data_7LMW # _model_server_result.job_id '_U2V9nCOdiScuyiRI2qkyw' _model_server_result.datetime_utc '2025-03-29 21:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":504}' # _entry.id 7LMW # _exptl.entry_id 7LMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.245 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '7-methyl-3-(1~{H}-pyrazol-4-yl)-1~{H}-indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7LMW _cell.length_a 101.885 _cell.length_b 101.885 _cell.length_c 102.306 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 19 A CYS 38 1_555 A SG CYS 80 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 125 A CYS 144 1_555 A SG CYS 189 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 19 B CYS 38 1_555 B SG CYS 80 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 125 B CYS 144 1_555 B SG CYS 189 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C13 H11 N3 O2' _chem_comp.formula_weight 241.245 _chem_comp.id Y6P _chem_comp.mon_nstd_flag . _chem_comp.name '7-methyl-3-(1~{H}-pyrazol-4-yl)-1~{H}-indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C05 Y6P sing 382 n n C06 C05 Y6P doub 383 n y C06 C01 Y6P sing 384 n y C05 C04 Y6P sing 385 n y C01 C02 Y6P doub 386 n y C04 N09 Y6P sing 387 n y C04 C03 Y6P doub 388 n y N09 C08 Y6P sing 389 n y O17 C15 Y6P doub 390 n n C02 C03 Y6P sing 391 n y C03 C07 Y6P sing 392 n y C11 N12 Y6P sing 393 n y C11 C10 Y6P doub 394 n y C08 C07 Y6P doub 395 n y C08 C15 Y6P sing 396 n n C07 C10 Y6P sing 397 n n C15 O16 Y6P sing 398 n n N12 N13 Y6P sing 399 n y C10 C14 Y6P sing 400 n y N13 C14 Y6P doub 401 n y N12 H1 Y6P sing 402 n n C01 H2 Y6P sing 403 n n C02 H3 Y6P sing 404 n n C06 H4 Y6P sing 405 n n C11 H5 Y6P sing 406 n n C14 H6 Y6P sing 407 n n C18 H7 Y6P sing 408 n n C18 H8 Y6P sing 409 n n C18 H9 Y6P sing 410 n n N09 H10 Y6P sing 411 n n O16 H11 Y6P sing 412 n n # _atom_sites.entry_id 7LMW _atom_sites.fract_transf_matrix[1][1] 0.009815 _atom_sites.fract_transf_matrix[1][2] 0.005667 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011333 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y6P A 1 401 401 Y6P LIG . D 2 Y6P A 1 402 703 Y6P LIG . E 3 ACT A 1 403 301 ACT ACT . F 3 ACT A 1 404 503 ACT ACT . G 2 Y6P B 1 501 501 Y6P LIG . H 2 Y6P B 1 502 601 Y6P LIG . I 2 Y6P B 1 503 701 Y6P LIG . J 2 Y6P B 1 504 702 Y6P LIG . K 4 CL B 1 505 1 CL CL . L 3 ACT B 1 506 701 ACT ACT . M 3 ACT B 1 507 902 ACT ACT . N 3 ACT B 1 508 903 ACT ACT . O 5 HOH A 1 501 18 HOH HOH . O 5 HOH A 2 502 16 HOH HOH . O 5 HOH A 3 503 24 HOH HOH . O 5 HOH A 4 504 37 HOH HOH . O 5 HOH A 5 505 26 HOH HOH . O 5 HOH A 6 506 36 HOH HOH . O 5 HOH A 7 507 29 HOH HOH . O 5 HOH A 8 508 31 HOH HOH . O 5 HOH A 9 509 45 HOH HOH . O 5 HOH A 10 510 14 HOH HOH . O 5 HOH A 11 511 9 HOH HOH . O 5 HOH A 12 512 38 HOH HOH . O 5 HOH A 13 513 6 HOH HOH . O 5 HOH A 14 514 21 HOH HOH . O 5 HOH A 15 515 33 HOH HOH . O 5 HOH A 16 516 2 HOH HOH . O 5 HOH A 17 517 23 HOH HOH . O 5 HOH A 18 518 22 HOH HOH . O 5 HOH A 19 519 39 HOH HOH . O 5 HOH A 20 520 41 HOH HOH . P 5 HOH B 1 601 19 HOH HOH . P 5 HOH B 2 602 34 HOH HOH . P 5 HOH B 3 603 11 HOH HOH . P 5 HOH B 4 604 42 HOH HOH . P 5 HOH B 5 605 13 HOH HOH . P 5 HOH B 6 606 8 HOH HOH . P 5 HOH B 7 607 25 HOH HOH . P 5 HOH B 8 608 28 HOH HOH . P 5 HOH B 9 609 4 HOH HOH . P 5 HOH B 10 610 30 HOH HOH . P 5 HOH B 11 611 27 HOH HOH . P 5 HOH B 12 612 46 HOH HOH . P 5 HOH B 13 613 17 HOH HOH . P 5 HOH B 14 614 43 HOH HOH . P 5 HOH B 15 615 12 HOH HOH . P 5 HOH B 16 616 32 HOH HOH . P 5 HOH B 17 617 7 HOH HOH . P 5 HOH B 18 618 20 HOH HOH . P 5 HOH B 19 619 44 HOH HOH . P 5 HOH B 20 620 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Y6P . . . J 2 -45.335 -42.797 19.204 0.84 64.08 ? C10 Y6P 504 B 1 HETATM 2 N N12 Y6P . . . J 2 -47.434 -42.746 18.626 0.84 76.33 ? N12 Y6P 504 B 1 HETATM 3 C C15 Y6P . . . J 2 -42.363 -41.755 18.267 0.84 69.25 ? C15 Y6P 504 B 1 HETATM 4 C C01 Y6P . . . J 2 -44.445 -44.632 23.666 0.84 59.66 ? C01 Y6P 504 B 1 HETATM 5 C C02 Y6P . . . J 2 -44.94 -44.126 22.319 0.84 55.2 ? C02 Y6P 504 B 1 HETATM 6 C C03 Y6P . . . J 2 -43.94 -43.448 21.296 0.84 53.28 ? C03 Y6P 504 B 1 HETATM 7 C C04 Y6P . . . J 2 -42.608 -43.341 21.66 0.84 56.09 ? C04 Y6P 504 B 1 HETATM 8 C C05 Y6P . . . J 2 -42.055 -43.85 23.047 0.84 59.95 ? C05 Y6P 504 B 1 HETATM 9 C C06 Y6P . . . J 2 -43.004 -44.504 24.05 0.84 47.84 ? C06 Y6P 504 B 1 HETATM 10 C C07 Y6P . . . J 2 -44.058 -42.9 20.032 0.84 55.21 ? C07 Y6P 504 B 1 HETATM 11 C C08 Y6P . . . J 2 -42.79 -42.445 19.604 0.84 63.53 ? C08 Y6P 504 B 1 HETATM 12 C C11 Y6P . . . J 2 -46.615 -42.928 19.671 0.84 67.53 ? C11 Y6P 504 B 1 HETATM 13 C C14 Y6P . . . J 2 -45.396 -42.535 17.85 0.84 68.28 ? C14 Y6P 504 B 1 HETATM 14 C C18 Y6P . . . J 2 -40.546 -43.647 23.293 0.84 39.72 ? C18 Y6P 504 B 1 HETATM 15 N N09 Y6P . . . J 2 -41.93 -42.734 20.633 0.84 67.07 ? N09 Y6P 504 B 1 HETATM 16 N N13 Y6P . . . J 2 -46.674 -42.504 17.478 0.84 63.25 ? N13 Y6P 504 B 1 HETATM 17 O O16 Y6P . . . J 2 -41.806 -40.6 18.218 0.84 56.7 ? O16 Y6P 504 B 1 HETATM 18 O O17 Y6P . . . J 2 -42.532 -42.365 17.171 0.84 69.31 ? O17 Y6P 504 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 18 #