data_7LNH # _model_server_result.job_id 6ZmZk7tV1ohr4QOJnjej4A _model_server_result.datetime_utc '2024-11-15 23:32:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 7LNH # _exptl.entry_id 7LNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7LNH _cell.length_a 144.191 _cell.length_b 144.191 _cell.length_c 188.196 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall 'P 6c 2c' _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 94.098 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7LNH _atom_sites.fract_transf_matrix[1][1] 0.006935 _atom_sites.fract_transf_matrix[1][2] 0.004004 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008008 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 YQP A 1 601 601 YQP DRG . D 3 EDO B 1 501 501 EDO EDO . E 2 YQP B 1 502 601 YQP DRG . F 4 HOH A 1 701 30 HOH HOH . F 4 HOH A 2 702 9 HOH HOH . F 4 HOH A 3 703 1 HOH HOH . F 4 HOH A 4 704 7 HOH HOH . F 4 HOH A 5 705 12 HOH HOH . F 4 HOH A 6 706 4 HOH HOH . F 4 HOH A 7 707 10 HOH HOH . G 4 HOH B 1 601 20 HOH HOH . G 4 HOH B 2 602 26 HOH HOH . G 4 HOH B 3 603 28 HOH HOH . G 4 HOH B 4 604 14 HOH HOH . G 4 HOH B 5 605 24 HOH HOH . G 4 HOH B 6 606 8 HOH HOH . G 4 HOH B 7 607 23 HOH HOH . G 4 HOH B 8 608 21 HOH HOH . G 4 HOH B 9 609 31 HOH HOH . G 4 HOH B 10 610 17 HOH HOH . G 4 HOH B 11 611 3 HOH HOH . G 4 HOH B 12 612 27 HOH HOH . G 4 HOH B 13 613 5 HOH HOH . G 4 HOH B 14 614 18 HOH HOH . G 4 HOH B 15 615 32 HOH HOH . G 4 HOH B 16 616 2 HOH HOH . G 4 HOH B 17 617 33 HOH HOH . G 4 HOH B 18 618 6 HOH HOH . G 4 HOH B 19 619 15 HOH HOH . G 4 HOH B 20 620 25 HOH HOH . G 4 HOH B 21 621 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -1.651 -71.584 36.033 1 99.73 ? C1 EDO 501 B 1 HETATM 2 O O1 EDO . . . D 3 -0.748 -70.637 36.615 1 93.54 ? O1 EDO 501 B 1 HETATM 3 C C2 EDO . . . D 3 -1.131 -72.016 34.667 1 113.48 ? C2 EDO 501 B 1 HETATM 4 O O2 EDO . . . D 3 0.083 -72.759 34.83 1 109.06 ? O2 EDO 501 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #