data_7LRK # _model_server_result.job_id pHXhKIOe5YDQAPls-DPlnQ _model_server_result.datetime_utc '2025-01-10 15:36:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lrk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":3106}' # _entry.id 7LRK # _exptl.entry_id 7LRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.67 _cell.angle_gamma 90 _cell.entry_id 7LRK _cell.length_a 58.31 _cell.length_b 27.07 _cell.length_c 76.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7LRK _atom_sites.fract_transf_matrix[1][1] 0.01715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001099 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 YC4 A 1 3101 1 YC4 P93 . D 3 EDO A 1 3102 1 EDO EDO . E 3 EDO A 1 3103 4 EDO EDO . F 3 EDO A 1 3104 5 EDO EDO . G 3 EDO A 1 3105 6 EDO EDO . H 3 EDO A 1 3106 9 EDO EDO . I 3 EDO A 1 3107 13 EDO EDO . J 2 YC4 B 1 3101 2 YC4 P93 . K 3 EDO B 1 3102 2 EDO EDO . L 3 EDO B 1 3103 3 EDO EDO . M 3 EDO B 1 3104 7 EDO EDO . N 3 EDO B 1 3105 8 EDO EDO . O 3 EDO B 1 3106 10 EDO EDO . P 3 EDO B 1 3107 12 EDO EDO . Q 4 HOH A 1 3201 247 HOH HOH . Q 4 HOH A 2 3202 275 HOH HOH . Q 4 HOH A 3 3203 130 HOH HOH . Q 4 HOH A 4 3204 138 HOH HOH . Q 4 HOH A 5 3205 254 HOH HOH . Q 4 HOH A 6 3206 276 HOH HOH . Q 4 HOH A 7 3207 112 HOH HOH . Q 4 HOH A 8 3208 189 HOH HOH . Q 4 HOH A 9 3209 10 HOH HOH . Q 4 HOH A 10 3210 98 HOH HOH . Q 4 HOH A 11 3211 267 HOH HOH . Q 4 HOH A 12 3212 264 HOH HOH . Q 4 HOH A 13 3213 92 HOH HOH . Q 4 HOH A 14 3214 141 HOH HOH . Q 4 HOH A 15 3215 104 HOH HOH . Q 4 HOH A 16 3216 249 HOH HOH . Q 4 HOH A 17 3217 1 HOH HOH . Q 4 HOH A 18 3218 175 HOH HOH . Q 4 HOH A 19 3219 68 HOH HOH . Q 4 HOH A 20 3220 49 HOH HOH . Q 4 HOH A 21 3221 111 HOH HOH . Q 4 HOH A 22 3222 57 HOH HOH . Q 4 HOH A 23 3223 204 HOH HOH . Q 4 HOH A 24 3224 84 HOH HOH . Q 4 HOH A 25 3225 15 HOH HOH . Q 4 HOH A 26 3226 3 HOH HOH . Q 4 HOH A 27 3227 67 HOH HOH . Q 4 HOH A 28 3228 136 HOH HOH . Q 4 HOH A 29 3229 231 HOH HOH . Q 4 HOH A 30 3230 58 HOH HOH . Q 4 HOH A 31 3231 201 HOH HOH . Q 4 HOH A 32 3232 229 HOH HOH . Q 4 HOH A 33 3233 234 HOH HOH . Q 4 HOH A 34 3234 14 HOH HOH . Q 4 HOH A 35 3235 284 HOH HOH . Q 4 HOH A 36 3236 8 HOH HOH . Q 4 HOH A 37 3237 7 HOH HOH . Q 4 HOH A 38 3238 54 HOH HOH . Q 4 HOH A 39 3239 114 HOH HOH . Q 4 HOH A 40 3240 242 HOH HOH . Q 4 HOH A 41 3241 246 HOH HOH . Q 4 HOH A 42 3242 23 HOH HOH . Q 4 HOH A 43 3243 245 HOH HOH . Q 4 HOH A 44 3244 202 HOH HOH . Q 4 HOH A 45 3245 188 HOH HOH . Q 4 HOH A 46 3246 24 HOH HOH . Q 4 HOH A 47 3247 269 HOH HOH . Q 4 HOH A 48 3248 13 HOH HOH . Q 4 HOH A 49 3249 163 HOH HOH . Q 4 HOH A 50 3250 48 HOH HOH . Q 4 HOH A 51 3251 43 HOH HOH . Q 4 HOH A 52 3252 70 HOH HOH . Q 4 HOH A 53 3253 25 HOH HOH . Q 4 HOH A 54 3254 75 HOH HOH . Q 4 HOH A 55 3255 125 HOH HOH . Q 4 HOH A 56 3256 40 HOH HOH . Q 4 HOH A 57 3257 182 HOH HOH . Q 4 HOH A 58 3258 101 HOH HOH . Q 4 HOH A 59 3259 6 HOH HOH . Q 4 HOH A 60 3260 87 HOH HOH . Q 4 HOH A 61 3261 66 HOH HOH . Q 4 HOH A 62 3262 93 HOH HOH . Q 4 HOH A 63 3263 177 HOH HOH . Q 4 HOH A 64 3264 83 HOH HOH . Q 4 HOH A 65 3265 5 HOH HOH . Q 4 HOH A 66 3266 62 HOH HOH . Q 4 HOH A 67 3267 30 HOH HOH . Q 4 HOH A 68 3268 208 HOH HOH . Q 4 HOH A 69 3269 47 HOH HOH . Q 4 HOH A 70 3270 56 HOH HOH . Q 4 HOH A 71 3271 220 HOH HOH . Q 4 HOH A 72 3272 214 HOH HOH . Q 4 HOH A 73 3273 45 HOH HOH . Q 4 HOH A 74 3274 127 HOH HOH . Q 4 HOH A 75 3275 120 HOH HOH . Q 4 HOH A 76 3276 118 HOH HOH . Q 4 HOH A 77 3277 18 HOH HOH . Q 4 HOH A 78 3278 137 HOH HOH . Q 4 HOH A 79 3279 89 HOH HOH . Q 4 HOH A 80 3280 44 HOH HOH . Q 4 HOH A 81 3281 237 HOH HOH . Q 4 HOH A 82 3282 145 HOH HOH . Q 4 HOH A 83 3283 97 HOH HOH . Q 4 HOH A 84 3284 147 HOH HOH . Q 4 HOH A 85 3285 281 HOH HOH . Q 4 HOH A 86 3286 265 HOH HOH . Q 4 HOH A 87 3287 27 HOH HOH . Q 4 HOH A 88 3288 59 HOH HOH . Q 4 HOH A 89 3289 81 HOH HOH . Q 4 HOH A 90 3290 34 HOH HOH . Q 4 HOH A 91 3291 212 HOH HOH . Q 4 HOH A 92 3292 172 HOH HOH . Q 4 HOH A 93 3293 165 HOH HOH . Q 4 HOH A 94 3294 259 HOH HOH . Q 4 HOH A 95 3295 263 HOH HOH . Q 4 HOH A 96 3296 268 HOH HOH . Q 4 HOH A 97 3297 287 HOH HOH . Q 4 HOH A 98 3298 207 HOH HOH . Q 4 HOH A 99 3299 291 HOH HOH . Q 4 HOH A 100 3300 162 HOH HOH . Q 4 HOH A 101 3301 46 HOH HOH . Q 4 HOH A 102 3302 73 HOH HOH . Q 4 HOH A 103 3303 76 HOH HOH . Q 4 HOH A 104 3304 96 HOH HOH . Q 4 HOH A 105 3305 228 HOH HOH . Q 4 HOH A 106 3306 273 HOH HOH . Q 4 HOH A 107 3307 290 HOH HOH . Q 4 HOH A 108 3308 278 HOH HOH . Q 4 HOH A 109 3309 80 HOH HOH . Q 4 HOH A 110 3310 250 HOH HOH . Q 4 HOH A 111 3311 183 HOH HOH . Q 4 HOH A 112 3312 218 HOH HOH . Q 4 HOH A 113 3313 126 HOH HOH . Q 4 HOH A 114 3314 185 HOH HOH . Q 4 HOH A 115 3315 266 HOH HOH . Q 4 HOH A 116 3316 260 HOH HOH . Q 4 HOH A 117 3317 209 HOH HOH . Q 4 HOH A 118 3318 280 HOH HOH . Q 4 HOH A 119 3319 179 HOH HOH . Q 4 HOH A 120 3320 230 HOH HOH . Q 4 HOH A 121 3321 174 HOH HOH . Q 4 HOH A 122 3322 150 HOH HOH . Q 4 HOH A 123 3323 213 HOH HOH . Q 4 HOH A 124 3324 196 HOH HOH . Q 4 HOH A 125 3325 155 HOH HOH . Q 4 HOH A 126 3326 210 HOH HOH . Q 4 HOH A 127 3327 233 HOH HOH . Q 4 HOH A 128 3328 116 HOH HOH . Q 4 HOH A 129 3329 169 HOH HOH . Q 4 HOH A 130 3330 108 HOH HOH . Q 4 HOH A 131 3331 171 HOH HOH . Q 4 HOH A 132 3332 261 HOH HOH . Q 4 HOH A 133 3333 197 HOH HOH . Q 4 HOH A 134 3334 91 HOH HOH . Q 4 HOH A 135 3335 173 HOH HOH . Q 4 HOH A 136 3336 144 HOH HOH . Q 4 HOH A 137 3337 286 HOH HOH . Q 4 HOH A 138 3338 164 HOH HOH . R 4 HOH B 1 3201 240 HOH HOH . R 4 HOH B 2 3202 157 HOH HOH . R 4 HOH B 3 3203 255 HOH HOH . R 4 HOH B 4 3204 243 HOH HOH . R 4 HOH B 5 3205 122 HOH HOH . R 4 HOH B 6 3206 225 HOH HOH . R 4 HOH B 7 3207 167 HOH HOH . R 4 HOH B 8 3208 139 HOH HOH . R 4 HOH B 9 3209 31 HOH HOH . R 4 HOH B 10 3210 115 HOH HOH . R 4 HOH B 11 3211 221 HOH HOH . R 4 HOH B 12 3212 110 HOH HOH . R 4 HOH B 13 3213 121 HOH HOH . R 4 HOH B 14 3214 219 HOH HOH . R 4 HOH B 15 3215 181 HOH HOH . R 4 HOH B 16 3216 206 HOH HOH . R 4 HOH B 17 3217 124 HOH HOH . R 4 HOH B 18 3218 119 HOH HOH . R 4 HOH B 19 3219 161 HOH HOH . R 4 HOH B 20 3220 39 HOH HOH . R 4 HOH B 21 3221 9 HOH HOH . R 4 HOH B 22 3222 211 HOH HOH . R 4 HOH B 23 3223 199 HOH HOH . R 4 HOH B 24 3224 176 HOH HOH . R 4 HOH B 25 3225 19 HOH HOH . R 4 HOH B 26 3226 103 HOH HOH . R 4 HOH B 27 3227 253 HOH HOH . R 4 HOH B 28 3228 64 HOH HOH . R 4 HOH B 29 3229 226 HOH HOH . R 4 HOH B 30 3230 17 HOH HOH . R 4 HOH B 31 3231 16 HOH HOH . R 4 HOH B 32 3232 2 HOH HOH . R 4 HOH B 33 3233 279 HOH HOH . R 4 HOH B 34 3234 131 HOH HOH . R 4 HOH B 35 3235 69 HOH HOH . R 4 HOH B 36 3236 82 HOH HOH . R 4 HOH B 37 3237 186 HOH HOH . R 4 HOH B 38 3238 63 HOH HOH . R 4 HOH B 39 3239 106 HOH HOH . R 4 HOH B 40 3240 35 HOH HOH . R 4 HOH B 41 3241 148 HOH HOH . R 4 HOH B 42 3242 60 HOH HOH . R 4 HOH B 43 3243 42 HOH HOH . R 4 HOH B 44 3244 223 HOH HOH . R 4 HOH B 45 3245 11 HOH HOH . R 4 HOH B 46 3246 244 HOH HOH . R 4 HOH B 47 3247 38 HOH HOH . R 4 HOH B 48 3248 85 HOH HOH . R 4 HOH B 49 3249 51 HOH HOH . R 4 HOH B 50 3250 12 HOH HOH . R 4 HOH B 51 3251 100 HOH HOH . R 4 HOH B 52 3252 4 HOH HOH . R 4 HOH B 53 3253 26 HOH HOH . R 4 HOH B 54 3254 78 HOH HOH . R 4 HOH B 55 3255 109 HOH HOH . R 4 HOH B 56 3256 28 HOH HOH . R 4 HOH B 57 3257 105 HOH HOH . R 4 HOH B 58 3258 160 HOH HOH . R 4 HOH B 59 3259 33 HOH HOH . R 4 HOH B 60 3260 21 HOH HOH . R 4 HOH B 61 3261 285 HOH HOH . R 4 HOH B 62 3262 94 HOH HOH . R 4 HOH B 63 3263 20 HOH HOH . R 4 HOH B 64 3264 215 HOH HOH . R 4 HOH B 65 3265 37 HOH HOH . R 4 HOH B 66 3266 55 HOH HOH . R 4 HOH B 67 3267 283 HOH HOH . R 4 HOH B 68 3268 77 HOH HOH . R 4 HOH B 69 3269 65 HOH HOH . R 4 HOH B 70 3270 32 HOH HOH . R 4 HOH B 71 3271 128 HOH HOH . R 4 HOH B 72 3272 248 HOH HOH . R 4 HOH B 73 3273 200 HOH HOH . R 4 HOH B 74 3274 74 HOH HOH . R 4 HOH B 75 3275 50 HOH HOH . R 4 HOH B 76 3276 86 HOH HOH . R 4 HOH B 77 3277 72 HOH HOH . R 4 HOH B 78 3278 53 HOH HOH . R 4 HOH B 79 3279 227 HOH HOH . R 4 HOH B 80 3280 222 HOH HOH . R 4 HOH B 81 3281 152 HOH HOH . R 4 HOH B 82 3282 107 HOH HOH . R 4 HOH B 83 3283 22 HOH HOH . R 4 HOH B 84 3284 180 HOH HOH . R 4 HOH B 85 3285 71 HOH HOH . R 4 HOH B 86 3286 134 HOH HOH . R 4 HOH B 87 3287 236 HOH HOH . R 4 HOH B 88 3288 191 HOH HOH . R 4 HOH B 89 3289 113 HOH HOH . R 4 HOH B 90 3290 288 HOH HOH . R 4 HOH B 91 3291 90 HOH HOH . R 4 HOH B 92 3292 158 HOH HOH . R 4 HOH B 93 3293 272 HOH HOH . R 4 HOH B 94 3294 52 HOH HOH . R 4 HOH B 95 3295 153 HOH HOH . R 4 HOH B 96 3296 29 HOH HOH . R 4 HOH B 97 3297 79 HOH HOH . R 4 HOH B 98 3298 95 HOH HOH . R 4 HOH B 99 3299 41 HOH HOH . R 4 HOH B 100 3300 170 HOH HOH . R 4 HOH B 101 3301 257 HOH HOH . R 4 HOH B 102 3302 36 HOH HOH . R 4 HOH B 103 3303 274 HOH HOH . R 4 HOH B 104 3304 241 HOH HOH . R 4 HOH B 105 3305 184 HOH HOH . R 4 HOH B 106 3306 216 HOH HOH . R 4 HOH B 107 3307 159 HOH HOH . R 4 HOH B 108 3308 187 HOH HOH . R 4 HOH B 109 3309 117 HOH HOH . R 4 HOH B 110 3310 258 HOH HOH . R 4 HOH B 111 3311 143 HOH HOH . R 4 HOH B 112 3312 251 HOH HOH . R 4 HOH B 113 3313 156 HOH HOH . R 4 HOH B 114 3314 277 HOH HOH . R 4 HOH B 115 3315 168 HOH HOH . R 4 HOH B 116 3316 282 HOH HOH . R 4 HOH B 117 3317 235 HOH HOH . R 4 HOH B 118 3318 166 HOH HOH . R 4 HOH B 119 3319 142 HOH HOH . R 4 HOH B 120 3320 151 HOH HOH . R 4 HOH B 121 3321 146 HOH HOH . R 4 HOH B 122 3322 203 HOH HOH . R 4 HOH B 123 3323 102 HOH HOH . R 4 HOH B 124 3324 270 HOH HOH . R 4 HOH B 125 3325 232 HOH HOH . R 4 HOH B 126 3326 193 HOH HOH . R 4 HOH B 127 3327 194 HOH HOH . R 4 HOH B 128 3328 149 HOH HOH . R 4 HOH B 129 3329 239 HOH HOH . R 4 HOH B 130 3330 252 HOH HOH . R 4 HOH B 131 3331 123 HOH HOH . R 4 HOH B 132 3332 129 HOH HOH . R 4 HOH B 133 3333 88 HOH HOH . R 4 HOH B 134 3334 135 HOH HOH . R 4 HOH B 135 3335 217 HOH HOH . R 4 HOH B 136 3336 133 HOH HOH . R 4 HOH B 137 3337 192 HOH HOH . R 4 HOH B 138 3338 61 HOH HOH . R 4 HOH B 139 3339 256 HOH HOH . R 4 HOH B 140 3340 271 HOH HOH . R 4 HOH B 141 3341 140 HOH HOH . R 4 HOH B 142 3342 99 HOH HOH . R 4 HOH B 143 3343 289 HOH HOH . R 4 HOH B 144 3344 154 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 3 -22.781 -19.044 7.297 1 13.61 ? C1 EDO 3106 A 1 HETATM 2 O O1 EDO . . . H 3 -22.71 -17.623 7.466 1 11.16 ? O1 EDO 3106 A 1 HETATM 3 C C2 EDO . . . H 3 -24.241 -19.439 7.124 1 13.06 ? C2 EDO 3106 A 1 HETATM 4 O O2 EDO . . . H 3 -24.721 -18.941 5.871 1 14.44 ? O2 EDO 3106 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #