data_7LWF # _model_server_result.job_id pssjNE85kuEKGAjUimNp8A _model_server_result.datetime_utc '2025-08-31 08:51:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lwf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7LWF # _exptl.entry_id 7LWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 434.835 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-chloropyridin-4-yl)-2-[5-(3-cyano-4-hydroxyphenyl)-3-methyl-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.307 _cell.angle_gamma 90 _cell.entry_id 7LWF _cell.length_a 30.473 _cell.length_b 72.42 _cell.length_c 55.592 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 15.609342 0 -53.355589 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H15 Cl N6 O3' _chem_comp.formula_weight 434.835 _chem_comp.id YNA _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-chloropyridin-4-yl)-2-[5-(3-cyano-4-hydroxyphenyl)-3-methyl-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL06 C05 YNA sing 361 n n C07 N08 YNA doub 362 n y C07 C05 YNA sing 363 n y N08 C09 YNA sing 364 n y C05 C04 YNA doub 365 n y C09 C10 YNA doub 366 n y C04 C10 YNA sing 367 n y C04 N03 YNA sing 368 n n C22 C23 YNA doub 369 n y C22 C20 YNA sing 370 n y N03 C02 YNA sing 371 n n C23 C15 YNA sing 372 n y O21 C20 YNA sing 373 n n C20 C17 YNA doub 374 n y C02 O01 YNA doub 375 n n C02 C11 YNA sing 376 n n C13 N12 YNA sing 377 n y C13 C14 YNA doub 378 n y C15 C14 YNA sing 379 n n C15 C16 YNA doub 380 n y C11 N12 YNA sing 381 n n C17 C16 YNA sing 382 n y C17 C18 YNA sing 383 n n N12 C24 YNA sing 384 n y C14 C25 YNA sing 385 n y C18 N19 YNA trip 386 n n C24 C25 YNA doub 387 n y C24 N30 YNA sing 388 n n C25 C26 YNA sing 389 n n N30 C29 YNA doub 390 n n C26 O31 YNA doub 391 n n C26 N27 YNA sing 392 n n C29 N27 YNA sing 393 n n N27 C28 YNA sing 394 n n C28 H282 YNA sing 395 n n C28 H283 YNA sing 396 n n C28 H281 YNA sing 397 n n C29 H291 YNA sing 398 n n C23 H231 YNA sing 399 n n C22 H221 YNA sing 400 n n C16 H161 YNA sing 401 n n C13 H131 YNA sing 402 n n C11 H112 YNA sing 403 n n C11 H111 YNA sing 404 n n C07 H071 YNA sing 405 n n C09 H091 YNA sing 406 n n C10 H101 YNA sing 407 n n N03 H1 YNA sing 408 n n O21 H211 YNA sing 409 n n # _atom_sites.entry_id 7LWF _atom_sites.fract_transf_matrix[1][1] 0.032816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0096 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YNA A 1 201 201 YNA YNA . C 3 GOL A 1 202 202 GOL GOL . D 4 HOH A 1 301 412 HOH HOH . D 4 HOH A 2 302 368 HOH HOH . D 4 HOH A 3 303 433 HOH HOH . D 4 HOH A 4 304 337 HOH HOH . D 4 HOH A 5 305 386 HOH HOH . D 4 HOH A 6 306 382 HOH HOH . D 4 HOH A 7 307 395 HOH HOH . D 4 HOH A 8 308 328 HOH HOH . D 4 HOH A 9 309 389 HOH HOH . D 4 HOH A 10 310 407 HOH HOH . D 4 HOH A 11 311 410 HOH HOH . D 4 HOH A 12 312 313 HOH HOH . D 4 HOH A 13 313 335 HOH HOH . D 4 HOH A 14 314 380 HOH HOH . D 4 HOH A 15 315 361 HOH HOH . D 4 HOH A 16 316 343 HOH HOH . D 4 HOH A 17 317 303 HOH HOH . D 4 HOH A 18 318 322 HOH HOH . D 4 HOH A 19 319 403 HOH HOH . D 4 HOH A 20 320 419 HOH HOH . D 4 HOH A 21 321 421 HOH HOH . D 4 HOH A 22 322 339 HOH HOH . D 4 HOH A 23 323 381 HOH HOH . D 4 HOH A 24 324 354 HOH HOH . D 4 HOH A 25 325 334 HOH HOH . D 4 HOH A 26 326 409 HOH HOH . D 4 HOH A 27 327 414 HOH HOH . D 4 HOH A 28 328 308 HOH HOH . D 4 HOH A 29 329 388 HOH HOH . D 4 HOH A 30 330 323 HOH HOH . D 4 HOH A 31 331 320 HOH HOH . D 4 HOH A 32 332 345 HOH HOH . D 4 HOH A 33 333 362 HOH HOH . D 4 HOH A 34 334 363 HOH HOH . D 4 HOH A 35 335 304 HOH HOH . D 4 HOH A 36 336 327 HOH HOH . D 4 HOH A 37 337 314 HOH HOH . D 4 HOH A 38 338 357 HOH HOH . D 4 HOH A 39 339 423 HOH HOH . D 4 HOH A 40 340 310 HOH HOH . D 4 HOH A 41 341 311 HOH HOH . D 4 HOH A 42 342 372 HOH HOH . D 4 HOH A 43 343 428 HOH HOH . D 4 HOH A 44 344 312 HOH HOH . D 4 HOH A 45 345 301 HOH HOH . D 4 HOH A 46 346 307 HOH HOH . D 4 HOH A 47 347 391 HOH HOH . D 4 HOH A 48 348 367 HOH HOH . D 4 HOH A 49 349 374 HOH HOH . D 4 HOH A 50 350 330 HOH HOH . D 4 HOH A 51 351 353 HOH HOH . D 4 HOH A 52 352 319 HOH HOH . D 4 HOH A 53 353 430 HOH HOH . D 4 HOH A 54 354 352 HOH HOH . D 4 HOH A 55 355 340 HOH HOH . D 4 HOH A 56 356 408 HOH HOH . D 4 HOH A 57 357 369 HOH HOH . D 4 HOH A 58 358 371 HOH HOH . D 4 HOH A 59 359 333 HOH HOH . D 4 HOH A 60 360 324 HOH HOH . D 4 HOH A 61 361 418 HOH HOH . D 4 HOH A 62 362 420 HOH HOH . D 4 HOH A 63 363 415 HOH HOH . D 4 HOH A 64 364 325 HOH HOH . D 4 HOH A 65 365 373 HOH HOH . D 4 HOH A 66 366 346 HOH HOH . D 4 HOH A 67 367 401 HOH HOH . D 4 HOH A 68 368 347 HOH HOH . D 4 HOH A 69 369 302 HOH HOH . D 4 HOH A 70 370 309 HOH HOH . D 4 HOH A 71 371 306 HOH HOH . D 4 HOH A 72 372 432 HOH HOH . D 4 HOH A 73 373 305 HOH HOH . D 4 HOH A 74 374 405 HOH HOH . D 4 HOH A 75 375 315 HOH HOH . D 4 HOH A 76 376 375 HOH HOH . D 4 HOH A 77 377 355 HOH HOH . D 4 HOH A 78 378 329 HOH HOH . D 4 HOH A 79 379 332 HOH HOH . D 4 HOH A 80 380 359 HOH HOH . D 4 HOH A 81 381 341 HOH HOH . D 4 HOH A 82 382 358 HOH HOH . D 4 HOH A 83 383 321 HOH HOH . D 4 HOH A 84 384 376 HOH HOH . D 4 HOH A 85 385 384 HOH HOH . D 4 HOH A 86 386 365 HOH HOH . D 4 HOH A 87 387 338 HOH HOH . D 4 HOH A 88 388 351 HOH HOH . D 4 HOH A 89 389 316 HOH HOH . D 4 HOH A 90 390 383 HOH HOH . D 4 HOH A 91 391 349 HOH HOH . D 4 HOH A 92 392 326 HOH HOH . D 4 HOH A 93 393 364 HOH HOH . D 4 HOH A 94 394 350 HOH HOH . D 4 HOH A 95 395 344 HOH HOH . D 4 HOH A 96 396 331 HOH HOH . D 4 HOH A 97 397 356 HOH HOH . D 4 HOH A 98 398 360 HOH HOH . D 4 HOH A 99 399 317 HOH HOH . D 4 HOH A 100 400 427 HOH HOH . D 4 HOH A 101 401 431 HOH HOH . D 4 HOH A 102 402 377 HOH HOH . D 4 HOH A 103 403 385 HOH HOH . D 4 HOH A 104 404 348 HOH HOH . D 4 HOH A 105 405 378 HOH HOH . D 4 HOH A 106 406 370 HOH HOH . D 4 HOH A 107 407 434 HOH HOH . D 4 HOH A 108 408 425 HOH HOH . D 4 HOH A 109 409 413 HOH HOH . D 4 HOH A 110 410 366 HOH HOH . D 4 HOH A 111 411 411 HOH HOH . D 4 HOH A 112 412 398 HOH HOH . D 4 HOH A 113 413 394 HOH HOH . D 4 HOH A 114 414 387 HOH HOH . D 4 HOH A 115 415 400 HOH HOH . D 4 HOH A 116 416 429 HOH HOH . D 4 HOH A 117 417 397 HOH HOH . D 4 HOH A 118 418 406 HOH HOH . D 4 HOH A 119 419 379 HOH HOH . D 4 HOH A 120 420 336 HOH HOH . D 4 HOH A 121 421 426 HOH HOH . D 4 HOH A 122 422 390 HOH HOH . D 4 HOH A 123 423 417 HOH HOH . D 4 HOH A 124 424 416 HOH HOH . D 4 HOH A 125 425 435 HOH HOH . D 4 HOH A 126 426 399 HOH HOH . D 4 HOH A 127 427 436 HOH HOH . D 4 HOH A 128 428 404 HOH HOH . D 4 HOH A 129 429 422 HOH HOH . D 4 HOH A 130 430 392 HOH HOH . D 4 HOH A 131 431 318 HOH HOH . D 4 HOH A 132 432 396 HOH HOH . D 4 HOH A 133 433 393 HOH HOH . D 4 HOH A 134 434 402 HOH HOH . D 4 HOH A 135 435 342 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C28 YNA . . . B 2 4.082 0.756 -43.948 1 18.18 ? C28 YNA 201 A 1 HETATM 2 C C29 YNA . . . B 2 3.317 -1.077 -42.529 1 18.06 ? C29 YNA 201 A 1 HETATM 3 C C26 YNA . . . B 2 4.763 0.688 -41.575 1 17.34 ? C26 YNA 201 A 1 HETATM 4 C C23 YNA . . . B 2 6.063 1.545 -37.061 1 17 ? C23 YNA 201 A 1 HETATM 5 C C22 YNA . . . B 2 6.929 2.483 -36.545 1 17.36 ? C22 YNA 201 A 1 HETATM 6 C C14 YNA . . . B 2 5.206 0.163 -38.95 1 16.04 ? C14 YNA 201 A 1 HETATM 7 C C15 YNA . . . B 2 6.115 1.232 -38.4 1 15.93 ? C15 YNA 201 A 1 HETATM 8 C C16 YNA . . . B 2 7.038 1.792 -39.216 1 16.12 ? C16 YNA 201 A 1 HETATM 9 C C13 YNA . . . B 2 4.764 -0.91 -38.181 1 16.68 ? C13 YNA 201 A 1 HETATM 10 C C11 YNA . . . B 2 3.405 -2.898 -38.49 1 16.91 ? C11 YNA 201 A 1 HETATM 11 C C02 YNA . . . B 2 2.053 -2.739 -37.883 1 16.7 ? C02 YNA 201 A 1 HETATM 12 C C04 YNA . . . B 2 0.542 -3.946 -36.225 1 16.99 ? C04 YNA 201 A 1 HETATM 13 C C05 YNA . . . B 2 0.537 -4.62 -35.025 1 15.97 ? C05 YNA 201 A 1 HETATM 14 C C07 YNA . . . B 2 -0.688 -4.877 -34.404 1 17.74 ? C07 YNA 201 A 1 HETATM 15 C C09 YNA . . . B 2 -1.854 -3.892 -36.165 1 19.87 ? C09 YNA 201 A 1 HETATM 16 C C10 YNA . . . B 2 -0.667 -3.601 -36.841 1 18.84 ? C10 YNA 201 A 1 HETATM 17 C C17 YNA . . . B 2 7.898 2.735 -38.703 1 16.4 ? C17 YNA 201 A 1 HETATM 18 C C18 YNA . . . B 2 8.878 3.351 -39.637 1 15.58 ? C18 YNA 201 A 1 HETATM 19 C C20 YNA . . . B 2 7.853 3.077 -37.373 1 17.44 ? C20 YNA 201 A 1 HETATM 20 C C24 YNA . . . B 2 3.97 -1.197 -40.168 1 16.52 ? C24 YNA 201 A 1 HETATM 21 C C25 YNA . . . B 2 4.697 -0.041 -40.264 1 16.63 ? C25 YNA 201 A 1 HETATM 22 N N03 YNA . . . B 2 1.787 -3.755 -36.891 1 16.4 ? N03 YNA 201 A 1 HETATM 23 N N08 YNA . . . B 2 -1.844 -4.522 -34.975 1 19.03 ? N08 YNA 201 A 1 HETATM 24 N N12 YNA . . . B 2 4.022 -1.677 -38.938 1 15.81 ? N12 YNA 201 A 1 HETATM 25 N N19 YNA . . . B 2 9.598 3.781 -40.356 1 17.09 ? N19 YNA 201 A 1 HETATM 26 N N27 YNA . . . B 2 4.065 0.122 -42.65 1 17.95 ? N27 YNA 201 A 1 HETATM 27 N N30 YNA . . . B 2 3.241 -1.764 -41.286 1 17.83 ? N30 YNA 201 A 1 HETATM 28 O O01 YNA . . . B 2 1.262 -1.877 -38.178 1 18.49 ? O01 YNA 201 A 1 HETATM 29 O O21 YNA . . . B 2 8.748 4.036 -36.871 1 18.06 ? O21 YNA 201 A 1 HETATM 30 O O31 YNA . . . B 2 5.39 1.681 -41.712 1 17.66 ? O31 YNA 201 A 1 HETATM 31 CL CL06 YNA . . . B 2 2.039 -5.097 -34.296 1 16.32 ? CL06 YNA 201 A 1 HETATM 32 H H282 YNA . . . B 2 5.013 0.931 -44.216 1 21.84 ? H282 YNA 201 A 1 HETATM 33 H H283 YNA . . . B 2 3.585 1.611 -43.905 1 21.84 ? H283 YNA 201 A 1 HETATM 34 H H281 YNA . . . B 2 3.657 0.162 -44.609 1 21.84 ? H281 YNA 201 A 1 HETATM 35 H H291 YNA . . . B 2 2.842 -1.436 -43.313 1 21.71 ? H291 YNA 201 A 1 HETATM 36 H H231 YNA . . . B 2 5.409 1.116 -36.484 1 20.43 ? H231 YNA 201 A 1 HETATM 37 H H221 YNA . . . B 2 6.886 2.724 -35.608 1 20.86 ? H221 YNA 201 A 1 HETATM 38 H H161 YNA . . . B 2 7.079 1.548 -40.158 1 19.37 ? H161 YNA 201 A 1 HETATM 39 H H131 YNA . . . B 2 4.965 -1.059 -37.232 1 20.04 ? H131 YNA 201 A 1 HETATM 40 H H112 YNA . . . B 2 3.327 -3.508 -39.263 1 20.32 ? H112 YNA 201 A 1 HETATM 41 H H111 YNA . . . B 2 3.999 -3.318 -37.82 1 20.32 ? H111 YNA 201 A 1 HETATM 42 H H071 YNA . . . B 2 -0.701 -5.339 -33.517 1 21.32 ? H071 YNA 201 A 1 HETATM 43 H H091 YNA . . . B 2 -2.711 -3.628 -36.562 1 23.87 ? H091 YNA 201 A 1 HETATM 44 H H101 YNA . . . B 2 -0.68 -3.14 -37.724 1 22.63 ? H101 YNA 201 A 1 HETATM 45 H H211 YNA . . . B 2 8.503 4.844 -37.149 1 21.7 ? H211 YNA 201 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 45 #