data_7LV1 # _model_server_result.job_id Ao1Lrl_-a6YTWjL3HFpR0g _model_server_result.datetime_utc '2024-11-15 21:57:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7LV1 # _exptl.entry_id 7LV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.827 _cell.angle_gamma 90 _cell.entry_id 7LV1 _cell.length_a 34.172 _cell.length_b 83.211 _cell.length_c 38.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 C CYS 96 1_555 B SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? covale ? covale1 A SG CYS 98 C CYS 98 1_555 C CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? covale ? covale2 A SG CYS 101 C CYS 101 1_555 C CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? covale ? covale3 B SG CYS 98 A CYS 98 1_555 F CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? covale ? covale4 B SG CYS 101 A CYS 101 1_555 F CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? metalc ? metalc1 A OE2 GLU 4 C GLU 4 1_555 E CA CA . C CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc2 A SD MET 7 C MET 7 1_555 C FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 A NE2 HIS 67 C HIS 67 1_555 G CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc4 A NE2 HIS 71 C HIS 71 1_555 G CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc5 A NE2 HIS 102 C HIS 102 1_555 C FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc6 C O1A HEC . C HEC 201 1_555 E CA CA . C CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc7 D CA CA . C CA 202 1_655 B OE1 GLU 4 A GLU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc8 D CA CA . C CA 202 1_555 F O2A HEC . A HEC 201 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc9 D CA CA . C CA 202 1_555 K O HOH . A HOH 303 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc10 D CA CA . C CA 202 1_555 K O HOH . A HOH 342 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc11 E CA CA . C CA 203 1_555 J O HOH . C HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3 ? metalc ? metalc12 E CA CA . C CA 203 1_555 J O HOH . C HOH 313 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc13 E CA CA . C CA 203 1_555 J O HOH . C HOH 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc14 B SD MET 7 A MET 7 1_555 F FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc15 B O LYS 19 A LYS 19 1_555 H CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc16 B OD1 ASP 21 A ASP 21 1_555 H CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc17 B OD2 ASP 21 A ASP 21 1_555 H CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? metalc ? metalc18 B O LEU 38 A LEU 38 1_555 I CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc19 B OE1 GLN 41 A GLN 41 1_555 I CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc20 B NE2 HIS 67 A HIS 67 1_555 G CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc21 B NE2 HIS 71 A HIS 71 1_555 G CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc22 B NE2 HIS 97 A HIS 97 1_555 G CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc23 B NE2 HIS 102 A HIS 102 1_555 F FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc24 H CA CA . A CA 203 1_555 K O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc25 H CA CA . A CA 203 1_555 K O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc26 I CA CA . A CA 204 1_555 K O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7LV1 _atom_sites.fract_transf_matrix[1][1] 0.029264 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005597 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012018 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEC C 1 201 150 HEC HEM . D 3 CA C 1 202 1 CA CA . E 3 CA C 1 203 3 CA CA . F 2 HEC A 1 201 150 HEC HEM . G 4 CU A 1 202 1 CU CU . H 3 CA A 1 203 2 CA CA . I 3 CA A 1 204 4 CA CA . J 5 HOH C 1 301 116 HOH HOH . J 5 HOH C 2 302 4 HOH HOH . J 5 HOH C 3 303 158 HOH HOH . J 5 HOH C 4 304 146 HOH HOH . J 5 HOH C 5 305 134 HOH HOH . J 5 HOH C 6 306 168 HOH HOH . J 5 HOH C 7 307 48 HOH HOH . J 5 HOH C 8 308 55 HOH HOH . J 5 HOH C 9 309 125 HOH HOH . J 5 HOH C 10 310 65 HOH HOH . J 5 HOH C 11 311 88 HOH HOH . J 5 HOH C 12 312 68 HOH HOH . J 5 HOH C 13 313 98 HOH HOH . J 5 HOH C 14 314 24 HOH HOH . J 5 HOH C 15 315 43 HOH HOH . J 5 HOH C 16 316 75 HOH HOH . J 5 HOH C 17 317 27 HOH HOH . J 5 HOH C 18 318 46 HOH HOH . J 5 HOH C 19 319 9 HOH HOH . J 5 HOH C 20 320 155 HOH HOH . J 5 HOH C 21 321 62 HOH HOH . J 5 HOH C 22 322 21 HOH HOH . J 5 HOH C 23 323 8 HOH HOH . J 5 HOH C 24 324 107 HOH HOH . J 5 HOH C 25 325 31 HOH HOH . J 5 HOH C 26 326 63 HOH HOH . J 5 HOH C 27 327 128 HOH HOH . J 5 HOH C 28 328 16 HOH HOH . J 5 HOH C 29 329 156 HOH HOH . J 5 HOH C 30 330 2 HOH HOH . J 5 HOH C 31 331 53 HOH HOH . J 5 HOH C 32 332 89 HOH HOH . J 5 HOH C 33 333 160 HOH HOH . J 5 HOH C 34 334 159 HOH HOH . J 5 HOH C 35 335 103 HOH HOH . J 5 HOH C 36 336 50 HOH HOH . J 5 HOH C 37 337 20 HOH HOH . J 5 HOH C 38 338 136 HOH HOH . J 5 HOH C 39 339 39 HOH HOH . J 5 HOH C 40 340 40 HOH HOH . J 5 HOH C 41 341 10 HOH HOH . J 5 HOH C 42 342 23 HOH HOH . J 5 HOH C 43 343 64 HOH HOH . J 5 HOH C 44 344 118 HOH HOH . J 5 HOH C 45 345 5 HOH HOH . J 5 HOH C 46 346 93 HOH HOH . J 5 HOH C 47 347 70 HOH HOH . J 5 HOH C 48 348 15 HOH HOH . J 5 HOH C 49 349 52 HOH HOH . J 5 HOH C 50 350 41 HOH HOH . J 5 HOH C 51 351 154 HOH HOH . J 5 HOH C 52 352 108 HOH HOH . J 5 HOH C 53 353 129 HOH HOH . J 5 HOH C 54 354 142 HOH HOH . J 5 HOH C 55 355 138 HOH HOH . J 5 HOH C 56 356 113 HOH HOH . J 5 HOH C 57 357 148 HOH HOH . J 5 HOH C 58 358 78 HOH HOH . J 5 HOH C 59 359 91 HOH HOH . J 5 HOH C 60 360 95 HOH HOH . J 5 HOH C 61 361 140 HOH HOH . J 5 HOH C 62 362 30 HOH HOH . J 5 HOH C 63 363 115 HOH HOH . J 5 HOH C 64 364 143 HOH HOH . J 5 HOH C 65 365 153 HOH HOH . J 5 HOH C 66 366 124 HOH HOH . J 5 HOH C 67 367 83 HOH HOH . J 5 HOH C 68 368 114 HOH HOH . J 5 HOH C 69 369 25 HOH HOH . J 5 HOH C 70 370 61 HOH HOH . J 5 HOH C 71 371 127 HOH HOH . J 5 HOH C 72 372 104 HOH HOH . J 5 HOH C 73 373 44 HOH HOH . J 5 HOH C 74 374 157 HOH HOH . J 5 HOH C 75 375 57 HOH HOH . J 5 HOH C 76 376 123 HOH HOH . J 5 HOH C 77 377 110 HOH HOH . J 5 HOH C 78 378 66 HOH HOH . J 5 HOH C 79 379 76 HOH HOH . J 5 HOH C 80 380 101 HOH HOH . K 5 HOH A 1 301 121 HOH HOH . K 5 HOH A 2 302 117 HOH HOH . K 5 HOH A 3 303 51 HOH HOH . K 5 HOH A 4 304 59 HOH HOH . K 5 HOH A 5 305 87 HOH HOH . K 5 HOH A 6 306 6 HOH HOH . K 5 HOH A 7 307 18 HOH HOH . K 5 HOH A 8 308 17 HOH HOH . K 5 HOH A 9 309 147 HOH HOH . K 5 HOH A 10 310 11 HOH HOH . K 5 HOH A 11 311 150 HOH HOH . K 5 HOH A 12 312 35 HOH HOH . K 5 HOH A 13 313 137 HOH HOH . K 5 HOH A 14 314 67 HOH HOH . K 5 HOH A 15 315 86 HOH HOH . K 5 HOH A 16 316 58 HOH HOH . K 5 HOH A 17 317 26 HOH HOH . K 5 HOH A 18 318 144 HOH HOH . K 5 HOH A 19 319 19 HOH HOH . K 5 HOH A 20 320 37 HOH HOH . K 5 HOH A 21 321 120 HOH HOH . K 5 HOH A 22 322 81 HOH HOH . K 5 HOH A 23 323 162 HOH HOH . K 5 HOH A 24 324 13 HOH HOH . K 5 HOH A 25 325 80 HOH HOH . K 5 HOH A 26 326 14 HOH HOH . K 5 HOH A 27 327 71 HOH HOH . K 5 HOH A 28 328 33 HOH HOH . K 5 HOH A 29 329 22 HOH HOH . K 5 HOH A 30 330 119 HOH HOH . K 5 HOH A 31 331 28 HOH HOH . K 5 HOH A 32 332 1 HOH HOH . K 5 HOH A 33 333 149 HOH HOH . K 5 HOH A 34 334 96 HOH HOH . K 5 HOH A 35 335 106 HOH HOH . K 5 HOH A 36 336 100 HOH HOH . K 5 HOH A 37 337 132 HOH HOH . K 5 HOH A 38 338 42 HOH HOH . K 5 HOH A 39 339 29 HOH HOH . K 5 HOH A 40 340 152 HOH HOH . K 5 HOH A 41 341 105 HOH HOH . K 5 HOH A 42 342 122 HOH HOH . K 5 HOH A 43 343 54 HOH HOH . K 5 HOH A 44 344 94 HOH HOH . K 5 HOH A 45 345 45 HOH HOH . K 5 HOH A 46 346 126 HOH HOH . K 5 HOH A 47 347 99 HOH HOH . K 5 HOH A 48 348 32 HOH HOH . K 5 HOH A 49 349 131 HOH HOH . K 5 HOH A 50 350 85 HOH HOH . K 5 HOH A 51 351 135 HOH HOH . K 5 HOH A 52 352 72 HOH HOH . K 5 HOH A 53 353 12 HOH HOH . K 5 HOH A 54 354 38 HOH HOH . K 5 HOH A 55 355 74 HOH HOH . K 5 HOH A 56 356 145 HOH HOH . K 5 HOH A 57 357 141 HOH HOH . K 5 HOH A 58 358 49 HOH HOH . K 5 HOH A 59 359 164 HOH HOH . K 5 HOH A 60 360 165 HOH HOH . K 5 HOH A 61 361 73 HOH HOH . K 5 HOH A 62 362 109 HOH HOH . K 5 HOH A 63 363 69 HOH HOH . K 5 HOH A 64 364 151 HOH HOH . K 5 HOH A 65 365 60 HOH HOH . K 5 HOH A 66 366 79 HOH HOH . K 5 HOH A 67 367 36 HOH HOH . K 5 HOH A 68 368 56 HOH HOH . K 5 HOH A 69 369 82 HOH HOH . K 5 HOH A 70 370 34 HOH HOH . K 5 HOH A 71 371 84 HOH HOH . K 5 HOH A 72 372 163 HOH HOH . K 5 HOH A 73 373 130 HOH HOH . K 5 HOH A 74 374 167 HOH HOH . K 5 HOH A 75 375 102 HOH HOH . K 5 HOH A 76 376 77 HOH HOH . K 5 HOH A 77 377 90 HOH HOH . K 5 HOH A 78 378 97 HOH HOH . K 5 HOH A 79 379 112 HOH HOH . K 5 HOH A 80 380 161 HOH HOH . K 5 HOH A 81 381 92 HOH HOH . K 5 HOH A 82 382 47 HOH HOH . K 5 HOH A 83 383 133 HOH HOH . K 5 HOH A 84 384 111 HOH HOH . K 5 HOH A 85 385 166 HOH HOH . K 5 HOH A 86 386 139 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.106 _atom_site.Cartn_y 10.838 _atom_site.Cartn_z 7.827 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #