data_7LOX # _model_server_result.job_id 0OCHh2Bs8zT974DZz7_Rsg _model_server_result.datetime_utc '2024-10-18 22:26:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lox # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":403}' # _entry.id 7LOX # _exptl.entry_id 7LOX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.07 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GUANIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7LOX _cell.length_a 129.028 _cell.length_b 129.028 _cell.length_c 88.29 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LOX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 58.86 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 J N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 126 A HIS 126 1_555 E MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc2 A OD1 ASP 149 A ASP 149 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc3 A OD2 ASP 149 A ASP 149 1_555 E MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc4 A ND1 HIS 151 A HIS 151 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc5 A OD1 ASP 153 A ASP 153 1_555 E MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc6 A OD2 ASP 230 A ASP 230 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc7 A OD2 ASP 230 A ASP 230 1_555 E MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc8 A OD1 ASP 232 A ASP 232 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc9 A OD2 ASP 232 A ASP 232 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc10 D MN MN . A MN 401 1_555 E MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc11 D MN MN . A MN 401 1_555 F N2 GAI . A GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc12 E MN MN . A MN 402 1_555 F N1 GAI . A GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc13 B ND1 HIS 126 B HIS 126 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc14 B OD1 ASP 149 B ASP 149 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc15 B OD2 ASP 149 B ASP 149 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc16 B ND1 HIS 151 B HIS 151 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc17 B OD2 ASP 153 B ASP 153 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc18 B OD2 ASP 230 B ASP 230 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc19 B OD2 ASP 230 B ASP 230 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc20 B OD1 ASP 232 B ASP 232 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc21 B OD2 ASP 232 B ASP 232 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc22 H MN MN . B MN 401 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? metalc ? metalc23 H MN MN . B MN 401 1_555 J N2 GAI . B GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc24 I MN MN . B MN 402 1_555 J N3 GAI . B GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc25 C ND1 HIS 126 C HIS 126 1_555 L MN MN . C MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc26 C OD1 ASP 149 C ASP 149 1_555 K MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc27 C OD2 ASP 149 C ASP 149 1_555 L MN MN . C MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc28 C ND1 HIS 151 C HIS 151 1_555 K MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc29 C OD2 ASP 153 C ASP 153 1_555 L MN MN . C MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc30 C OD1 ASP 230 C ASP 230 1_555 K MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc31 C OD1 ASP 230 C ASP 230 1_555 L MN MN . C MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc32 C OD1 ASP 232 C ASP 232 1_555 K MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc33 C OD2 ASP 232 C ASP 232 1_555 K MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc34 K MN MN . C MN 401 1_555 M N1 GAI . C GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc35 L MN MN . C MN 402 1_555 M N3 GAI . C GAI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? # _chem_comp.formula 'C H5 N3' _chem_comp.formula_weight 59.07 _chem_comp.id GAI _chem_comp.mon_nstd_flag . _chem_comp.name GUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 GAI doub 83 n n C N2 GAI sing 84 n n C N3 GAI sing 85 n n N1 HN1 GAI sing 86 n n N2 HN21 GAI sing 87 n n N2 HN22 GAI sing 88 n n N3 HN31 GAI sing 89 n n N3 HN32 GAI sing 90 n n # _atom_sites.entry_id 7LOX _atom_sites.fract_transf_matrix[1][1] 0.00775 _atom_sites.fract_transf_matrix[1][2] 0.004475 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011326 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MN A 1 401 401 MN MN . E 2 MN A 1 402 501 MN MN . F 3 GAI A 1 403 601 GAI GAI . G 3 GAI A 1 404 701 GAI GAI . H 2 MN B 1 401 401 MN MN . I 2 MN B 1 402 501 MN MN . J 3 GAI B 1 403 601 GAI GAI . K 2 MN C 1 401 401 MN MN . L 2 MN C 1 402 501 MN MN . M 3 GAI C 1 403 701 GAI GAI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GAI . . . F 3 -64.882 -13.282 26.039 1 63.42 ? C GAI 403 A 1 HETATM 2 N N1 GAI . . . F 3 -65.363 -12.986 24.701 1 64.24 ? N1 GAI 403 A 1 HETATM 3 N N2 GAI . . . F 3 -63.687 -13.058 26.338 1 58.4 ? N2 GAI 403 A 1 HETATM 4 N N3 GAI . . . F 3 -65.787 -13.837 27.03 1 74 ? N3 GAI 403 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #