T 5 HOH B 9 409 14 HOH HOH . 
T 5 HOH B 10 410 121 HOH HOH . 
T 5 HOH B 11 411 39 HOH HOH . 
T 5 HOH B 12 412 83 HOH HOH . 
T 5 HOH B 13 413 77 HOH HOH . 
T 5 HOH B 14 414 13 HOH HOH . 
T 5 HOH B 15 415 48 HOH HOH . 
T 5 HOH B 16 416 26 HOH HOH . 
T 5 HOH B 17 417 43 HOH HOH . 
T 5 HOH B 18 418 74 HOH HOH . 
T 5 HOH B 19 419 71 HOH HOH . 
T 5 HOH B 20 420 55 HOH HOH . 
T 5 HOH B 21 421 130 HOH HOH . 
T 5 HOH B 22 422 57 HOH HOH . 
T 5 HOH B 23 423 16 HOH HOH . 
T 5 HOH B 24 424 122 HOH HOH . 
T 5 HOH B 25 425 85 HOH HOH . 
T 5 HOH B 26 426 17 HOH HOH . 
T 5 HOH B 27 427 49 HOH HOH . 
T 5 HOH B 28 428 28 HOH HOH . 
T 5 HOH B 29 429 41 HOH HOH . 
T 5 HOH B 30 430 51 HOH HOH . 
T 5 HOH B 31 431 50 HOH HOH . 
T 5 HOH B 32 432 80 HOH HOH . 
T 5 HOH B 33 433 54 HOH HOH . 
T 5 HOH B 34 434 120 HOH HOH . 
T 5 HOH B 35 435 126 HOH HOH . 
T 5 HOH B 36 436 128 HOH HOH . 
T 5 HOH B 37 437 124 HOH HOH . 
T 5 HOH B 38 438 99 HOH HOH . 
T 5 HOH B 39 439 1 HOH HOH . 
T 5 HOH B 40 440 88 HOH HOH . 
T 5 HOH B 41 441 117 HOH HOH . 
T 5 HOH B 42 442 68 HOH HOH . 
T 5 HOH B 43 443 62 HOH HOH . 
T 5 HOH B 44 444 15 HOH HOH . 
T 5 HOH B 45 445 19 HOH HOH . 
T 5 HOH B 46 446 7 HOH HOH . 
T 5 HOH B 47 447 45 HOH HOH . 
T 5 HOH B 48 448 119 HOH HOH . 
T 5 HOH B 49 449 6 HOH HOH . 
T 5 HOH B 50 450 40 HOH HOH . 
T 5 HOH B 51 451 73 HOH HOH . 
T 5 HOH B 52 452 123 HOH HOH . 
T 5 HOH B 53 453 125 HOH HOH . 
T 5 HOH B 54 454 132 HOH HOH . 
T 5 HOH B 55 455 32 HOH HOH . 
T 5 HOH B 56 456 131 HOH HOH . 
T 5 HOH B 57 457 23 HOH HOH . 
T 5 HOH B 58 458 97 HOH HOH . 
T 5 HOH B 59 459 90 HOH HOH . 
T 5 HOH B 60 460 133 HOH HOH . 
T 5 HOH B 61 461 92 HOH HOH . 
T 5 HOH B 62 462 82 HOH HOH . 
T 5 HOH B 63 463 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 Y6S . . . G 4 38.26 -40.014 1.621 0.71 71.23 ? C10 Y6S 305 A 1 
HETATM 2 C C01 Y6S . . . G 4 32.087 -39.368 0.314 0.71 52.26 ? C01 Y6S 305 A 1 
HETATM 3 C C02 Y6S . . . G 4 33.087 -39.53 1.424 0.71 56.99 ? C02 Y6S 305 A 1 
HETATM 4 C C03 Y6S . . . G 4 34.619 -39.648 1.092 0.71 62.6 ? C03 Y6S 305 A 1 
HETATM 5 C C04 Y6S . . . G 4 35.066 -39.604 -0.224 0.71 50.57 ? C04 Y6S 305 A 1 
HETATM 6 C C05 Y6S . . . G 4 34.028 -39.434 -1.399 0.71 29.61 ? C05 Y6S 305 A 1 
HETATM 7 C C06 Y6S . . . G 4 32.554 -39.319 -1.098 0.71 17.47 ? C06 Y6S 305 A 1 
HETATM 8 C C08 Y6S . . . G 4 36.828 -39.85 1.121 0.71 63.71 ? C08 Y6S 305 A 1 
HETATM 9 C C09 Y6S . . . G 4 36.429 -39.728 -0.207 0.71 52.6 ? C09 Y6S 305 A 1 
HETATM 10 I I13 Y6S . . . G 4 30.044 -39.215 0.816 0.71 140.8 ? I13 Y6S 305 A 1 
HETATM 11 N N07 Y6S . . . G 4 35.708 -39.799 1.91 0.71 64.08 ? N07 Y6S 305 A 1 
HETATM 12 O O11 Y6S . . . G 4 39.227 -39.706 0.876 0.71 71.74 ? O11 Y6S 305 A 1 
HETATM 13 O O12 Y6S . . . G 4 38.471 -40.46 2.781 0.71 56.59 ? O12 Y6S 305 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           13 
#