data_7LVH
#
_model_server_result.job_id            wOZ86GtnkKtLePSnYmQ17A 
_model_server_result.datetime_utc      '2024-11-25 08:17:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7lvh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    7LVH 
#
_exptl.entry_id    7LVH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.587 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7LVH 
_cell.length_a            91.514 
_cell.length_b            91.514 
_cell.length_c            172.145 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7LVH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H28 N8 S' 
_chem_comp.formula_weight    448.587 
_chem_comp.id                YFV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C32 C23 YFV sing 424 n n 
C31 C23 YFV sing 425 n n 
C23 C22 YFV sing 426 n n 
N21 C22 YFV doub 427 n y 
N21 N20 YFV sing 428 n y 
C22 S18 YFV sing 429 n y 
N20 C19 YFV doub 430 n y 
S18 C19 YFV sing 431 n y 
C19 C15 YFV sing 432 n n 
C15 C16 YFV doub 433 n y 
C15 C14 YFV sing 434 n y 
C16 C11 YFV sing 435 n y 
C28 C27 YFV sing 436 n n 
C28 C29 YFV sing 437 n n 
C14 C13 YFV doub 438 n y 
N30 C29 YFV sing 439 n n 
C27 N26 YFV sing 440 n n 
C29 C24 YFV sing 441 n n 
C11 C12 YFV doub 442 n y 
C13 C12 YFV sing 443 n y 
C13 N17 YFV sing 444 n n 
N26 C8 YFV sing 445 n n 
N26 C25 YFV sing 446 n n 
C24 C25 YFV sing 447 n n 
N17 C1 YFV sing 448 n n 
C8 C7 YFV sing 449 n n 
C1 C6 YFV sing 450 n y 
C1 N2 YFV doub 451 n y 
C7 C6 YFV doub 452 n y 
C7 C9 YFV sing 453 n y 
C6 N5 YFV sing 454 n y 
N2 C3 YFV sing 455 n y 
C9 C10 YFV doub 456 n y 
C3 N4 YFV doub 457 n y 
N5 C10 YFV sing 458 n y 
N5 N4 YFV sing 459 n y 
C3 H33 YFV sing 460 n n 
C8 H34 YFV sing 461 n n 
C8 H35 YFV sing 462 n n 
C9 H36 YFV sing 463 n n 
C10 H37 YFV sing 464 n n 
C11 H38 YFV sing 465 n n 
C12 H39 YFV sing 466 n n 
C14 H40 YFV sing 467 n n 
C16 H41 YFV sing 468 n n 
C23 H43 YFV sing 469 n n 
C24 H44 YFV sing 470 n n 
C24 H45 YFV sing 471 n n 
C25 H46 YFV sing 472 n n 
C25 H47 YFV sing 473 n n 
C27 H48 YFV sing 474 n n 
C27 H49 YFV sing 475 n n 
N17 H42 YFV sing 476 n n 
C28 H51 YFV sing 477 n n 
C28 H50 YFV sing 478 n n 
C29 H52 YFV sing 479 n n 
N30 H53 YFV sing 480 n n 
N30 H54 YFV sing 481 n n 
C31 H57 YFV sing 482 n n 
C31 H55 YFV sing 483 n n 
C31 H56 YFV sing 484 n n 
C32 H58 YFV sing 485 n n 
C32 H59 YFV sing 486 n n 
C32 H60 YFV sing 487 n n 
#
_atom_sites.entry_id                     7LVH 
_atom_sites.fract_transf_matrix[1][1]    0.010927 
_atom_sites.fract_transf_matrix[1][2]    0.006309 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012618 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005809 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 YFS A 1 401 4000 YFS LG1 . 
D 3 SO4 A 1 402 1 SO4 SO4 . 
E 4 YFV B 1 401 4000 YFV LG2 . 
F 3 SO4 B 1 402 2 SO4 SO4 . 
G 5 HOH A 1 501 29 HOH HOH . 
G 5 HOH A 2 502 30 HOH HOH . 
G 5 HOH A 3 503 32 HOH HOH . 
G 5 HOH A 4 504 15 HOH HOH . 
G 5 HOH A 5 505 27 HOH HOH . 
H 5 HOH B 1 501 31 HOH HOH . 
H 5 HOH B 2 502 14 HOH HOH . 
H 5 HOH B 3 503 11 HOH HOH . 
H 5 HOH B 4 504 9 HOH HOH . 
H 5 HOH B 5 505 4 HOH HOH . 
H 5 HOH B 6 506 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 YFV . . . E 4 35.151 -22.037 1.383 1 51.69 ? C1 YFV 401 B 1 
HETATM 2 C C3 YFV . . . E 4 35.655 -20.897 3.3 1 50.74 ? C3 YFV 401 B 1 
HETATM 3 C C6 YFV . . . E 4 35.515 -23.25 2.028 1 52.23 ? C6 YFV 401 B 1 
HETATM 4 C C7 YFV . . . E 4 35.584 -24.582 1.709 1 52.7 ? C7 YFV 401 B 1 
HETATM 5 C C8 YFV . . . E 4 35.379 -25.312 0.409 1 53.5 ? C8 YFV 401 B 1 
HETATM 6 C C9 YFV . . . E 4 36.001 -25.279 2.882 1 51.01 ? C9 YFV 401 B 1 
HETATM 7 C C10 YFV . . . E 4 36.209 -24.382 3.868 1 52.14 ? C10 YFV 401 B 1 
HETATM 8 C C11 YFV . . . E 4 33.234 -18.976 -1.391 1 56.75 ? C11 YFV 401 B 1 
HETATM 9 C C12 YFV . . . E 4 33.805 -19.822 -0.453 1 55.84 ? C12 YFV 401 B 1 
HETATM 10 C C14 YFV . . . E 4 33.677 -21.632 -2.02 1 57.68 ? C14 YFV 401 B 1 
HETATM 11 C C15 YFV . . . E 4 33.098 -20.788 -2.967 1 60.61 ? C15 YFV 401 B 1 
HETATM 12 C C16 YFV . . . E 4 32.875 -19.454 -2.637 1 57.94 ? C16 YFV 401 B 1 
HETATM 13 C C22 YFV . . . E 4 32.559 -22.448 -6.406 1 71.06 ? C22 YFV 401 B 1 
HETATM 14 C C23 YFV . . . E 4 32.608 -23.492 -7.469 1 70.32 ? C23 YFV 401 B 1 
HETATM 15 C C24 YFV . . . E 4 31.635 -25.163 0.022 1 55.75 ? C24 YFV 401 B 1 
HETATM 16 C C25 YFV . . . E 4 32.987 -25.558 0.602 1 57.11 ? C25 YFV 401 B 1 
HETATM 17 C C27 YFV . . . E 4 33.996 -25.592 -1.554 1 57.27 ? C27 YFV 401 B 1 
HETATM 18 N N2 YFV . . . E 4 35.231 -20.864 2.033 1 50.08 ? N2 YFV 401 B 1 
HETATM 19 N N4 YFV . . . E 4 36.039 -21.95 4.054 1 50.34 ? N4 YFV 401 B 1 
HETATM 20 N N5 YFV . . . E 4 35.927 -23.126 3.349 1 51.78 ? N5 YFV 401 B 1 
HETATM 21 C C13 YFV . . . E 4 34.036 -21.158 -0.766 1 54.51 ? C13 YFV 401 B 1 
HETATM 22 N N17 YFV . . . E 4 34.785 -22.037 0.061 1 53.2 ? N17 YFV 401 B 1 
HETATM 23 S S18 YFV . . . E 4 32.837 -22.957 -4.755 1 71.4 ? S18 YFV 401 B 1 
HETATM 24 C C19 YFV . . . E 4 32.811 -21.273 -4.33 1 66.96 ? C19 YFV 401 B 1 
HETATM 25 N N20 YFV . . . E 4 32.59 -20.484 -5.339 1 69.35 ? N20 YFV 401 B 1 
HETATM 26 N N21 YFV . . . E 4 32.439 -21.17 -6.545 1 70.54 ? N21 YFV 401 B 1 
HETATM 27 N N26 YFV . . . E 4 34.082 -25.016 -0.203 1 56.39 ? N26 YFV 401 B 1 
HETATM 28 C C28 YFV . . . E 4 32.667 -25.244 -2.227 1 55.25 ? C28 YFV 401 B 1 
HETATM 29 C C29 YFV . . . E 4 31.481 -25.696 -1.392 1 53.17 ? C29 YFV 401 B 1 
HETATM 30 N N30 YFV . . . E 4 30.232 -25.205 -1.981 1 53.46 ? N30 YFV 401 B 1 
HETATM 31 C C31 YFV . . . E 4 34.054 -23.559 -7.884 1 67.32 ? C31 YFV 401 B 1 
HETATM 32 C C32 YFV . . . E 4 31.675 -23.198 -8.652 1 72.07 ? C32 YFV 401 B 1 
HETATM 33 H H33 YFV . . . E 4 35.649 -19.937 3.814 1 51 ? H33 YFV 401 B 1 
HETATM 34 H H34 YFV . . . E 4 36.203 -25.043 -0.249 1 53.42 ? H34 YFV 401 B 1 
HETATM 35 H H35 YFV . . . E 4 35.551 -26.368 0.613 1 53.04 ? H35 YFV 401 B 1 
HETATM 36 H H36 YFV . . . E 4 36.116 -26.358 2.967 1 50.64 ? H36 YFV 401 B 1 
HETATM 37 H H37 YFV . . . E 4 36.536 -24.522 4.897 1 52.08 ? H37 YFV 401 B 1 
HETATM 38 H H38 YFV . . . E 4 33.077 -17.921 -1.174 1 56.56 ? H38 YFV 401 B 1 
HETATM 39 H H39 YFV . . . E 4 34.076 -19.39 0.507 1 56.05 ? H39 YFV 401 B 1 
HETATM 40 H H40 YFV . . . E 4 33.932 -22.656 -2.274 1 58.14 ? H40 YFV 401 B 1 
HETATM 41 H H41 YFV . . . E 4 32.421 -18.762 -3.344 1 57.63 ? H41 YFV 401 B 1 
HETATM 42 H H43 YFV . . . E 4 32.319 -24.445 -7.028 1 69.98 ? H43 YFV 401 B 1 
HETATM 43 H H44 YFV . . . E 4 30.847 -25.541 0.67 1 55.98 ? H44 YFV 401 B 1 
HETATM 44 H H45 YFV . . . E 4 31.512 -24.082 0.058 1 55.86 ? H45 YFV 401 B 1 
HETATM 45 H H46 YFV . . . E 4 33.029 -25.167 1.615 1 57.3 ? H46 YFV 401 B 1 
HETATM 46 H H47 YFV . . . E 4 33.031 -26.639 0.707 1 57.14 ? H47 YFV 401 B 1 
HETATM 47 H H48 YFV . . . E 4 34.792 -25.163 -2.16 1 57.25 ? H48 YFV 401 B 1 
HETATM 48 H H49 YFV . . . E 4 34.169 -26.666 -1.596 1 57.46 ? H49 YFV 401 B 1 
HETATM 49 H H42 YFV . . . E 4 35.246 -22.777 -0.459 1 53.25 ? H42 YFV 401 B 1 
HETATM 50 H H51 YFV . . . E 4 32.658 -25.672 -3.228 1 55.33 ? H51 YFV 401 B 1 
HETATM 51 H H50 YFV . . . E 4 32.592 -24.171 -2.382 1 55.5 ? H50 YFV 401 B 1 
HETATM 52 H H52 YFV . . . E 4 31.42 -26.782 -1.371 1 52.96 ? H52 YFV 401 B 1 
HETATM 53 H H53 YFV . . . E 4 30.311 -24.322 -2.476 1 53.36 ? H53 YFV 401 B 1 
HETATM 54 H H54 YFV . . . E 4 29.458 -25.149 -1.327 1 53.8 ? H54 YFV 401 B 1 
HETATM 55 H H57 YFV . . . E 4 34.346 -22.717 -8.51 1 67.16 ? H57 YFV 401 B 1 
HETATM 56 H H55 YFV . . . E 4 34.232 -24.46 -8.464 1 67.38 ? H55 YFV 401 B 1 
HETATM 57 H H56 YFV . . . E 4 34.74 -23.577 -7.039 1 66.82 ? H56 YFV 401 B 1 
HETATM 58 H H58 YFV . . . E 4 31.968 -22.289 -9.177 1 72.35 ? H58 YFV 401 B 1 
HETATM 59 H H59 YFV . . . E 4 30.64 -23.061 -8.343 1 72.04 ? H59 YFV 401 B 1 
HETATM 60 H H60 YFV . . . E 4 31.674 -23.996 -9.392 1 71.91 ? H60 YFV 401 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           60 
#