data_7LPD
#
_model_server_result.job_id            bz7tzMHt3cvCrKGbAStI1Q 
_model_server_result.datetime_utc      '2024-11-04 22:56:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lpd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":906}' 
#
_entry.id    7LPD 
#
_exptl.entry_id    7LPD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 J N N 
? 2 L N N 
? 2 Q N N 
? 2 R N N 
? 2 W N N 
? 2 X N N 
? 2 BA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 386 A CYS 386 1_555 A SG CYS 390 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 B SG CYS 386 B CYS 386 1_555 B SG CYS 390 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 C SG CYS 386 C CYS 386 1_555 C SG CYS 390 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf4 D SG CYS 386 D CYS 386 1_555 D SG CYS 390 D CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                LBN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' 
#
_atom_sites.entry_id                     7LPD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 LBN A 1 901 901 LBN LBN . 
F 3 6OU A 1 902 902 6OU 6OU . 
G 3 6OU A 1 903 903 6OU 6OU . 
H 4 4DY A 1 904 904 4DY 4DY . 
I 3 6OU A 1 905 905 6OU 6OU . 
J 2 LBN A 1 906 906 LBN LBN . 
K 3 6OU A 1 907 903 6OU 6OU . 
L 2 LBN B 1 901 901 LBN LBN . 
M 3 6OU B 1 902 902 6OU 6OU . 
N 3 6OU B 1 903 903 6OU 6OU . 
O 4 4DY B 1 904 904 4DY 4DY . 
P 3 6OU B 1 905 905 6OU 6OU . 
Q 2 LBN B 1 906 906 LBN LBN . 
R 2 LBN C 1 901 901 LBN LBN . 
S 3 6OU C 1 902 902 6OU 6OU . 
T 3 6OU C 1 903 903 6OU 6OU . 
U 4 4DY C 1 904 904 4DY 4DY . 
V 3 6OU C 1 905 905 6OU 6OU . 
W 2 LBN C 1 906 906 LBN LBN . 
X 2 LBN D 1 901 901 LBN LBN . 
Y 3 6OU D 1 902 902 6OU 6OU . 
Z 4 4DY D 1 903 904 4DY 4DY . 
AA 3 6OU D 1 904 905 6OU 6OU . 
BA 2 LBN D 1 905 906 LBN LBN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LBN . . . J 2 163.181 159.135 170.183 1 51.64 ? C1 LBN 906 A 1 
HETATM 2 C C2 LBN . . . J 2 163.734 158.354 168.945 1 51.64 ? C2 LBN 906 A 1 
HETATM 3 C C3 LBN . . . J 2 164.471 159.365 168.014 1 51.64 ? C3 LBN 906 A 1 
HETATM 4 O O1 LBN . . . J 2 162.044 158.496 170.625 1 51.64 ? O1 LBN 906 A 1 
HETATM 5 C C25 LBN . . . J 2 163.999 159.865 165.707 1 51.64 ? C25 LBN 906 A 1 
HETATM 6 O O5 LBN . . . J 2 164.362 158.953 166.656 1 51.64 ? O5 LBN 906 A 1 
HETATM 7 C C26 LBN . . . J 2 164.714 159.716 164.38 1 51.64 ? C26 LBN 906 A 1 
HETATM 8 O O6 LBN . . . J 2 163.166 160.721 165.946 1 51.64 ? O6 LBN 906 A 1 
HETATM 9 C C27 LBN . . . J 2 163.822 159.92 163.152 1 51.64 ? C27 LBN 906 A 1 
HETATM 10 C C28 LBN . . . J 2 164.049 161.255 162.407 1 51.64 ? C28 LBN 906 A 1 
HETATM 11 C C29 LBN . . . J 2 164.369 161.183 160.893 1 51.64 ? C29 LBN 906 A 1 
HETATM 12 C C30 LBN . . . J 2 164.162 162.501 160.113 1 51.64 ? C30 LBN 906 A 1 
HETATM 13 C C31 LBN . . . J 2 165.395 163.087 159.373 1 51.64 ? C31 LBN 906 A 1 
HETATM 14 C C34 LBN . . . J 2 164.497 156.484 170.27 1 51.64 ? C34 LBN 906 A 1 
HETATM 15 O O7 LBN . . . J 2 164.75 157.468 169.367 1 51.64 ? O7 LBN 906 A 1 
HETATM 16 C C35 LBN . . . J 2 165.202 155.173 169.951 1 51.64 ? C35 LBN 906 A 1 
HETATM 17 O O8 LBN . . . J 2 163.768 156.706 171.211 1 51.64 ? O8 LBN 906 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           17 
#