data_7LPC # _model_server_result.job_id FlF8j2n-3mA9SSjpFrdr-g _model_server_result.datetime_utc '2024-11-04 22:37:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lpc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":906}' # _entry.id 7LPC # _exptl.entry_id 7LPC _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 717.996 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LPC _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LPC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 NA N N ? 2 OA N N ? 2 PA N N ? 2 QA N N ? 2 RA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 386 C CYS 386 1_555 A SG CYS 390 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 B SG CYS 386 A CYS 386 1_555 B SG CYS 390 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 C SG CYS 386 B CYS 386 1_555 C SG CYS 390 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 D SG CYS 386 D CYS 386 1_555 D SG CYS 390 D CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? # _chem_comp.formula 'C39 H76 N O8 P' _chem_comp.formula_weight 717.996 _chem_comp.id 6OU _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C48 C47 6OU sing 1 n n C48 C49 6OU sing 2 n n C47 C46 6OU sing 3 n n C41 C40 6OU doub 4 z n C41 C42 6OU sing 5 n n C40 C39 6OU sing 6 n n C27 C28 6OU sing 7 n n C27 O26 6OU sing 8 n n C28 N29 6OU sing 9 n n C01 C02 6OU sing 10 n n C42 C43 6OU sing 11 n n C02 C03 6OU sing 12 n n C45 C46 6OU sing 13 n n C45 C44 6OU sing 14 n n C39 C38 6OU sing 15 n n C33 C34 6OU sing 16 n n C33 C31 6OU sing 17 n n C44 C43 6OU sing 18 n n O26 P23 6OU sing 19 n n O24 P23 6OU doub 20 n n C35 C34 6OU sing 21 n n C35 C36 6OU sing 22 n n C38 C37 6OU sing 23 n n C36 C37 6OU sing 24 n n C31 O30 6OU sing 25 n n C31 O32 6OU doub 26 n n O22 P23 6OU sing 27 n n O22 C21 6OU sing 28 n n O30 C20 6OU sing 29 n n P23 O25 6OU sing 30 n n C03 C04 6OU sing 31 n n C04 C05 6OU sing 32 n n C19 C20 6OU sing 33 n n C19 O18 6OU sing 34 n n C21 C20 6OU sing 35 n n C15 C14 6OU sing 36 n n C15 C16 6OU sing 37 n n O18 C16 6OU sing 38 n n C14 C13 6OU sing 39 n n C05 C06 6OU sing 40 n n C16 O17 6OU doub 41 n n C06 C07 6OU sing 42 n n C11 C10 6OU sing 43 n n C11 C12 6OU sing 44 n n C13 C12 6OU sing 45 n n C10 C09 6OU sing 46 n n C07 C08 6OU sing 47 n n C09 C08 6OU sing 48 n n C01 H1 6OU sing 49 n n C01 H2 6OU sing 50 n n C01 H3 6OU sing 51 n n C02 H4 6OU sing 52 n n C02 H5 6OU sing 53 n n C03 H6 6OU sing 54 n n C03 H7 6OU sing 55 n n C04 H8 6OU sing 56 n n C04 H9 6OU sing 57 n n C05 H10 6OU sing 58 n n C05 H11 6OU sing 59 n n C06 H12 6OU sing 60 n n C06 H13 6OU sing 61 n n C07 H14 6OU sing 62 n n C07 H15 6OU sing 63 n n C08 H16 6OU sing 64 n n C08 H17 6OU sing 65 n n C09 H18 6OU sing 66 n n C09 H19 6OU sing 67 n n C10 H20 6OU sing 68 n n C10 H21 6OU sing 69 n n C11 H22 6OU sing 70 n n C11 H23 6OU sing 71 n n C12 H24 6OU sing 72 n n C12 H25 6OU sing 73 n n C13 H26 6OU sing 74 n n C13 H27 6OU sing 75 n n C14 H28 6OU sing 76 n n C14 H29 6OU sing 77 n n C15 H30 6OU sing 78 n n C15 H31 6OU sing 79 n n C19 H32 6OU sing 80 n n C19 H33 6OU sing 81 n n C20 H34 6OU sing 82 n n C21 H35 6OU sing 83 n n C21 H36 6OU sing 84 n n O25 H37 6OU sing 85 n n C27 H38 6OU sing 86 n n C27 H39 6OU sing 87 n n C28 H40 6OU sing 88 n n C28 H41 6OU sing 89 n n N29 H42 6OU sing 90 n n N29 H43 6OU sing 91 n n C33 H45 6OU sing 92 n n C33 H46 6OU sing 93 n n C34 H47 6OU sing 94 n n C34 H48 6OU sing 95 n n C35 H49 6OU sing 96 n n C35 H50 6OU sing 97 n n C36 H51 6OU sing 98 n n C36 H52 6OU sing 99 n n C37 H53 6OU sing 100 n n C37 H54 6OU sing 101 n n C38 H55 6OU sing 102 n n C38 H56 6OU sing 103 n n C39 H57 6OU sing 104 n n C39 H58 6OU sing 105 n n C40 H59 6OU sing 106 n n C41 H60 6OU sing 107 n n C42 H61 6OU sing 108 n n C42 H62 6OU sing 109 n n C43 H63 6OU sing 110 n n C43 H64 6OU sing 111 n n C44 H65 6OU sing 112 n n C44 H66 6OU sing 113 n n C45 H67 6OU sing 114 n n C45 H68 6OU sing 115 n n C46 H69 6OU sing 116 n n C46 H70 6OU sing 117 n n C47 H71 6OU sing 118 n n C47 H72 6OU sing 119 n n C48 H73 6OU sing 120 n n C48 H74 6OU sing 121 n n C49 H75 6OU sing 122 n n C49 H76 6OU sing 123 n n C49 H77 6OU sing 124 n n # _atom_sites.entry_id 7LPC _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 6OU C 1 901 901 6OU 6OU . F 3 LBN C 1 902 902 LBN LBN . G 4 YFP C 1 903 903 YFP YFP . H 5 T7X C 1 904 904 T7X T7X . I 3 LBN C 1 905 905 LBN LBN . J 2 6OU C 1 906 906 6OU 6OU . K 2 6OU C 1 907 907 6OU 6OU . L 2 6OU C 1 908 908 6OU 6OU . M 2 6OU C 1 909 909 6OU 6OU . N 2 6OU C 1 910 910 6OU 6OU . O 2 6OU A 1 901 901 6OU 6OU . P 3 LBN A 1 902 902 LBN LBN . Q 4 YFP A 1 903 903 YFP YFP . R 5 T7X A 1 904 904 T7X T7X . S 3 LBN A 1 905 905 LBN LBN . T 2 6OU A 1 906 906 6OU 6OU . U 2 6OU A 1 907 907 6OU 6OU . V 2 6OU A 1 908 908 6OU 6OU . W 2 6OU A 1 909 909 6OU 6OU . X 2 6OU A 1 910 910 6OU 6OU . Y 2 6OU B 1 901 901 6OU 6OU . Z 3 LBN B 1 902 902 LBN LBN . AA 4 YFP B 1 903 903 YFP YFP . BA 5 T7X B 1 904 904 T7X T7X . CA 3 LBN B 1 905 905 LBN LBN . DA 2 6OU B 1 906 906 6OU 6OU . EA 2 6OU B 1 907 907 6OU 6OU . FA 2 6OU B 1 908 908 6OU 6OU . GA 2 6OU B 1 909 909 6OU 6OU . HA 2 6OU B 1 910 910 6OU 6OU . IA 2 6OU D 1 901 901 6OU 6OU . JA 3 LBN D 1 902 902 LBN LBN . KA 4 YFP D 1 903 903 YFP YFP . LA 5 T7X D 1 904 904 T7X T7X . MA 3 LBN D 1 905 905 LBN LBN . NA 2 6OU D 1 906 906 6OU 6OU . OA 2 6OU D 1 907 907 6OU 6OU . PA 2 6OU D 1 908 908 6OU 6OU . QA 2 6OU D 1 909 909 6OU 6OU . RA 2 6OU D 1 910 910 6OU 6OU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C06 6OU . . . T 2 154.182 124.596 121.746 1 18.85 ? C06 6OU 906 A 1 HETATM 2 C C07 6OU . . . T 2 153.285 124.119 120.554 1 18.85 ? C07 6OU 906 A 1 HETATM 3 C C08 6OU . . . T 2 153.626 122.74 119.916 1 18.85 ? C08 6OU 906 A 1 HETATM 4 C C09 6OU . . . T 2 152.566 122.155 118.922 1 18.85 ? C09 6OU 906 A 1 HETATM 5 C C10 6OU . . . T 2 153.106 121.175 117.841 1 18.85 ? C10 6OU 906 A 1 HETATM 6 C C11 6OU . . . T 2 152.463 121.25 116.42 1 18.85 ? C11 6OU 906 A 1 HETATM 7 C C12 6OU . . . T 2 153.219 120.494 115.281 1 18.85 ? C12 6OU 906 A 1 HETATM 8 C C13 6OU . . . T 2 153.355 121.217 113.911 1 18.85 ? C13 6OU 906 A 1 HETATM 9 C C14 6OU . . . T 2 153.522 120.279 112.664 1 18.85 ? C14 6OU 906 A 1 HETATM 10 C C15 6OU . . . T 2 153.044 120.876 111.305 1 18.85 ? C15 6OU 906 A 1 HETATM 11 C C16 6OU . . . T 2 153.589 120.124 110.066 1 18.85 ? C16 6OU 906 A 1 HETATM 12 O O17 6OU . . . T 2 154.679 120.302 109.614 1 18.85 ? O17 6OU 906 A 1 HETATM 13 O O18 6OU . . . T 2 152.722 119.208 109.494 1 18.85 ? O18 6OU 906 A 1 HETATM 14 C C19 6OU . . . T 2 151.772 118.589 110.382 1 18.85 ? C19 6OU 906 A 1 HETATM 15 C C20 6OU . . . T 2 151.48 117.091 110.02 1 18.85 ? C20 6OU 906 A 1 HETATM 16 C C21 6OU . . . T 2 151.051 116.91 108.511 1 18.85 ? C21 6OU 906 A 1 HETATM 17 O O22 6OU . . . T 2 151.12 118.112 107.83 1 18.85 ? O22 6OU 906 A 1 HETATM 18 P P23 6OU . . . T 2 150.102 118.367 106.41 1 18.85 ? P23 6OU 906 A 1 HETATM 19 O O24 6OU . . . T 2 148.773 117.799 106.741 1 18.85 ? O24 6OU 906 A 1 HETATM 20 O O25 6OU . . . T 2 150.327 119.782 105.992 1 18.85 -1 O25 6OU 906 A 1 HETATM 21 O O26 6OU . . . T 2 150.781 117.373 105.168 1 18.85 ? O26 6OU 906 A 1 HETATM 22 O O30 6OU . . . T 2 150.423 116.614 110.892 1 18.85 ? O30 6OU 906 A 1 HETATM 23 C C31 6OU . . . T 2 150.775 116.07 112.123 1 18.85 ? C31 6OU 906 A 1 HETATM 24 O O32 6OU . . . T 2 151.891 116.131 112.526 1 18.85 ? O32 6OU 906 A 1 HETATM 25 C C33 6OU . . . T 2 149.639 115.384 112.937 1 18.85 ? C33 6OU 906 A 1 HETATM 26 C C34 6OU . . . T 2 148.625 116.403 113.566 1 18.85 ? C34 6OU 906 A 1 HETATM 27 C C35 6OU . . . T 2 149.125 117.229 114.8 1 18.85 ? C35 6OU 906 A 1 HETATM 28 C C36 6OU . . . T 2 148.063 118.171 115.464 1 18.85 ? C36 6OU 906 A 1 HETATM 29 C C37 6OU . . . T 2 148.271 119.706 115.294 1 18.85 ? C37 6OU 906 A 1 HETATM 30 C C38 6OU . . . T 2 147.88 120.596 116.511 1 18.85 ? C38 6OU 906 A 1 HETATM 31 C C39 6OU . . . T 2 147.444 122.03 116.161 1 18.85 ? C39 6OU 906 A 1 HETATM 32 C C40 6OU . . . T 2 146.824 122.813 117.291 1 18.85 ? C40 6OU 906 A 1 HETATM 33 C C41 6OU . . . T 2 147.328 122.923 118.531 1 18.85 ? C41 6OU 906 A 1 HETATM 34 C C42 6OU . . . T 2 146.694 123.71 119.648 1 18.85 ? C42 6OU 906 A 1 HETATM 35 C C43 6OU . . . T 2 147.618 124.196 120.804 1 18.85 ? C43 6OU 906 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 518 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #