data_7LPB # _model_server_result.job_id oQ0j4csarAoXeUJWZaSw4g _model_server_result.datetime_utc '2024-11-04 22:32:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lpb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1400}' # _entry.id 7LPB # _exptl.entry_id 7LPB _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 717.996 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LPB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LPB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 J N N ? 3 M N N ? 3 N N N ? 3 Q N N ? 3 T N N ? 3 U N N ? 3 X N N ? 3 AA N N ? 3 BA N N ? 3 EA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 386 A CYS 386 1_555 A SG CYS 390 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 B SG CYS 386 B CYS 386 1_555 B SG CYS 390 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 C SG CYS 386 C CYS 386 1_555 C SG CYS 390 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 D SG CYS 386 D CYS 386 1_555 D SG CYS 390 D CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C39 H76 N O8 P' _chem_comp.formula_weight 717.996 _chem_comp.id 6OU _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7LPB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 LBN A 1 1000 1000 LBN LBN . F 3 6OU A 1 1300 1300 6OU 6OU . G 3 6OU A 1 1400 1400 6OU 6OU . H 2 LBN A 1 1500 1500 LBN LBN . I 4 YFP A 1 1600 1600 YFP YFP . J 3 6OU A 1 1900 1900 6OU 6OU . K 5 4DY A 1 3000 3000 4DY 4DY . L 2 LBN B 1 1000 1000 LBN LBN . M 3 6OU B 1 1300 1300 6OU 6OU . N 3 6OU B 1 1400 1400 6OU 6OU . O 2 LBN B 1 1500 1500 LBN LBN . P 4 YFP B 1 1600 1600 YFP YFP . Q 3 6OU B 1 1900 1900 6OU 6OU . R 5 4DY B 1 3000 3000 4DY 4DY . S 2 LBN C 1 1000 1000 LBN LBN . T 3 6OU C 1 1300 1300 6OU 6OU . U 3 6OU C 1 1400 1400 6OU 6OU . V 2 LBN C 1 1500 1500 LBN LBN . W 4 YFP C 1 1600 1600 YFP YFP . X 3 6OU C 1 1900 1900 6OU 6OU . Y 5 4DY C 1 3000 3000 4DY 4DY . Z 2 LBN D 1 1000 1000 LBN LBN . AA 3 6OU D 1 1300 1300 6OU 6OU . BA 3 6OU D 1 1400 1400 6OU 6OU . CA 2 LBN D 1 1500 1500 LBN LBN . DA 4 YFP D 1 1600 1600 YFP YFP . EA 3 6OU D 1 1900 1900 6OU 6OU . FA 5 4DY D 1 3000 3000 4DY 4DY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 6OU . . . G 3 149.279 111.018 120.396 1 43.47 ? C10 6OU 1400 A 1 HETATM 2 C C11 6OU . . . G 3 148.189 109.971 120.005 1 43.47 ? C11 6OU 1400 A 1 HETATM 3 C C12 6OU . . . G 3 147.682 110.024 118.53 1 43.47 ? C12 6OU 1400 A 1 HETATM 4 C C13 6OU . . . G 3 148.016 108.811 117.617 1 43.47 ? C13 6OU 1400 A 1 HETATM 5 C C14 6OU . . . G 3 147.655 108.988 116.103 1 43.47 ? C14 6OU 1400 A 1 HETATM 6 C C15 6OU . . . G 3 148.848 108.853 115.11 1 43.47 ? C15 6OU 1400 A 1 HETATM 7 C C16 6OU . . . G 3 148.563 109.442 113.707 1 43.47 ? C16 6OU 1400 A 1 HETATM 8 O O17 6OU . . . G 3 147.599 109.164 113.06 1 43.47 ? O17 6OU 1400 A 1 HETATM 9 O O18 6OU . . . G 3 149.509 110.332 113.23 1 43.47 ? O18 6OU 1400 A 1 HETATM 10 C C19 6OU . . . G 3 149.198 111.73 113.373 1 43.47 ? C19 6OU 1400 A 1 HETATM 11 C C20 6OU . . . G 3 150.463 112.651 113.284 1 43.47 ? C20 6OU 1400 A 1 HETATM 12 C C21 6OU . . . G 3 151.354 112.326 112.022 1 43.47 ? C21 6OU 1400 A 1 HETATM 13 O O22 6OU . . . G 3 150.603 112.382 110.862 1 43.47 ? O22 6OU 1400 A 1 HETATM 14 P P23 6OU . . . G 3 150.702 111.058 109.698 1 43.47 ? P23 6OU 1400 A 1 HETATM 15 O O24 6OU . . . G 3 150.641 109.803 110.485 1 43.47 ? O24 6OU 1400 A 1 HETATM 16 O O25 6OU . . . G 3 149.751 111.406 108.602 1 43.47 -1 O25 6OU 1400 A 1 HETATM 17 O O26 6OU . . . G 3 152.29 111.153 109.021 1 43.47 ? O26 6OU 1400 A 1 HETATM 18 O O30 6OU . . . G 3 151.241 112.468 114.496 1 43.47 ? O30 6OU 1400 A 1 HETATM 19 C C31 6OU . . . G 3 151.042 113.353 115.55 1 43.47 ? C31 6OU 1400 A 1 HETATM 20 O O32 6OU . . . G 3 150.269 114.251 115.463 1 43.47 ? O32 6OU 1400 A 1 HETATM 21 C C33 6OU . . . G 3 151.878 113.109 116.839 1 43.47 ? C33 6OU 1400 A 1 HETATM 22 C C34 6OU . . . G 3 151.066 113.348 118.159 1 43.47 ? C34 6OU 1400 A 1 HETATM 23 C C35 6OU . . . G 3 151.875 113.852 119.403 1 43.47 ? C35 6OU 1400 A 1 HETATM 24 C C36 6OU . . . G 3 151.024 114.235 120.661 1 43.47 ? C36 6OU 1400 A 1 HETATM 25 C C37 6OU . . . G 3 151.722 114.116 122.048 1 43.47 ? C37 6OU 1400 A 1 HETATM 26 C C38 6OU . . . G 3 151.191 115.053 123.174 1 43.47 ? C38 6OU 1400 A 1 HETATM 27 C C39 6OU . . . G 3 150.091 114.449 124.064 1 43.47 ? C39 6OU 1400 A 1 HETATM 28 C C40 6OU . . . G 3 149.54 115.363 125.128 1 43.47 ? C40 6OU 1400 A 1 HETATM 29 C C41 6OU . . . G 3 148.243 115.668 125.298 1 43.47 ? C41 6OU 1400 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #