data_7LP9 # _model_server_result.job_id nRMiJuiPCMuIr9ONdEhn2w _model_server_result.datetime_utc '2024-11-14 06:35:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lp9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PA","auth_seq_id":903}' # _entry.id 7LP9 # _exptl.entry_id 7LP9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LP9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 N N N ? 3 R N N ? 3 U N N ? 3 CA N N ? 3 FA N N ? 3 PA N N ? 3 RA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 643 A GLY 643 1_555 O NA NA . A NA 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc2 O NA NA . A NA 911 1_555 B O GLY 643 B GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc3 O NA NA . A NA 911 1_555 C O GLY 643 C GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc4 O NA NA . A NA 911 1_555 D O GLY 643 D GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id LBN _chem_comp.mon_nstd_flag . _chem_comp.name 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 N1 LBN sing 295 n n O3 P1 LBN sing 296 n n O2 C9 LBN sing 297 n n O2 P1 LBN sing 298 n n C9 C6 LBN sing 299 n n O4 P1 LBN doub 300 n n P1 O1 LBN sing 301 n n C6 N1 LBN sing 302 n n N1 C15 LBN sing 303 n n N1 C18 LBN sing 304 n n O1 C1 LBN sing 305 n n C2 C1 LBN sing 306 n n C2 C3 LBN sing 307 n n C2 O7 LBN sing 308 n n C3 O5 LBN sing 309 n n O6 C25 LBN doub 310 n n O5 C25 LBN sing 311 n n O7 C34 LBN sing 312 n n C25 C26 LBN sing 313 n n C34 C35 LBN sing 314 n n C34 O8 LBN doub 315 n n C26 C27 LBN sing 316 n n C35 C36 LBN sing 317 n n C27 C28 LBN sing 318 n n C36 C37 LBN sing 319 n n C28 C29 LBN sing 320 n n C37 C38 LBN sing 321 n n C29 C30 LBN sing 322 n n C39 C38 LBN sing 323 n n C39 C40 LBN sing 324 n n C41 C40 LBN sing 325 n n C41 C42 LBN sing 326 n n C30 C31 LBN sing 327 n n C42 C5 LBN doub 328 z n C31 C32 LBN sing 329 n n C5 C8 LBN sing 330 n n C8 C11 LBN sing 331 n n C32 C33 LBN sing 332 n n C11 C14 LBN sing 333 n n C33 C4 LBN sing 334 n n C14 C17 LBN sing 335 n n C4 C7 LBN sing 336 n n C17 C20 LBN sing 337 n n C7 C10 LBN sing 338 n n C20 C22 LBN sing 339 n n C10 C13 LBN sing 340 n n C22 C23 LBN sing 341 n n C13 C16 LBN sing 342 n n C23 C24 LBN sing 343 n n C16 C19 LBN sing 344 n n C19 C21 LBN sing 345 n n C1 H1 LBN sing 346 n n C1 H2 LBN sing 347 n n C2 H3 LBN sing 348 n n C3 H4 LBN sing 349 n n C3 H5 LBN sing 350 n n C4 H6 LBN sing 351 n n C4 H7 LBN sing 352 n n C5 H8 LBN sing 353 n n C6 H9 LBN sing 354 n n C6 H10 LBN sing 355 n n C7 H11 LBN sing 356 n n C7 H12 LBN sing 357 n n C8 H13 LBN sing 358 n n C8 H14 LBN sing 359 n n C9 H15 LBN sing 360 n n C9 H16 LBN sing 361 n n C10 H17 LBN sing 362 n n C10 H18 LBN sing 363 n n C11 H19 LBN sing 364 n n C12 H20 LBN sing 365 n n C12 H21 LBN sing 366 n n C12 H22 LBN sing 367 n n C13 H23 LBN sing 368 n n C13 H24 LBN sing 369 n n C14 H25 LBN sing 370 n n C15 H26 LBN sing 371 n n C15 H27 LBN sing 372 n n C15 H28 LBN sing 373 n n C16 H30 LBN sing 374 n n C16 H31 LBN sing 375 n n C17 H32 LBN sing 376 n n C17 H33 LBN sing 377 n n C18 H34 LBN sing 378 n n C18 H35 LBN sing 379 n n C18 H36 LBN sing 380 n n C19 H37 LBN sing 381 n n C19 H38 LBN sing 382 n n C20 H39 LBN sing 383 n n C20 H40 LBN sing 384 n n C21 H41 LBN sing 385 n n C21 H42 LBN sing 386 n n C21 H43 LBN sing 387 n n C22 H44 LBN sing 388 n n C22 H45 LBN sing 389 n n C23 H46 LBN sing 390 n n C23 H47 LBN sing 391 n n C24 H48 LBN sing 392 n n C24 H49 LBN sing 393 n n C24 H50 LBN sing 394 n n C26 H51 LBN sing 395 n n C26 H52 LBN sing 396 n n C27 H53 LBN sing 397 n n C27 H54 LBN sing 398 n n C28 H55 LBN sing 399 n n C28 H56 LBN sing 400 n n C29 H57 LBN sing 401 n n C29 H58 LBN sing 402 n n C30 H59 LBN sing 403 n n C30 H60 LBN sing 404 n n C31 H61 LBN sing 405 n n C31 H62 LBN sing 406 n n C32 H63 LBN sing 407 n n C32 H64 LBN sing 408 n n C33 H65 LBN sing 409 n n C33 H66 LBN sing 410 n n C35 H67 LBN sing 411 n n C35 H68 LBN sing 412 n n C36 H69 LBN sing 413 n n C36 H70 LBN sing 414 n n C37 H71 LBN sing 415 n n C37 H72 LBN sing 416 n n C38 H73 LBN sing 417 n n C38 H74 LBN sing 418 n n C39 H75 LBN sing 419 n n C40 H76 LBN sing 420 n n C41 H77 LBN sing 421 n n C41 H78 LBN sing 422 n n C42 H79 LBN sing 423 n n C11 H80 LBN sing 424 n n C14 H81 LBN sing 425 n n C39 H82 LBN sing 426 n n C40 H83 LBN sing 427 n n # _atom_sites.entry_id 7LP9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 T7X A 1 901 901 T7X T7X . F 3 LBN A 1 902 902 LBN LBN . G 4 6OU A 1 903 903 6OU 6OU . H 4 6OU A 1 904 904 6OU 6OU . I 4 6OU A 1 905 905 6OU 6OU . J 4 6OU A 1 906 906 6OU 6OU . K 4 6OU A 1 907 907 6OU 6OU . L 4 6OU A 1 908 908 6OU 6OU . M 4 6OU A 1 909 909 6OU 6OU . N 3 LBN A 1 910 910 LBN LBN . O 5 NA A 1 911 911 NA NA . P 5 NA A 1 912 912 NA NA . Q 4 6OU B 1 901 901 6OU 6OU . R 3 LBN B 1 902 902 LBN LBN . S 6 YFP B 1 903 903 YFP YFP . T 2 T7X B 1 904 904 T7X T7X . U 3 LBN B 1 905 905 LBN LBN . V 4 6OU B 1 906 906 6OU 6OU . W 4 6OU B 1 907 907 6OU 6OU . X 4 6OU B 1 908 908 6OU 6OU . Y 4 6OU B 1 909 909 6OU 6OU . Z 4 6OU B 1 910 910 6OU 6OU . AA 4 6OU B 1 911 911 6OU 6OU . BA 4 6OU C 1 901 901 6OU 6OU . CA 3 LBN C 1 902 902 LBN LBN . DA 6 YFP C 1 903 903 YFP YFP . EA 2 T7X C 1 904 904 T7X T7X . FA 3 LBN C 1 905 905 LBN LBN . GA 4 6OU C 1 906 906 6OU 6OU . HA 4 6OU C 1 907 907 6OU 6OU . IA 6 YFP C 1 908 908 YFP YFP . JA 4 6OU C 1 909 909 6OU 6OU . KA 4 6OU C 1 910 910 6OU 6OU . LA 4 6OU C 1 911 911 6OU 6OU . MA 4 6OU C 1 912 912 6OU 6OU . NA 4 6OU D 1 901 901 6OU 6OU . OA 4 6OU D 1 902 902 6OU 6OU . PA 3 LBN D 1 903 903 LBN LBN . QA 2 T7X D 1 904 904 T7X T7X . RA 3 LBN D 1 905 905 LBN LBN . SA 4 6OU D 1 906 906 6OU 6OU . TA 4 6OU D 1 907 907 6OU 6OU . UA 6 YFP D 1 908 908 YFP YFP . VA 4 6OU D 1 909 909 6OU 6OU . WA 4 6OU D 1 910 910 6OU 6OU . XA 4 6OU D 1 911 911 6OU 6OU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LBN . . . PA 3 132.171 173.23 100.379 1 93.24 ? C1 LBN 903 D 1 HETATM 2 N N1 LBN . . . PA 3 134.275 166.951 101.394 1 93.24 ? N1 LBN 903 D 1 HETATM 3 P P1 LBN . . . PA 3 131.887 170.756 99.289 1 93.24 ? P1 LBN 903 D 1 HETATM 4 C C2 LBN . . . PA 3 131.139 173.093 101.561 1 93.24 ? C2 LBN 903 D 1 HETATM 5 C C3 LBN . . . PA 3 131.074 174.44 102.335 1 93.24 ? C3 LBN 903 D 1 HETATM 6 C C4 LBN . . . PA 3 131.531 180.226 113.91 1 93.24 ? C4 LBN 903 D 1 HETATM 7 C C5 LBN . . . PA 3 129.44 173.811 111.707 1 93.24 ? C5 LBN 903 D 1 HETATM 8 C C6 LBN . . . PA 3 134.432 168.498 101.316 1 93.24 ? C6 LBN 903 D 1 HETATM 9 O O1 LBN . . . PA 3 131.765 172.431 99.32 1 93.24 ? O1 LBN 903 D 1 HETATM 10 C C8 LBN . . . PA 3 128.995 173.53 113.112 1 93.24 ? C8 LBN 903 D 1 HETATM 11 C C9 LBN . . . PA 3 133.909 169.084 99.961 1 93.24 ? C9 LBN 903 D 1 HETATM 12 O O2 LBN . . . PA 3 133.324 170.276 100.243 1 93.24 ? O2 LBN 903 D 1 HETATM 13 C C11 LBN . . . PA 3 129.429 174.556 114.202 1 93.24 ? C11 LBN 903 D 1 HETATM 14 C C12 LBN . . . PA 3 134.854 166.286 100.151 1 93.24 ? C12 LBN 903 D 1 HETATM 15 O O3 LBN . . . PA 3 132.355 170.339 97.936 1 93.24 -1 O3 LBN 903 D 1 HETATM 16 C C14 LBN . . . PA 3 128.283 175.279 114.944 1 93.24 ? C14 LBN 903 D 1 HETATM 17 C C15 LBN . . . PA 3 132.806 166.571 101.545 1 93.24 ? C15 LBN 903 D 1 HETATM 18 O O4 LBN . . . PA 3 130.8 170.173 100.106 1 93.24 ? O4 LBN 903 D 1 HETATM 19 C C17 LBN . . . PA 3 128.727 176.012 116.234 1 93.24 ? C17 LBN 903 D 1 HETATM 20 C C18 LBN . . . PA 3 135.032 166.421 102.605 1 93.24 ? C18 LBN 903 D 1 HETATM 21 C C25 LBN . . . PA 3 131.828 174.939 104.56 1 93.24 ? C25 LBN 903 D 1 HETATM 22 O O5 LBN . . . PA 3 131.047 174.186 103.735 1 93.24 ? O5 LBN 903 D 1 HETATM 23 C C26 LBN . . . PA 3 131.362 175.003 105.999 1 93.24 ? C26 LBN 903 D 1 HETATM 24 O O6 LBN . . . PA 3 132.818 175.509 104.139 1 93.24 ? O6 LBN 903 D 1 HETATM 25 C C27 LBN . . . PA 3 132.477 174.765 107.032 1 93.24 ? C27 LBN 903 D 1 HETATM 26 C C28 LBN . . . PA 3 132.647 175.886 108.083 1 93.24 ? C28 LBN 903 D 1 HETATM 27 C C29 LBN . . . PA 3 132.642 175.467 109.573 1 93.24 ? C29 LBN 903 D 1 HETATM 28 C C30 LBN . . . PA 3 133.197 176.526 110.553 1 93.24 ? C30 LBN 903 D 1 HETATM 29 C C31 LBN . . . PA 3 132.227 177.052 111.646 1 93.24 ? C31 LBN 903 D 1 HETATM 30 C C32 LBN . . . PA 3 132.57 178.414 112.297 1 93.24 ? C32 LBN 903 D 1 HETATM 31 C C33 LBN . . . PA 3 131.356 179.31 112.669 1 93.24 ? C33 LBN 903 D 1 HETATM 32 C C34 LBN . . . PA 3 128.895 172.147 101.717 1 93.24 ? C34 LBN 903 D 1 HETATM 33 O O7 LBN . . . PA 3 129.815 172.918 101.05 1 93.24 ? O7 LBN 903 D 1 HETATM 34 C C35 LBN . . . PA 3 127.981 172.938 102.643 1 93.24 ? C35 LBN 903 D 1 HETATM 35 O O8 LBN . . . PA 3 128.876 170.947 101.545 1 93.24 ? O8 LBN 903 D 1 HETATM 36 C C36 LBN . . . PA 3 127.446 172.165 103.878 1 93.24 ? C36 LBN 903 D 1 HETATM 37 C C37 LBN . . . PA 3 128.039 172.576 105.252 1 93.24 ? C37 LBN 903 D 1 HETATM 38 C C38 LBN . . . PA 3 127.385 171.939 106.502 1 93.24 ? C38 LBN 903 D 1 HETATM 39 C C39 LBN . . . PA 3 128.339 171.888 107.73 1 93.24 ? C39 LBN 903 D 1 HETATM 40 C C40 LBN . . . PA 3 127.645 171.742 109.101 1 93.24 ? C40 LBN 903 D 1 HETATM 41 C C41 LBN . . . PA 3 128.58 171.79 110.345 1 93.24 ? C41 LBN 903 D 1 HETATM 42 C C42 LBN . . . PA 3 129.269 173.101 110.583 1 93.24 ? C42 LBN 903 D 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 42 #