data_7LS4 # _model_server_result.job_id 7aZ2u1eFdUor4vhRWd-Jew _model_server_result.datetime_utc '2024-11-15 02:55:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ls4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7LS4 # _exptl.entry_id 7LS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 293.363 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[5,5-dimethyl-3-(2-methylphenyl)-4~{H}-pyrazol-1-yl]-pyridin-4-yl-methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LS4 _cell.length_a 58.914 _cell.length_b 63.625 _cell.length_c 123.457 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 417 A CYS 437 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 B FE HEM . A HEM 501 1_555 C N19 YCG . A YCG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? # _chem_comp.formula 'C18 H19 N3 O' _chem_comp.formula_weight 293.363 _chem_comp.id YCG _chem_comp.mon_nstd_flag . _chem_comp.name '[5,5-dimethyl-3-(2-methylphenyl)-4~{H}-pyrazol-1-yl]-pyridin-4-yl-methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 YCG sing 458 n n O22 C13 YCG doub 459 n n C13 C10 YCG sing 460 n n C13 N21 YCG sing 461 n n C6 C10 YCG doub 462 n y C6 C8 YCG sing 463 n y C15 C18 YCG sing 464 n n C15 N21 YCG sing 465 n n C15 C14 YCG sing 466 n n C10 C5 YCG sing 467 n y C8 N19 YCG doub 468 n y N21 N20 YCG sing 469 n n C5 C7 YCG doub 470 n y N19 C7 YCG sing 471 n y C14 C12 YCG sing 472 n n N20 C12 YCG doub 473 n n C12 C9 YCG sing 474 n n C16 C11 YCG sing 475 n n C9 C11 YCG doub 476 n y C9 C3 YCG sing 477 n y C11 C4 YCG sing 478 n y C3 C1 YCG doub 479 n y C4 C2 YCG doub 480 n y C1 C2 YCG sing 481 n y C4 H1 YCG sing 482 n n C5 H2 YCG sing 483 n n C6 H3 YCG sing 484 n n C7 H4 YCG sing 485 n n C8 H5 YCG sing 486 n n C17 H6 YCG sing 487 n n C17 H7 YCG sing 488 n n C17 H8 YCG sing 489 n n C1 H9 YCG sing 490 n n C2 H10 YCG sing 491 n n C3 H11 YCG sing 492 n n C14 H12 YCG sing 493 n n C14 H13 YCG sing 494 n n C16 H14 YCG sing 495 n n C16 H15 YCG sing 496 n n C16 H16 YCG sing 497 n n C18 H17 YCG sing 498 n n C18 H18 YCG sing 499 n n C18 H19 YCG sing 500 n n # _atom_sites.entry_id 7LS4 _atom_sites.fract_transf_matrix[1][1] 0.016974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 602 HEM HEM . C 3 YCG A 1 502 603 YCG LIG . D 4 HOH A 1 601 233 HOH HOH . D 4 HOH A 2 602 235 HOH HOH . D 4 HOH A 3 603 122 HOH HOH . D 4 HOH A 4 604 124 HOH HOH . D 4 HOH A 5 605 99 HOH HOH . D 4 HOH A 6 606 236 HOH HOH . D 4 HOH A 7 607 231 HOH HOH . D 4 HOH A 8 608 151 HOH HOH . D 4 HOH A 9 609 224 HOH HOH . D 4 HOH A 10 610 210 HOH HOH . D 4 HOH A 11 611 103 HOH HOH . D 4 HOH A 12 612 181 HOH HOH . D 4 HOH A 13 613 214 HOH HOH . D 4 HOH A 14 614 135 HOH HOH . D 4 HOH A 15 615 150 HOH HOH . D 4 HOH A 16 616 18 HOH HOH . D 4 HOH A 17 617 232 HOH HOH . D 4 HOH A 18 618 65 HOH HOH . D 4 HOH A 19 619 138 HOH HOH . D 4 HOH A 20 620 162 HOH HOH . D 4 HOH A 21 621 48 HOH HOH . D 4 HOH A 22 622 148 HOH HOH . D 4 HOH A 23 623 127 HOH HOH . D 4 HOH A 24 624 35 HOH HOH . D 4 HOH A 25 625 96 HOH HOH . D 4 HOH A 26 626 184 HOH HOH . D 4 HOH A 27 627 89 HOH HOH . D 4 HOH A 28 628 149 HOH HOH . D 4 HOH A 29 629 169 HOH HOH . D 4 HOH A 30 630 198 HOH HOH . D 4 HOH A 31 631 11 HOH HOH . D 4 HOH A 32 632 33 HOH HOH . D 4 HOH A 33 633 75 HOH HOH . D 4 HOH A 34 634 217 HOH HOH . D 4 HOH A 35 635 108 HOH HOH . D 4 HOH A 36 636 191 HOH HOH . D 4 HOH A 37 637 20 HOH HOH . D 4 HOH A 38 638 17 HOH HOH . D 4 HOH A 39 639 10 HOH HOH . D 4 HOH A 40 640 19 HOH HOH . D 4 HOH A 41 641 91 HOH HOH . D 4 HOH A 42 642 234 HOH HOH . D 4 HOH A 43 643 136 HOH HOH . D 4 HOH A 44 644 73 HOH HOH . D 4 HOH A 45 645 225 HOH HOH . D 4 HOH A 46 646 3 HOH HOH . D 4 HOH A 47 647 14 HOH HOH . D 4 HOH A 48 648 92 HOH HOH . D 4 HOH A 49 649 116 HOH HOH . D 4 HOH A 50 650 174 HOH HOH . D 4 HOH A 51 651 227 HOH HOH . D 4 HOH A 52 652 21 HOH HOH . D 4 HOH A 53 653 52 HOH HOH . D 4 HOH A 54 654 222 HOH HOH . D 4 HOH A 55 655 228 HOH HOH . D 4 HOH A 56 656 230 HOH HOH . D 4 HOH A 57 657 16 HOH HOH . D 4 HOH A 58 658 32 HOH HOH . D 4 HOH A 59 659 167 HOH HOH . D 4 HOH A 60 660 141 HOH HOH . D 4 HOH A 61 661 53 HOH HOH . D 4 HOH A 62 662 60 HOH HOH . D 4 HOH A 63 663 175 HOH HOH . D 4 HOH A 64 664 93 HOH HOH . D 4 HOH A 65 665 58 HOH HOH . D 4 HOH A 66 666 40 HOH HOH . D 4 HOH A 67 667 68 HOH HOH . D 4 HOH A 68 668 43 HOH HOH . D 4 HOH A 69 669 155 HOH HOH . D 4 HOH A 70 670 41 HOH HOH . D 4 HOH A 71 671 185 HOH HOH . D 4 HOH A 72 672 2 HOH HOH . D 4 HOH A 73 673 4 HOH HOH . D 4 HOH A 74 674 13 HOH HOH . D 4 HOH A 75 675 8 HOH HOH . D 4 HOH A 76 676 132 HOH HOH . D 4 HOH A 77 677 46 HOH HOH . D 4 HOH A 78 678 229 HOH HOH . D 4 HOH A 79 679 9 HOH HOH . D 4 HOH A 80 680 1 HOH HOH . D 4 HOH A 81 681 157 HOH HOH . D 4 HOH A 82 682 57 HOH HOH . D 4 HOH A 83 683 134 HOH HOH . D 4 HOH A 84 684 51 HOH HOH . D 4 HOH A 85 685 125 HOH HOH . D 4 HOH A 86 686 79 HOH HOH . D 4 HOH A 87 687 26 HOH HOH . D 4 HOH A 88 688 104 HOH HOH . D 4 HOH A 89 689 226 HOH HOH . D 4 HOH A 90 690 123 HOH HOH . D 4 HOH A 91 691 81 HOH HOH . D 4 HOH A 92 692 131 HOH HOH . D 4 HOH A 93 693 187 HOH HOH . D 4 HOH A 94 694 50 HOH HOH . D 4 HOH A 95 695 45 HOH HOH . D 4 HOH A 96 696 165 HOH HOH . D 4 HOH A 97 697 101 HOH HOH . D 4 HOH A 98 698 178 HOH HOH . D 4 HOH A 99 699 114 HOH HOH . D 4 HOH A 100 700 49 HOH HOH . D 4 HOH A 101 701 205 HOH HOH . D 4 HOH A 102 702 170 HOH HOH . D 4 HOH A 103 703 183 HOH HOH . D 4 HOH A 104 704 69 HOH HOH . D 4 HOH A 105 705 28 HOH HOH . D 4 HOH A 106 706 24 HOH HOH . D 4 HOH A 107 707 86 HOH HOH . D 4 HOH A 108 708 12 HOH HOH . D 4 HOH A 109 709 67 HOH HOH . D 4 HOH A 110 710 29 HOH HOH . D 4 HOH A 111 711 47 HOH HOH . D 4 HOH A 112 712 144 HOH HOH . D 4 HOH A 113 713 61 HOH HOH . D 4 HOH A 114 714 189 HOH HOH . D 4 HOH A 115 715 30 HOH HOH . D 4 HOH A 116 716 102 HOH HOH . D 4 HOH A 117 717 72 HOH HOH . D 4 HOH A 118 718 88 HOH HOH . D 4 HOH A 119 719 208 HOH HOH . D 4 HOH A 120 720 7 HOH HOH . D 4 HOH A 121 721 100 HOH HOH . D 4 HOH A 122 722 196 HOH HOH . D 4 HOH A 123 723 146 HOH HOH . D 4 HOH A 124 724 113 HOH HOH . D 4 HOH A 125 725 105 HOH HOH . D 4 HOH A 126 726 180 HOH HOH . D 4 HOH A 127 727 74 HOH HOH . D 4 HOH A 128 728 128 HOH HOH . D 4 HOH A 129 729 159 HOH HOH . D 4 HOH A 130 730 156 HOH HOH . D 4 HOH A 131 731 163 HOH HOH . D 4 HOH A 132 732 133 HOH HOH . D 4 HOH A 133 733 23 HOH HOH . D 4 HOH A 134 734 200 HOH HOH . D 4 HOH A 135 735 142 HOH HOH . D 4 HOH A 136 736 5 HOH HOH . D 4 HOH A 137 737 166 HOH HOH . D 4 HOH A 138 738 121 HOH HOH . D 4 HOH A 139 739 77 HOH HOH . D 4 HOH A 140 740 36 HOH HOH . D 4 HOH A 141 741 31 HOH HOH . D 4 HOH A 142 742 107 HOH HOH . D 4 HOH A 143 743 115 HOH HOH . D 4 HOH A 144 744 152 HOH HOH . D 4 HOH A 145 745 199 HOH HOH . D 4 HOH A 146 746 54 HOH HOH . D 4 HOH A 147 747 25 HOH HOH . D 4 HOH A 148 748 129 HOH HOH . D 4 HOH A 149 749 44 HOH HOH . D 4 HOH A 150 750 153 HOH HOH . D 4 HOH A 151 751 6 HOH HOH . D 4 HOH A 152 752 66 HOH HOH . D 4 HOH A 153 753 27 HOH HOH . D 4 HOH A 154 754 42 HOH HOH . D 4 HOH A 155 755 15 HOH HOH . D 4 HOH A 156 756 182 HOH HOH . D 4 HOH A 157 757 62 HOH HOH . D 4 HOH A 158 758 168 HOH HOH . D 4 HOH A 159 759 110 HOH HOH . D 4 HOH A 160 760 126 HOH HOH . D 4 HOH A 161 761 39 HOH HOH . D 4 HOH A 162 762 70 HOH HOH . D 4 HOH A 163 763 80 HOH HOH . D 4 HOH A 164 764 22 HOH HOH . D 4 HOH A 165 765 164 HOH HOH . D 4 HOH A 166 766 38 HOH HOH . D 4 HOH A 167 767 94 HOH HOH . D 4 HOH A 168 768 212 HOH HOH . D 4 HOH A 169 769 201 HOH HOH . D 4 HOH A 170 770 37 HOH HOH . D 4 HOH A 171 771 190 HOH HOH . D 4 HOH A 172 772 34 HOH HOH . D 4 HOH A 173 773 84 HOH HOH . D 4 HOH A 174 774 55 HOH HOH . D 4 HOH A 175 775 211 HOH HOH . D 4 HOH A 176 776 140 HOH HOH . D 4 HOH A 177 777 64 HOH HOH . D 4 HOH A 178 778 195 HOH HOH . D 4 HOH A 179 779 111 HOH HOH . D 4 HOH A 180 780 87 HOH HOH . D 4 HOH A 181 781 188 HOH HOH . D 4 HOH A 182 782 59 HOH HOH . D 4 HOH A 183 783 147 HOH HOH . D 4 HOH A 184 784 95 HOH HOH . D 4 HOH A 185 785 161 HOH HOH . D 4 HOH A 186 786 71 HOH HOH . D 4 HOH A 187 787 177 HOH HOH . D 4 HOH A 188 788 223 HOH HOH . D 4 HOH A 189 789 209 HOH HOH . D 4 HOH A 190 790 56 HOH HOH . D 4 HOH A 191 791 82 HOH HOH . D 4 HOH A 192 792 186 HOH HOH . D 4 HOH A 193 793 139 HOH HOH . D 4 HOH A 194 794 98 HOH HOH . D 4 HOH A 195 795 154 HOH HOH . D 4 HOH A 196 796 213 HOH HOH . D 4 HOH A 197 797 90 HOH HOH . D 4 HOH A 198 798 158 HOH HOH . D 4 HOH A 199 799 173 HOH HOH . D 4 HOH A 200 800 120 HOH HOH . D 4 HOH A 201 801 85 HOH HOH . D 4 HOH A 202 802 137 HOH HOH . D 4 HOH A 203 803 112 HOH HOH . D 4 HOH A 204 804 143 HOH HOH . D 4 HOH A 205 805 176 HOH HOH . D 4 HOH A 206 806 179 HOH HOH . D 4 HOH A 207 807 171 HOH HOH . D 4 HOH A 208 808 216 HOH HOH . D 4 HOH A 209 809 97 HOH HOH . D 4 HOH A 210 810 119 HOH HOH . D 4 HOH A 211 811 172 HOH HOH . D 4 HOH A 212 812 160 HOH HOH . D 4 HOH A 213 813 197 HOH HOH . D 4 HOH A 214 814 78 HOH HOH . D 4 HOH A 215 815 106 HOH HOH . D 4 HOH A 216 816 218 HOH HOH . D 4 HOH A 217 817 145 HOH HOH . D 4 HOH A 218 818 63 HOH HOH . D 4 HOH A 219 819 117 HOH HOH . D 4 HOH A 220 820 76 HOH HOH . D 4 HOH A 221 821 83 HOH HOH . D 4 HOH A 222 822 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 YCG . . . C 3 17.904 2.235 -19 1 30.81 ? C4 YCG 502 A 1 HETATM 2 C C5 YCG . . . C 3 14.798 -3.909 -22.139 1 22.92 ? C5 YCG 502 A 1 HETATM 3 C C6 YCG . . . C 3 14.971 -1.642 -22.854 1 25.47 ? C6 YCG 502 A 1 HETATM 4 C C7 YCG . . . C 3 13.46 -3.688 -21.917 1 23.26 ? C7 YCG 502 A 1 HETATM 5 C C8 YCG . . . C 3 13.62 -1.536 -22.582 1 22.48 ? C8 YCG 502 A 1 HETATM 6 C C10 YCG . . . C 3 15.558 -2.862 -22.607 1 25.61 ? C10 YCG 502 A 1 HETATM 7 C C13 YCG . . . C 3 16.994 -3.098 -22.895 1 26.3 ? C13 YCG 502 A 1 HETATM 8 C C15 YCG . . . C 3 19.366 -2.355 -22.617 1 27.58 ? C15 YCG 502 A 1 HETATM 9 C C17 YCG . . . C 3 19.654 -1.88 -24.019 1 27.9 ? C17 YCG 502 A 1 HETATM 10 C C1 YCG . . . C 3 19.835 1.138 -18.103 1 30.22 ? C1 YCG 502 A 1 HETATM 11 C C2 YCG . . . C 3 18.914 2.168 -18.063 1 30.7 ? C2 YCG 502 A 1 HETATM 12 C C3 YCG . . . C 3 19.741 0.174 -19.085 1 28.28 ? C3 YCG 502 A 1 HETATM 13 C C9 YCG . . . C 3 18.732 0.243 -20.026 1 27.2 ? C9 YCG 502 A 1 HETATM 14 C C11 YCG . . . C 3 17.813 1.272 -19.991 1 29.42 ? C11 YCG 502 A 1 HETATM 15 C C12 YCG . . . C 3 18.71 -0.829 -21.03 1 26.65 ? C12 YCG 502 A 1 HETATM 16 C C14 YCG . . . C 3 19.966 -1.404 -21.619 1 25.05 ? C14 YCG 502 A 1 HETATM 17 C C16 YCG . . . C 3 16.702 1.402 -20.99 1 30.34 ? C16 YCG 502 A 1 HETATM 18 C C18 YCG . . . C 3 19.962 -3.721 -22.392 1 29.16 ? C18 YCG 502 A 1 HETATM 19 N N19 YCG . . . C 3 12.832 -2.516 -22.121 1 21.56 ? N19 YCG 502 A 1 HETATM 20 N N20 YCG . . . C 3 17.611 -1.369 -21.42 1 25.71 ? N20 YCG 502 A 1 HETATM 21 N N21 YCG . . . C 3 17.946 -2.318 -22.297 1 27.67 ? N21 YCG 502 A 1 HETATM 22 O O22 YCG . . . C 3 17.254 -3.995 -23.696 1 30.37 ? O22 YCG 502 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #