data_7LOV # _model_server_result.job_id sFAFoTArsg_l81cPuwPtxg _model_server_result.datetime_utc '2024-11-07 15:48:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lov # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":605}' # _entry.id 7LOV # _exptl.entry_id 7LOV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.43 _cell.angle_gamma 90 _cell.entry_id 7LOV _cell.length_a 152.589 _cell.length_b 82.676 _cell.length_c 113.227 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LOV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 289 A ASP 288 1_555 H MN MN . A MN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc2 A OE1 GLU 516 A GLU 515 1_555 H MN MN . A MN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 D O1A UDP . A UDP 602 1_555 H MN MN . A MN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 D O2B UDP . A UDP 602 1_555 H MN MN . A MN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc5 H MN MN . A MN 606 1_555 N O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc6 H MN MN . A MN 606 1_555 N O HOH . A HOH 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc7 B OD2 ASP 289 B ASP 288 1_555 M MN MN . B MN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc8 B OE1 GLU 516 B GLU 515 1_555 M MN MN . B MN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc9 J O1A UDP . B UDP 602 1_555 M MN MN . B MN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc10 J O3B UDP . B UDP 602 1_555 M MN MN . B MN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc11 M MN MN . B MN 605 1_555 O O HOH . B HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc12 M MN MN . B MN 605 1_555 O O HOH . B HOH 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7LOV _atom_sites.fract_transf_matrix[1][1] 0.006554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000278 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00884 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NOY A 1 601 602 NOY MNM . D 3 UDP A 1 602 702 UDP UDP . E 4 GOL A 1 603 701 GOL GOL . F 4 GOL A 1 604 601 GOL GOL . G 4 GOL A 1 605 501 GOL GOL . H 5 MN A 1 606 1 MN MN . I 2 NOY B 1 601 601 NOY MNM . J 3 UDP B 1 602 701 UDP UDP . K 4 GOL B 1 603 801 GOL GOL . L 4 GOL B 1 604 901 GOL GOL . M 5 MN B 1 605 2 MN MN . N 6 HOH A 1 701 526 HOH HOH . N 6 HOH A 2 702 570 HOH HOH . N 6 HOH A 3 703 529 HOH HOH . N 6 HOH A 4 704 492 HOH HOH . N 6 HOH A 5 705 500 HOH HOH . N 6 HOH A 6 706 577 HOH HOH . N 6 HOH A 7 707 75 HOH HOH . N 6 HOH A 8 708 484 HOH HOH . N 6 HOH A 9 709 520 HOH HOH . N 6 HOH A 10 710 97 HOH HOH . N 6 HOH A 11 711 51 HOH HOH . N 6 HOH A 12 712 565 HOH HOH . N 6 HOH A 13 713 574 HOH HOH . N 6 HOH A 14 714 486 HOH HOH . N 6 HOH A 15 715 479 HOH HOH . N 6 HOH A 16 716 1 HOH HOH . N 6 HOH A 17 717 78 HOH HOH . N 6 HOH A 18 718 6 HOH HOH . N 6 HOH A 19 719 163 HOH HOH . N 6 HOH A 20 720 536 HOH HOH . N 6 HOH A 21 721 108 HOH HOH . N 6 HOH A 22 722 159 HOH HOH . N 6 HOH A 23 723 535 HOH HOH . N 6 HOH A 24 724 531 HOH HOH . N 6 HOH A 25 725 482 HOH HOH . N 6 HOH A 26 726 567 HOH HOH . N 6 HOH A 27 727 155 HOH HOH . N 6 HOH A 28 728 564 HOH HOH . N 6 HOH A 29 729 527 HOH HOH . N 6 HOH A 30 730 515 HOH HOH . N 6 HOH A 31 731 497 HOH HOH . N 6 HOH A 32 732 518 HOH HOH . N 6 HOH A 33 733 489 HOH HOH . N 6 HOH A 34 734 477 HOH HOH . N 6 HOH A 35 735 487 HOH HOH . N 6 HOH A 36 736 56 HOH HOH . N 6 HOH A 37 737 382 HOH HOH . N 6 HOH A 38 738 494 HOH HOH . N 6 HOH A 39 739 94 HOH HOH . N 6 HOH A 40 740 9 HOH HOH . N 6 HOH A 41 741 17 HOH HOH . N 6 HOH A 42 742 572 HOH HOH . N 6 HOH A 43 743 139 HOH HOH . N 6 HOH A 44 744 234 HOH HOH . N 6 HOH A 45 745 345 HOH HOH . N 6 HOH A 46 746 575 HOH HOH . N 6 HOH A 47 747 131 HOH HOH . N 6 HOH A 48 748 538 HOH HOH . N 6 HOH A 49 749 91 HOH HOH . N 6 HOH A 50 750 179 HOH HOH . N 6 HOH A 51 751 70 HOH HOH . N 6 HOH A 52 752 543 HOH HOH . N 6 HOH A 53 753 198 HOH HOH . N 6 HOH A 54 754 369 HOH HOH . N 6 HOH A 55 755 470 HOH HOH . N 6 HOH A 56 756 493 HOH HOH . N 6 HOH A 57 757 3 HOH HOH . N 6 HOH A 58 758 496 HOH HOH . N 6 HOH A 59 759 573 HOH HOH . N 6 HOH A 60 760 206 HOH HOH . N 6 HOH A 61 761 539 HOH HOH . N 6 HOH A 62 762 237 HOH HOH . N 6 HOH A 63 763 532 HOH HOH . N 6 HOH A 64 764 257 HOH HOH . N 6 HOH A 65 765 44 HOH HOH . N 6 HOH A 66 766 191 HOH HOH . N 6 HOH A 67 767 54 HOH HOH . N 6 HOH A 68 768 480 HOH HOH . N 6 HOH A 69 769 517 HOH HOH . N 6 HOH A 70 770 508 HOH HOH . N 6 HOH A 71 771 319 HOH HOH . N 6 HOH A 72 772 24 HOH HOH . N 6 HOH A 73 773 16 HOH HOH . N 6 HOH A 74 774 523 HOH HOH . N 6 HOH A 75 775 246 HOH HOH . N 6 HOH A 76 776 542 HOH HOH . N 6 HOH A 77 777 87 HOH HOH . N 6 HOH A 78 778 481 HOH HOH . N 6 HOH A 79 779 8 HOH HOH . N 6 HOH A 80 780 141 HOH HOH . N 6 HOH A 81 781 29 HOH HOH . N 6 HOH A 82 782 235 HOH HOH . N 6 HOH A 83 783 533 HOH HOH . N 6 HOH A 84 784 76 HOH HOH . N 6 HOH A 85 785 60 HOH HOH . N 6 HOH A 86 786 140 HOH HOH . N 6 HOH A 87 787 136 HOH HOH . N 6 HOH A 88 788 68 HOH HOH . N 6 HOH A 89 789 503 HOH HOH . N 6 HOH A 90 790 311 HOH HOH . N 6 HOH A 91 791 175 HOH HOH . N 6 HOH A 92 792 112 HOH HOH . N 6 HOH A 93 793 83 HOH HOH . N 6 HOH A 94 794 541 HOH HOH . N 6 HOH A 95 795 476 HOH HOH . N 6 HOH A 96 796 412 HOH HOH . N 6 HOH A 97 797 254 HOH HOH . N 6 HOH A 98 798 513 HOH HOH . N 6 HOH A 99 799 462 HOH HOH . N 6 HOH A 100 800 568 HOH HOH . N 6 HOH A 101 801 528 HOH HOH . N 6 HOH A 102 802 288 HOH HOH . N 6 HOH A 103 803 571 HOH HOH . N 6 HOH A 104 804 537 HOH HOH . N 6 HOH A 105 805 514 HOH HOH . N 6 HOH A 106 806 463 HOH HOH . N 6 HOH A 107 807 544 HOH HOH . N 6 HOH A 108 808 63 HOH HOH . N 6 HOH A 109 809 548 HOH HOH . N 6 HOH A 110 810 464 HOH HOH . N 6 HOH A 111 811 554 HOH HOH . N 6 HOH A 112 812 105 HOH HOH . N 6 HOH A 113 813 22 HOH HOH . N 6 HOH A 114 814 499 HOH HOH . N 6 HOH A 115 815 160 HOH HOH . N 6 HOH A 116 816 504 HOH HOH . N 6 HOH A 117 817 458 HOH HOH . N 6 HOH A 118 818 488 HOH HOH . N 6 HOH A 119 819 230 HOH HOH . N 6 HOH A 120 820 182 HOH HOH . N 6 HOH A 121 821 459 HOH HOH . N 6 HOH A 122 822 483 HOH HOH . O 6 HOH B 1 701 495 HOH HOH . O 6 HOH B 2 702 220 HOH HOH . O 6 HOH B 3 703 12 HOH HOH . O 6 HOH B 4 704 524 HOH HOH . O 6 HOH B 5 705 64 HOH HOH . O 6 HOH B 6 706 118 HOH HOH . O 6 HOH B 7 707 472 HOH HOH . O 6 HOH B 8 708 421 HOH HOH . O 6 HOH B 9 709 473 HOH HOH . O 6 HOH B 10 710 521 HOH HOH . O 6 HOH B 11 711 576 HOH HOH . O 6 HOH B 12 712 86 HOH HOH . O 6 HOH B 13 713 107 HOH HOH . O 6 HOH B 14 714 569 HOH HOH . O 6 HOH B 15 715 474 HOH HOH . O 6 HOH B 16 716 295 HOH HOH . O 6 HOH B 17 717 512 HOH HOH . O 6 HOH B 18 718 491 HOH HOH . O 6 HOH B 19 719 73 HOH HOH . O 6 HOH B 20 720 461 HOH HOH . O 6 HOH B 21 721 42 HOH HOH . O 6 HOH B 22 722 545 HOH HOH . O 6 HOH B 23 723 271 HOH HOH . O 6 HOH B 24 724 158 HOH HOH . O 6 HOH B 25 725 550 HOH HOH . O 6 HOH B 26 726 490 HOH HOH . O 6 HOH B 27 727 424 HOH HOH . O 6 HOH B 28 728 511 HOH HOH . O 6 HOH B 29 729 59 HOH HOH . O 6 HOH B 30 730 210 HOH HOH . O 6 HOH B 31 731 32 HOH HOH . O 6 HOH B 32 732 505 HOH HOH . O 6 HOH B 33 733 502 HOH HOH . O 6 HOH B 34 734 566 HOH HOH . O 6 HOH B 35 735 40 HOH HOH . O 6 HOH B 36 736 562 HOH HOH . O 6 HOH B 37 737 475 HOH HOH . O 6 HOH B 38 738 164 HOH HOH . O 6 HOH B 39 739 2 HOH HOH . O 6 HOH B 40 740 498 HOH HOH . O 6 HOH B 41 741 366 HOH HOH . O 6 HOH B 42 742 222 HOH HOH . O 6 HOH B 43 743 555 HOH HOH . O 6 HOH B 44 744 556 HOH HOH . O 6 HOH B 45 745 560 HOH HOH . O 6 HOH B 46 746 48 HOH HOH . O 6 HOH B 47 747 525 HOH HOH . O 6 HOH B 48 748 530 HOH HOH . O 6 HOH B 49 749 540 HOH HOH . O 6 HOH B 50 750 312 HOH HOH . O 6 HOH B 51 751 558 HOH HOH . O 6 HOH B 52 752 38 HOH HOH . O 6 HOH B 53 753 516 HOH HOH . O 6 HOH B 54 754 478 HOH HOH . O 6 HOH B 55 755 263 HOH HOH . O 6 HOH B 56 756 471 HOH HOH . O 6 HOH B 57 757 95 HOH HOH . O 6 HOH B 58 758 84 HOH HOH . O 6 HOH B 59 759 534 HOH HOH . O 6 HOH B 60 760 506 HOH HOH . O 6 HOH B 61 761 25 HOH HOH . O 6 HOH B 62 762 39 HOH HOH . O 6 HOH B 63 763 23 HOH HOH . O 6 HOH B 64 764 4 HOH HOH . O 6 HOH B 65 765 557 HOH HOH . O 6 HOH B 66 766 289 HOH HOH . O 6 HOH B 67 767 114 HOH HOH . O 6 HOH B 68 768 549 HOH HOH . O 6 HOH B 69 769 34 HOH HOH . O 6 HOH B 70 770 510 HOH HOH . O 6 HOH B 71 771 192 HOH HOH . O 6 HOH B 72 772 61 HOH HOH . O 6 HOH B 73 773 92 HOH HOH . O 6 HOH B 74 774 27 HOH HOH . O 6 HOH B 75 775 205 HOH HOH . O 6 HOH B 76 776 553 HOH HOH . O 6 HOH B 77 777 151 HOH HOH . O 6 HOH B 78 778 36 HOH HOH . O 6 HOH B 79 779 485 HOH HOH . O 6 HOH B 80 780 37 HOH HOH . O 6 HOH B 81 781 128 HOH HOH . O 6 HOH B 82 782 315 HOH HOH . O 6 HOH B 83 783 293 HOH HOH . O 6 HOH B 84 784 552 HOH HOH . O 6 HOH B 85 785 7 HOH HOH . O 6 HOH B 86 786 522 HOH HOH . O 6 HOH B 87 787 561 HOH HOH . O 6 HOH B 88 788 507 HOH HOH . O 6 HOH B 89 789 324 HOH HOH . O 6 HOH B 90 790 171 HOH HOH . O 6 HOH B 91 791 551 HOH HOH . O 6 HOH B 92 792 519 HOH HOH . O 6 HOH B 93 793 465 HOH HOH . O 6 HOH B 94 794 559 HOH HOH . O 6 HOH B 95 795 563 HOH HOH . O 6 HOH B 96 796 67 HOH HOH . O 6 HOH B 97 797 501 HOH HOH . O 6 HOH B 98 798 547 HOH HOH . O 6 HOH B 99 799 509 HOH HOH . O 6 HOH B 100 800 252 HOH HOH . O 6 HOH B 101 801 546 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 39.261 18.107 57.071 1 50.06 ? C1 GOL 605 A 1 HETATM 2 O O1 GOL . . . G 4 38.18 18.765 56.411 1 45.68 ? O1 GOL 605 A 1 HETATM 3 C C2 GOL . . . G 4 40.612 18.511 56.503 1 51.45 ? C2 GOL 605 A 1 HETATM 4 O O2 GOL . . . G 4 41.34 19.258 57.481 1 52.28 ? O2 GOL 605 A 1 HETATM 5 C C3 GOL . . . G 4 41.483 17.358 56.032 1 53.05 ? C3 GOL 605 A 1 HETATM 6 O O3 GOL . . . G 4 40.777 16.122 55.907 1 52.79 ? O3 GOL 605 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #