data_7LTA # _model_server_result.job_id NgrnGzyLAsgldCD5oWHEww _model_server_result.datetime_utc '2024-11-16 23:31:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":204}' # _entry.id 7LTA # _exptl.entry_id 7LTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7LTA _cell.length_a 42.788 _cell.length_b 58.09 _cell.length_c 112.467 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O1 _pdbx_entity_branch_link.leaving_atom_id_2 HO1 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 E 1 GLC C 1 XXX 2 n C GLC 2 E 2 GLC C 1 XXX # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 14 A GLU 15 1_555 A N CME 15 A CME 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CME 15 A CME 16 1_555 A N LEU 16 A LEU 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C VAL 86 A VAL 87 1_555 A N CME 87 A CME 88 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 A C VAL 86 A VAL 87 1_555 A N CME 87 A CME 88 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C CME 87 A CME 88 1_555 A N ILE 88 A ILE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C LYS 128 A LYS 129 1_555 A N CME 129 A CME 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 A C CME 129 A CME 130 1_555 A N VAL 130 A VAL 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 B C GLU 14 B GLU 15 1_555 B N CME 15 B CME 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 B C CME 15 B CME 16 1_555 B N LEU 16 B LEU 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 B C VAL 86 B VAL 87 1_555 B N CME 87 B CME 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C CME 87 B CME 88 1_555 B N ILE 88 B ILE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 B C LYS 128 B LYS 129 1_555 B N CME 129 B CME 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 B C CME 129 B CME 130 1_555 B N VAL 130 B VAL 131 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.326 ? covale ? covale14 B C CME 129 B CME 130 1_555 B N VAL 130 B VAL 131 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.327 ? covale ? covale15 C C1 GLC . E GLC 1 1_555 C O1 GLC . E GLC 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.436 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 104 n n S C1 DMS sing 105 n n S C2 DMS sing 106 n n C1 H11 DMS sing 107 n n C1 H12 DMS sing 108 n n C1 H13 DMS sing 109 n n C2 H21 DMS sing 110 n n C2 H22 DMS sing 111 n n C2 H23 DMS sing 112 n n # _atom_sites.entry_id 7LTA _atom_sites.fract_transf_matrix[1][1] 0.023371 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 DMS A 1 201 3096 DMS DMS . E 3 DMS B 1 201 3092 DMS DMS . F 3 DMS B 1 202 3093 DMS DMS . G 3 DMS B 1 203 3094 DMS DMS . H 3 DMS B 1 204 3097 DMS DMS . I 3 DMS B 1 205 3098 DMS DMS . J 3 DMS B 1 206 3099 DMS DMS . K 3 DMS B 1 207 3100 DMS DMS . L 4 HOH A 1 301 121 HOH HOH . L 4 HOH A 2 302 173 HOH HOH . L 4 HOH A 3 303 31 HOH HOH . L 4 HOH A 4 304 155 HOH HOH . L 4 HOH A 5 305 135 HOH HOH . L 4 HOH A 6 306 146 HOH HOH . L 4 HOH A 7 307 29 HOH HOH . L 4 HOH A 8 308 26 HOH HOH . L 4 HOH A 9 309 500 HOH HOH . L 4 HOH A 10 310 122 HOH HOH . L 4 HOH A 11 311 150 HOH HOH . L 4 HOH A 12 312 107 HOH HOH . L 4 HOH A 13 313 15 HOH HOH . L 4 HOH A 14 314 55 HOH HOH . L 4 HOH A 15 315 64 HOH HOH . L 4 HOH A 16 316 44 HOH HOH . L 4 HOH A 17 317 8 HOH HOH . L 4 HOH A 18 318 83 HOH HOH . L 4 HOH A 19 319 19 HOH HOH . L 4 HOH A 20 320 502 HOH HOH . L 4 HOH A 21 321 110 HOH HOH . L 4 HOH A 22 322 56 HOH HOH . L 4 HOH A 23 323 102 HOH HOH . L 4 HOH A 24 324 152 HOH HOH . L 4 HOH A 25 325 13 HOH HOH . L 4 HOH A 26 326 88 HOH HOH . L 4 HOH A 27 327 3 HOH HOH . L 4 HOH A 28 328 158 HOH HOH . L 4 HOH A 29 329 175 HOH HOH . L 4 HOH A 30 330 72 HOH HOH . L 4 HOH A 31 331 75 HOH HOH . L 4 HOH A 32 332 28 HOH HOH . L 4 HOH A 33 333 47 HOH HOH . L 4 HOH A 34 334 93 HOH HOH . L 4 HOH A 35 335 97 HOH HOH . L 4 HOH A 36 336 111 HOH HOH . L 4 HOH A 37 337 126 HOH HOH . L 4 HOH A 38 338 5 HOH HOH . L 4 HOH A 39 339 154 HOH HOH . L 4 HOH A 40 340 174 HOH HOH . L 4 HOH A 41 341 16 HOH HOH . L 4 HOH A 42 342 112 HOH HOH . L 4 HOH A 43 343 161 HOH HOH . L 4 HOH A 44 344 11 HOH HOH . L 4 HOH A 45 345 99 HOH HOH . L 4 HOH A 46 346 94 HOH HOH . L 4 HOH A 47 347 100 HOH HOH . L 4 HOH A 48 348 76 HOH HOH . L 4 HOH A 49 349 106 HOH HOH . L 4 HOH A 50 350 87 HOH HOH . L 4 HOH A 51 351 156 HOH HOH . L 4 HOH A 52 352 17 HOH HOH . L 4 HOH A 53 353 71 HOH HOH . L 4 HOH A 54 354 37 HOH HOH . L 4 HOH A 55 355 144 HOH HOH . L 4 HOH A 56 356 92 HOH HOH . L 4 HOH A 57 357 53 HOH HOH . L 4 HOH A 58 358 157 HOH HOH . L 4 HOH A 59 359 50 HOH HOH . L 4 HOH A 60 360 61 HOH HOH . L 4 HOH A 61 361 168 HOH HOH . L 4 HOH A 62 362 12 HOH HOH . L 4 HOH A 63 363 113 HOH HOH . L 4 HOH A 64 364 153 HOH HOH . L 4 HOH A 65 365 34 HOH HOH . L 4 HOH A 66 366 130 HOH HOH . L 4 HOH A 67 367 41 HOH HOH . L 4 HOH A 68 368 54 HOH HOH . L 4 HOH A 69 369 51 HOH HOH . L 4 HOH A 70 370 139 HOH HOH . L 4 HOH A 71 371 501 HOH HOH . L 4 HOH A 72 372 117 HOH HOH . L 4 HOH A 73 373 151 HOH HOH . L 4 HOH A 74 374 118 HOH HOH . L 4 HOH A 75 375 6 HOH HOH . L 4 HOH A 76 376 138 HOH HOH . L 4 HOH A 77 377 101 HOH HOH . L 4 HOH A 78 378 48 HOH HOH . L 4 HOH A 79 379 149 HOH HOH . L 4 HOH A 80 380 134 HOH HOH . L 4 HOH A 81 381 160 HOH HOH . L 4 HOH A 82 382 74 HOH HOH . L 4 HOH A 83 383 89 HOH HOH . L 4 HOH A 84 384 114 HOH HOH . L 4 HOH A 85 385 131 HOH HOH . L 4 HOH A 86 386 95 HOH HOH . L 4 HOH A 87 387 67 HOH HOH . L 4 HOH A 88 388 77 HOH HOH . L 4 HOH A 89 389 147 HOH HOH . L 4 HOH A 90 390 165 HOH HOH . M 4 HOH B 1 301 105 HOH HOH . M 4 HOH B 2 302 136 HOH HOH . M 4 HOH B 3 303 128 HOH HOH . M 4 HOH B 4 304 108 HOH HOH . M 4 HOH B 5 305 164 HOH HOH . M 4 HOH B 6 306 170 HOH HOH . M 4 HOH B 7 307 33 HOH HOH . M 4 HOH B 8 308 116 HOH HOH . M 4 HOH B 9 309 60 HOH HOH . M 4 HOH B 10 310 145 HOH HOH . M 4 HOH B 11 311 43 HOH HOH . M 4 HOH B 12 312 163 HOH HOH . M 4 HOH B 13 313 63 HOH HOH . M 4 HOH B 14 314 2 HOH HOH . M 4 HOH B 15 315 59 HOH HOH . M 4 HOH B 16 316 86 HOH HOH . M 4 HOH B 17 317 96 HOH HOH . M 4 HOH B 18 318 140 HOH HOH . M 4 HOH B 19 319 109 HOH HOH . M 4 HOH B 20 320 1 HOH HOH . M 4 HOH B 21 321 137 HOH HOH . M 4 HOH B 22 322 79 HOH HOH . M 4 HOH B 23 323 30 HOH HOH . M 4 HOH B 24 324 68 HOH HOH . M 4 HOH B 25 325 162 HOH HOH . M 4 HOH B 26 326 23 HOH HOH . M 4 HOH B 27 327 52 HOH HOH . M 4 HOH B 28 328 49 HOH HOH . M 4 HOH B 29 329 39 HOH HOH . M 4 HOH B 30 330 148 HOH HOH . M 4 HOH B 31 331 124 HOH HOH . M 4 HOH B 32 332 22 HOH HOH . M 4 HOH B 33 333 24 HOH HOH . M 4 HOH B 34 334 25 HOH HOH . M 4 HOH B 35 335 10 HOH HOH . M 4 HOH B 36 336 129 HOH HOH . M 4 HOH B 37 337 70 HOH HOH . M 4 HOH B 38 338 84 HOH HOH . M 4 HOH B 39 339 45 HOH HOH . M 4 HOH B 40 340 80 HOH HOH . M 4 HOH B 41 341 103 HOH HOH . M 4 HOH B 42 342 27 HOH HOH . M 4 HOH B 43 343 90 HOH HOH . M 4 HOH B 44 344 14 HOH HOH . M 4 HOH B 45 345 73 HOH HOH . M 4 HOH B 46 346 18 HOH HOH . M 4 HOH B 47 347 38 HOH HOH . M 4 HOH B 48 348 91 HOH HOH . M 4 HOH B 49 349 141 HOH HOH . M 4 HOH B 50 350 40 HOH HOH . M 4 HOH B 51 351 62 HOH HOH . M 4 HOH B 52 352 82 HOH HOH . M 4 HOH B 53 353 9 HOH HOH . M 4 HOH B 54 354 127 HOH HOH . M 4 HOH B 55 355 143 HOH HOH . M 4 HOH B 56 356 78 HOH HOH . M 4 HOH B 57 357 65 HOH HOH . M 4 HOH B 58 358 35 HOH HOH . M 4 HOH B 59 359 120 HOH HOH . M 4 HOH B 60 360 57 HOH HOH . M 4 HOH B 61 361 32 HOH HOH . M 4 HOH B 62 362 4 HOH HOH . M 4 HOH B 63 363 7 HOH HOH . M 4 HOH B 64 364 159 HOH HOH . M 4 HOH B 65 365 46 HOH HOH . M 4 HOH B 66 366 172 HOH HOH . M 4 HOH B 67 367 36 HOH HOH . M 4 HOH B 68 368 166 HOH HOH . M 4 HOH B 69 369 58 HOH HOH . M 4 HOH B 70 370 42 HOH HOH . M 4 HOH B 71 371 98 HOH HOH . M 4 HOH B 72 372 125 HOH HOH . M 4 HOH B 73 373 21 HOH HOH . M 4 HOH B 74 374 81 HOH HOH . M 4 HOH B 75 375 115 HOH HOH . M 4 HOH B 76 376 20 HOH HOH . M 4 HOH B 77 377 66 HOH HOH . M 4 HOH B 78 378 104 HOH HOH . M 4 HOH B 79 379 123 HOH HOH . M 4 HOH B 80 380 69 HOH HOH . M 4 HOH B 81 381 169 HOH HOH . M 4 HOH B 82 382 85 HOH HOH . M 4 HOH B 83 383 171 HOH HOH . M 4 HOH B 84 384 132 HOH HOH . M 4 HOH B 85 385 167 HOH HOH . M 4 HOH B 86 386 133 HOH HOH . M 4 HOH B 87 387 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 3 6.297 21.01 -6.105 1 88.77 ? S DMS 204 B 1 HETATM 2 O O DMS . . . H 3 6.44 22.181 -7.038 1 48.99 ? O DMS 204 B 1 HETATM 3 C C1 DMS . . . H 3 4.845 20.018 -6.551 1 57.29 ? C1 DMS 204 B 1 HETATM 4 C C2 DMS . . . H 3 7.638 19.82 -6.376 1 65.28 ? C2 DMS 204 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #