data_7LNU # _model_server_result.job_id kO7cTx7ImIW7pnx8WiOqRg _model_server_result.datetime_utc '2025-02-23 11:40:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lnu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 7LNU # _exptl.entry_id 7LNU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LNU _cell.length_a 40.892 _cell.length_b 74.503 _cell.length_c 171.691 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LNU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 114 n n PG O2G ATP sing 115 n n PG O3G ATP sing 116 n n PG O3B ATP sing 117 n n O2G HOG2 ATP sing 118 n n O3G HOG3 ATP sing 119 n n PB O1B ATP doub 120 n n PB O2B ATP sing 121 n n PB O3B ATP sing 122 n n PB O3A ATP sing 123 n n O2B HOB2 ATP sing 124 n n PA O1A ATP doub 125 n n PA O2A ATP sing 126 n n PA O3A ATP sing 127 n n PA O5' ATP sing 128 n n O2A HOA2 ATP sing 129 n n O5' C5' ATP sing 130 n n C5' C4' ATP sing 131 n n C5' "H5'1" ATP sing 132 n n C5' "H5'2" ATP sing 133 n n C4' O4' ATP sing 134 n n C4' C3' ATP sing 135 n n C4' H4' ATP sing 136 n n O4' C1' ATP sing 137 n n C3' O3' ATP sing 138 n n C3' C2' ATP sing 139 n n C3' H3' ATP sing 140 n n O3' HO3' ATP sing 141 n n C2' O2' ATP sing 142 n n C2' C1' ATP sing 143 n n C2' H2' ATP sing 144 n n O2' HO2' ATP sing 145 n n C1' N9 ATP sing 146 n n C1' H1' ATP sing 147 n n N9 C8 ATP sing 148 n y N9 C4 ATP sing 149 n y C8 N7 ATP doub 150 n y C8 H8 ATP sing 151 n n N7 C5 ATP sing 152 n y C5 C6 ATP sing 153 n y C5 C4 ATP doub 154 n y C6 N6 ATP sing 155 n n C6 N1 ATP doub 156 n y N6 HN61 ATP sing 157 n n N6 HN62 ATP sing 158 n n N1 C2 ATP sing 159 n y C2 N3 ATP doub 160 n y C2 H2 ATP sing 161 n n N3 C4 ATP sing 162 n y # _atom_sites.entry_id 7LNU _atom_sites.fract_transf_matrix[1][1] 0.024455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IP8 A 1 301 300 IP8 IP8 . D 3 ADP A 1 302 400 ADP ADP . E 4 ATP A 1 303 401 ATP ATP . F 5 IPE A 1 304 301 IPE IPE . G 2 IP8 B 1 301 300 IP8 IP8 . H 3 ADP B 1 302 400 ADP ADP . I 6 HOH A 1 401 162 HOH HOH . I 6 HOH A 2 402 17 HOH HOH . I 6 HOH A 3 403 161 HOH HOH . I 6 HOH A 4 404 18 HOH HOH . I 6 HOH A 5 405 106 HOH HOH . I 6 HOH A 6 406 48 HOH HOH . I 6 HOH A 7 407 133 HOH HOH . I 6 HOH A 8 408 22 HOH HOH . I 6 HOH A 9 409 61 HOH HOH . I 6 HOH A 10 410 88 HOH HOH . I 6 HOH A 11 411 9 HOH HOH . I 6 HOH A 12 412 103 HOH HOH . I 6 HOH A 13 413 163 HOH HOH . I 6 HOH A 14 414 37 HOH HOH . I 6 HOH A 15 415 176 HOH HOH . I 6 HOH A 16 416 5 HOH HOH . I 6 HOH A 17 417 36 HOH HOH . I 6 HOH A 18 418 39 HOH HOH . I 6 HOH A 19 419 64 HOH HOH . I 6 HOH A 20 420 63 HOH HOH . I 6 HOH A 21 421 15 HOH HOH . I 6 HOH A 22 422 136 HOH HOH . I 6 HOH A 23 423 92 HOH HOH . I 6 HOH A 24 424 119 HOH HOH . I 6 HOH A 25 425 29 HOH HOH . I 6 HOH A 26 426 32 HOH HOH . I 6 HOH A 27 427 110 HOH HOH . I 6 HOH A 28 428 31 HOH HOH . I 6 HOH A 29 429 14 HOH HOH . I 6 HOH A 30 430 124 HOH HOH . I 6 HOH A 31 431 65 HOH HOH . I 6 HOH A 32 432 175 HOH HOH . I 6 HOH A 33 433 45 HOH HOH . I 6 HOH A 34 434 151 HOH HOH . I 6 HOH A 35 435 4 HOH HOH . I 6 HOH A 36 436 105 HOH HOH . I 6 HOH A 37 437 98 HOH HOH . I 6 HOH A 38 438 158 HOH HOH . I 6 HOH A 39 439 20 HOH HOH . I 6 HOH A 40 440 94 HOH HOH . I 6 HOH A 41 441 52 HOH HOH . I 6 HOH A 42 442 51 HOH HOH . I 6 HOH A 43 443 56 HOH HOH . I 6 HOH A 44 444 107 HOH HOH . I 6 HOH A 45 445 99 HOH HOH . I 6 HOH A 46 446 40 HOH HOH . I 6 HOH A 47 447 35 HOH HOH . I 6 HOH A 48 448 170 HOH HOH . I 6 HOH A 49 449 66 HOH HOH . I 6 HOH A 50 450 72 HOH HOH . I 6 HOH A 51 451 75 HOH HOH . I 6 HOH A 52 452 1 HOH HOH . I 6 HOH A 53 453 69 HOH HOH . I 6 HOH A 54 454 168 HOH HOH . I 6 HOH A 55 455 12 HOH HOH . I 6 HOH A 56 456 148 HOH HOH . I 6 HOH A 57 457 73 HOH HOH . I 6 HOH A 58 458 132 HOH HOH . I 6 HOH A 59 459 2 HOH HOH . I 6 HOH A 60 460 139 HOH HOH . I 6 HOH A 61 461 169 HOH HOH . I 6 HOH A 62 462 144 HOH HOH . I 6 HOH A 63 463 149 HOH HOH . I 6 HOH A 64 464 174 HOH HOH . I 6 HOH A 65 465 173 HOH HOH . I 6 HOH A 66 466 129 HOH HOH . I 6 HOH A 67 467 118 HOH HOH . I 6 HOH A 68 468 79 HOH HOH . I 6 HOH A 69 469 108 HOH HOH . I 6 HOH A 70 470 121 HOH HOH . I 6 HOH A 71 471 147 HOH HOH . J 6 HOH B 1 401 23 HOH HOH . J 6 HOH B 2 402 68 HOH HOH . J 6 HOH B 3 403 166 HOH HOH . J 6 HOH B 4 404 49 HOH HOH . J 6 HOH B 5 405 77 HOH HOH . J 6 HOH B 6 406 153 HOH HOH . J 6 HOH B 7 407 130 HOH HOH . J 6 HOH B 8 408 16 HOH HOH . J 6 HOH B 9 409 67 HOH HOH . J 6 HOH B 10 410 7 HOH HOH . J 6 HOH B 11 411 57 HOH HOH . J 6 HOH B 12 412 113 HOH HOH . J 6 HOH B 13 413 178 HOH HOH . J 6 HOH B 14 414 26 HOH HOH . J 6 HOH B 15 415 146 HOH HOH . J 6 HOH B 16 416 55 HOH HOH . J 6 HOH B 17 417 43 HOH HOH . J 6 HOH B 18 418 47 HOH HOH . J 6 HOH B 19 419 42 HOH HOH . J 6 HOH B 20 420 58 HOH HOH . J 6 HOH B 21 421 6 HOH HOH . J 6 HOH B 22 422 114 HOH HOH . J 6 HOH B 23 423 10 HOH HOH . J 6 HOH B 24 424 83 HOH HOH . J 6 HOH B 25 425 71 HOH HOH . J 6 HOH B 26 426 11 HOH HOH . J 6 HOH B 27 427 33 HOH HOH . J 6 HOH B 28 428 41 HOH HOH . J 6 HOH B 29 429 70 HOH HOH . J 6 HOH B 30 430 54 HOH HOH . J 6 HOH B 31 431 172 HOH HOH . J 6 HOH B 32 432 95 HOH HOH . J 6 HOH B 33 433 21 HOH HOH . J 6 HOH B 34 434 3 HOH HOH . J 6 HOH B 35 435 50 HOH HOH . J 6 HOH B 36 436 112 HOH HOH . J 6 HOH B 37 437 13 HOH HOH . J 6 HOH B 38 438 97 HOH HOH . J 6 HOH B 39 439 27 HOH HOH . J 6 HOH B 40 440 62 HOH HOH . J 6 HOH B 41 441 116 HOH HOH . J 6 HOH B 42 442 87 HOH HOH . J 6 HOH B 43 443 85 HOH HOH . J 6 HOH B 44 444 80 HOH HOH . J 6 HOH B 45 445 90 HOH HOH . J 6 HOH B 46 446 59 HOH HOH . J 6 HOH B 47 447 86 HOH HOH . J 6 HOH B 48 448 8 HOH HOH . J 6 HOH B 49 449 111 HOH HOH . J 6 HOH B 50 450 28 HOH HOH . J 6 HOH B 51 451 19 HOH HOH . J 6 HOH B 52 452 145 HOH HOH . J 6 HOH B 53 453 24 HOH HOH . J 6 HOH B 54 454 53 HOH HOH . J 6 HOH B 55 455 30 HOH HOH . J 6 HOH B 56 456 150 HOH HOH . J 6 HOH B 57 457 78 HOH HOH . J 6 HOH B 58 458 138 HOH HOH . J 6 HOH B 59 459 164 HOH HOH . J 6 HOH B 60 460 131 HOH HOH . J 6 HOH B 61 461 89 HOH HOH . J 6 HOH B 62 462 135 HOH HOH . J 6 HOH B 63 463 46 HOH HOH . J 6 HOH B 64 464 160 HOH HOH . J 6 HOH B 65 465 34 HOH HOH . J 6 HOH B 66 466 137 HOH HOH . J 6 HOH B 67 467 74 HOH HOH . J 6 HOH B 68 468 101 HOH HOH . J 6 HOH B 69 469 91 HOH HOH . J 6 HOH B 70 470 76 HOH HOH . J 6 HOH B 71 471 142 HOH HOH . J 6 HOH B 72 472 143 HOH HOH . J 6 HOH B 73 473 25 HOH HOH . J 6 HOH B 74 474 115 HOH HOH . J 6 HOH B 75 475 140 HOH HOH . J 6 HOH B 76 476 177 HOH HOH . J 6 HOH B 77 477 84 HOH HOH . J 6 HOH B 78 478 102 HOH HOH . J 6 HOH B 79 479 81 HOH HOH . J 6 HOH B 80 480 127 HOH HOH . J 6 HOH B 81 481 154 HOH HOH . J 6 HOH B 82 482 159 HOH HOH . J 6 HOH B 83 483 141 HOH HOH . J 6 HOH B 84 484 123 HOH HOH . J 6 HOH B 85 485 155 HOH HOH . J 6 HOH B 86 486 117 HOH HOH . J 6 HOH B 87 487 82 HOH HOH . J 6 HOH B 88 488 165 HOH HOH . J 6 HOH B 89 489 171 HOH HOH . J 6 HOH B 90 490 60 HOH HOH . J 6 HOH B 91 491 167 HOH HOH . J 6 HOH B 92 492 125 HOH HOH . J 6 HOH B 93 493 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . A . E 4 -3.795 -6.619 37.924 0.4 33.81 ? PG ATP 303 A 1 HETATM 2 O O1G ATP . A . E 4 -4.775 -6.967 36.832 0.4 26.68 ? O1G ATP 303 A 1 HETATM 3 O O2G ATP . A . E 4 -4.44 -6.206 39.225 0.4 34.53 ? O2G ATP 303 A 1 HETATM 4 O O3G ATP . A . E 4 -2.676 -5.706 37.484 0.4 34.7 ? O3G ATP 303 A 1 HETATM 5 P PB ATP . A . E 4 -2.762 -8.592 39.681 0.4 35.76 ? PB ATP 303 A 1 HETATM 6 O O1B ATP . A . E 4 -3.997 -8.428 40.535 0.4 36.32 ? O1B ATP 303 A 1 HETATM 7 O O2B ATP . A . E 4 -2.164 -9.97 39.52 0.4 31.17 ? O2B ATP 303 A 1 HETATM 8 O O3B ATP . A . E 4 -3.038 -8.015 38.203 0.4 36.18 ? O3B ATP 303 A 1 HETATM 9 P PA ATP . A . E 4 -1.418 -7.088 41.677 0.4 41.49 ? PA ATP 303 A 1 HETATM 10 O O1A ATP . A . E 4 -2.445 -7.741 42.571 0.4 39.83 ? O1A ATP 303 A 1 HETATM 11 O O2A ATP . A . E 4 -1.33 -5.581 41.644 0.4 41.9 ? O2A ATP 303 A 1 HETATM 12 O O3A ATP . A . E 4 -1.572 -7.622 40.166 0.4 38.98 ? O3A ATP 303 A 1 HETATM 13 O O5' ATP . A . E 4 0.013 -7.678 42.099 0.4 44.68 ? O5' ATP 303 A 1 HETATM 14 C C5' ATP . A . E 4 0.284 -7.902 43.477 0.4 45.58 ? C5' ATP 303 A 1 HETATM 15 C C4' ATP . A . E 4 1.707 -7.456 43.763 0.4 48.68 ? C4' ATP 303 A 1 HETATM 16 O O4' ATP . A . E 4 1.71 -6.49 44.815 0.4 51.94 ? O4' ATP 303 A 1 HETATM 17 C C3' ATP . A . E 4 2.583 -8.613 44.207 0.4 48.73 ? C3' ATP 303 A 1 HETATM 18 O O3' ATP . A . E 4 3.478 -8.984 43.155 0.4 50.07 ? O3' ATP 303 A 1 HETATM 19 C C2' ATP . A . E 4 3.359 -8.086 45.396 0.4 52.27 ? C2' ATP 303 A 1 HETATM 20 O O2' ATP . A . E 4 4.756 -8.063 45.091 0.4 51.13 ? O2' ATP 303 A 1 HETATM 21 C C1' ATP . A . E 4 2.871 -6.664 45.628 0.4 53.17 ? C1' ATP 303 A 1 HETATM 22 N N9 ATP . A . E 4 2.537 -6.456 47.06 0.4 54.52 ? N9 ATP 303 A 1 HETATM 23 C C8 ATP . A . E 4 3.096 -5.529 47.86 0.4 54.77 ? C8 ATP 303 A 1 HETATM 24 N N7 ATP . A . E 4 2.587 -5.592 49.116 0.4 55.93 ? N7 ATP 303 A 1 HETATM 25 C C5 ATP . A . E 4 1.678 -6.583 49.133 0.4 55.03 ? C5 ATP 303 A 1 HETATM 26 C C6 ATP . A . E 4 0.771 -7.178 50.143 0.4 55.15 ? C6 ATP 303 A 1 HETATM 27 N N6 ATP . A . E 4 0.737 -6.713 51.415 0.4 58.67 ? N6 ATP 303 A 1 HETATM 28 N N1 ATP . A . E 4 -0.02 -8.201 49.753 0.4 53.05 ? N1 ATP 303 A 1 HETATM 29 C C2 ATP . A . E 4 0.007 -8.669 48.493 0.4 53.37 ? C2 ATP 303 A 1 HETATM 30 N N3 ATP . A . E 4 0.802 -8.179 47.525 0.4 54.04 ? N3 ATP 303 A 1 HETATM 31 C C4 ATP . A . E 4 1.651 -7.153 47.778 0.4 54.78 ? C4 ATP 303 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 1232 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #