data_7LZ4 # _model_server_result.job_id 1lPJMCprOT5XKTY2lC1C6A _model_server_result.datetime_utc '2025-08-28 22:44:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7lz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":402}' # _entry.id 7LZ4 # _exptl.entry_id 7LZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7LZ4 _cell.length_a 176.786 _cell.length_b 176.786 _cell.length_c 345.503 _cell.Z_PDB 72 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J 1 1 B,K,L 2 1 C,M,N 3 1 D,O,P 4 1 E,Q,R 5 1 F,S,T 6 1 G,U,V 7 1 H,W,X 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 7LZ4 _atom_sites.fract_transf_matrix[1][1] 0.005657 _atom_sites.fract_transf_matrix[1][2] 0.003266 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 CMP A 1 401 401 CMP CMP . J 2 CMP A 1 402 601 CMP CMP . K 2 CMP B 1 401 401 CMP CMP . L 2 CMP B 1 402 601 CMP CMP . M 2 CMP C 1 401 401 CMP CMP . N 2 CMP C 1 402 601 CMP CMP . O 2 CMP D 1 401 401 CMP CMP . P 2 CMP D 1 402 601 CMP CMP . Q 2 CMP E 1 401 401 CMP CMP . R 2 CMP E 1 402 601 CMP CMP . S 2 CMP F 1 401 401 CMP CMP . T 2 CMP F 1 402 601 CMP CMP . U 2 CMP G 1 401 401 CMP CMP . V 2 CMP G 1 402 601 CMP CMP . W 2 CMP H 1 401 401 CMP CMP . X 2 CMP H 1 402 601 CMP CMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . X 2 -47.945 -40.417 -17.362 1 142.08 ? P CMP 402 H 1 HETATM 2 O O1P CMP . . . X 2 -48.274 -40.595 -18.825 1 106.15 ? O1P CMP 402 H 1 HETATM 3 O O2P CMP . . . X 2 -47.566 -39.037 -16.874 1 139.42 ? O2P CMP 402 H 1 HETATM 4 O O5' CMP . . . X 2 -49.159 -41.014 -16.455 1 101.29 ? O5' CMP 402 H 1 HETATM 5 C C5' CMP . . . X 2 -48.928 -41.964 -15.418 1 84.56 ? C5' CMP 402 H 1 HETATM 6 C C4' CMP . . . X 2 -47.472 -42.02 -15.1 1 122.72 ? C4' CMP 402 H 1 HETATM 7 O O4' CMP . . . X 2 -47.161 -43.098 -14.211 1 112.75 ? O4' CMP 402 H 1 HETATM 8 C C3' CMP . . . X 2 -46.573 -42.303 -16.272 1 129.06 ? C3' CMP 402 H 1 HETATM 9 O O3' CMP . . . X 2 -46.519 -41.219 -17.164 1 98.15 ? O3' CMP 402 H 1 HETATM 10 C C2' CMP . . . X 2 -45.262 -42.618 -15.579 1 122.39 ? C2' CMP 402 H 1 HETATM 11 O O2' CMP . . . X 2 -44.629 -41.426 -15.199 1 81.95 ? O2' CMP 402 H 1 HETATM 12 C C1' CMP . . . X 2 -45.764 -43.315 -14.297 1 138.83 ? C1' CMP 402 H 1 HETATM 13 N N9 CMP . . . X 2 -45.476 -44.766 -14.274 1 165.34 ? N9 CMP 402 H 1 HETATM 14 C C8 CMP . . . X 2 -45.114 -45.44 -13.159 1 159.11 ? C8 CMP 402 H 1 HETATM 15 N N7 CMP . . . X 2 -44.891 -46.751 -13.412 1 143.8 ? N7 CMP 402 H 1 HETATM 16 C C5 CMP . . . X 2 -45.109 -46.932 -14.73 1 142.15 ? C5 CMP 402 H 1 HETATM 17 C C6 CMP . . . X 2 -45.049 -48.076 -15.661 1 164.59 ? C6 CMP 402 H 1 HETATM 18 N N6 CMP . . . X 2 -44.712 -49.319 -15.244 1 200.27 ? N6 CMP 402 H 1 HETATM 19 N N1 CMP . . . X 2 -45.347 -47.854 -16.945 1 166.9 ? N1 CMP 402 H 1 HETATM 20 C C2 CMP . . . X 2 -45.679 -46.634 -17.373 1 156.73 ? C2 CMP 402 H 1 HETATM 21 N N3 CMP . . . X 2 -45.744 -45.547 -16.602 1 157.88 ? N3 CMP 402 H 1 HETATM 22 C C4 CMP . . . X 2 -45.482 -45.628 -15.289 1 156.61 ? C4 CMP 402 H 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #