data_7M03
#
_model_server_result.job_id            hg5TlXwsR2XtmCvQirGj1A 
_model_server_result.datetime_utc      '2024-10-20 00:44:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7m03 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    7M03 
#
_exptl.entry_id    7M03 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              503.542 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S,2S)-2-((S)-2-((((3-fluorobenzyl)oxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.4 
_cell.angle_gamma         90 
_cell.entry_id            7M03 
_cell.length_a            55.022 
_cell.length_b            98.612 
_cell.length_c            58.339 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7M03 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 149 A CYS 145 1_555 C C19 YLD . A YLD 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.803 ? 
covale ? covale2 A SG CYS 149 A CYS 145 1_555 D C19 YLJ . A YLJ 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.812 ? 
covale ? covale3 B SG CYS 149 B CYS 145 1_555 E C19 YLJ . B YLJ 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.815 ? 
covale ? covale4 B SG CYS 149 B CYS 145 1_555 F C19 YLD . B YLD 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.804 ? 
#
_chem_comp.formula           'C21 H30 F N3 O8 S' 
_chem_comp.formula_weight    503.542 
_chem_comp.id                YLJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S,2S)-2-((S)-2-((((3-fluorobenzyl)oxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O18 C14 YLJ doub 441 n n 
C29 C30 YLJ doub 442 n y 
C29 C28 YLJ sing 443 n y 
C30 C24 YLJ sing 444 n y 
C28 C26 YLJ doub 445 n y 
C24 C23 YLJ sing 446 n n 
C24 C25 YLJ doub 447 n y 
C23 O22 YLJ sing 448 n n 
C14 N15 YLJ sing 449 n n 
C14 C13 YLJ sing 450 n n 
N15 C16 YLJ sing 451 n n 
C26 C25 YLJ sing 452 n y 
C26 F27 YLJ sing 453 n n 
O01 C02 YLJ doub 454 n n 
O22 C02 YLJ sing 455 n n 
C13 C12 YLJ sing 456 n n 
C13 C17 YLJ sing 457 n n 
C02 N03 YLJ sing 458 n n 
C16 C17 YLJ sing 459 n n 
C08 C06 YLJ sing 460 n n 
N03 C04 YLJ sing 461 n n 
C12 C11 YLJ sing 462 n n 
C04 C09 YLJ sing 463 n n 
C04 C05 YLJ sing 464 n n 
N10 C09 YLJ sing 465 n n 
N10 C11 YLJ sing 466 n n 
C09 O21 YLJ doub 467 n n 
C06 C05 YLJ sing 468 n n 
C06 C07 YLJ sing 469 n n 
C11 C19 YLJ sing 470 n n 
C19 O20 YLJ sing 471 n n 
C11 H1 YLJ sing 472 n n 
C16 H2 YLJ sing 473 n n 
C17 H3 YLJ sing 474 n n 
C17 H4 YLJ sing 475 n n 
C23 H5 YLJ sing 476 n n 
C23 H6 YLJ sing 477 n n 
C29 H7 YLJ sing 478 n n 
C28 H8 YLJ sing 479 n n 
C25 H9 YLJ sing 480 n n 
C04 H10 YLJ sing 481 n n 
C05 H11 YLJ sing 482 n n 
C05 H12 YLJ sing 483 n n 
C06 H13 YLJ sing 484 n n 
C07 H14 YLJ sing 485 n n 
C07 H15 YLJ sing 486 n n 
C07 H16 YLJ sing 487 n n 
C08 H17 YLJ sing 488 n n 
C08 H18 YLJ sing 489 n n 
C08 H19 YLJ sing 490 n n 
C12 H20 YLJ sing 491 n n 
C12 H21 YLJ sing 492 n n 
C13 H22 YLJ sing 493 n n 
C19 H23 YLJ sing 494 n n 
C19 S1 YLJ sing 495 n n 
C30 H25 YLJ sing 496 n n 
N03 H26 YLJ sing 497 n n 
N10 H27 YLJ sing 498 n n 
O20 H28 YLJ sing 499 n n 
S1 O1 YLJ doub 500 n n 
S1 O2 YLJ doub 501 n n 
S1 O3 YLJ sing 502 n n 
C16 H24 YLJ sing 503 n n 
N15 H29 YLJ sing 504 n n 
O3 H30 YLJ sing 505 n n 
#
_atom_sites.entry_id                     7M03 
_atom_sites.fract_transf_matrix[1][1]    0.018175 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005697 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010141 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017963 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 YLD A 1 401 1 YLD R29 . 
D 3 YLJ A 1 402 2 YLJ S29 . 
E 3 YLJ B 1 401 3 YLJ S29 . 
F 2 YLD B 1 402 4 YLD R29 . 
G 4 HOH A 1 501 73 HOH HOH . 
G 4 HOH A 2 502 79 HOH HOH . 
G 4 HOH A 3 503 50 HOH HOH . 
G 4 HOH A 4 504 93 HOH HOH . 
G 4 HOH A 5 505 94 HOH HOH . 
G 4 HOH A 6 506 62 HOH HOH . 
G 4 HOH A 7 507 55 HOH HOH . 
G 4 HOH A 8 508 54 HOH HOH . 
G 4 HOH A 9 509 104 HOH HOH . 
G 4 HOH A 10 510 3 HOH HOH . 
G 4 HOH A 11 511 91 HOH HOH . 
G 4 HOH A 12 512 57 HOH HOH . 
G 4 HOH A 13 513 35 HOH HOH . 
G 4 HOH A 14 514 32 HOH HOH . 
G 4 HOH A 15 515 47 HOH HOH . 
G 4 HOH A 16 516 89 HOH HOH . 
G 4 HOH A 17 517 6 HOH HOH . 
G 4 HOH A 18 518 27 HOH HOH . 
G 4 HOH A 19 519 51 HOH HOH . 
G 4 HOH A 20 520 102 HOH HOH . 
G 4 HOH A 21 521 71 HOH HOH . 
G 4 HOH A 22 522 45 HOH HOH . 
G 4 HOH A 23 523 43 HOH HOH . 
G 4 HOH A 24 524 90 HOH HOH . 
G 4 HOH A 25 525 64 HOH HOH . 
G 4 HOH A 26 526 13 HOH HOH . 
G 4 HOH A 27 527 44 HOH HOH . 
G 4 HOH A 28 528 2 HOH HOH . 
G 4 HOH A 29 529 30 HOH HOH . 
G 4 HOH A 30 530 100 HOH HOH . 
G 4 HOH A 31 531 84 HOH HOH . 
G 4 HOH A 32 532 68 HOH HOH . 
G 4 HOH A 33 533 61 HOH HOH . 
G 4 HOH A 34 534 29 HOH HOH . 
G 4 HOH A 35 535 15 HOH HOH . 
G 4 HOH A 36 536 22 HOH HOH . 
G 4 HOH A 37 537 60 HOH HOH . 
G 4 HOH A 38 538 87 HOH HOH . 
G 4 HOH A 39 539 34 HOH HOH . 
G 4 HOH A 40 540 56 HOH HOH . 
G 4 HOH A 41 541 41 HOH HOH . 
G 4 HOH A 42 542 81 HOH HOH . 
G 4 HOH A 43 543 12 HOH HOH . 
G 4 HOH A 44 544 16 HOH HOH . 
G 4 HOH A 45 545 52 HOH HOH . 
G 4 HOH A 46 546 18 HOH HOH . 
G 4 HOH A 47 547 92 HOH HOH . 
G 4 HOH A 48 548 59 HOH HOH . 
G 4 HOH A 49 549 77 HOH HOH . 
G 4 HOH A 50 550 65 HOH HOH . 
H 4 HOH B 1 501 101 HOH HOH . 
H 4 HOH B 2 502 98 HOH HOH . 
H 4 HOH B 3 503 25 HOH HOH . 
H 4 HOH B 4 504 72 HOH HOH . 
H 4 HOH B 5 505 20 HOH HOH . 
H 4 HOH B 6 506 99 HOH HOH . 
H 4 HOH B 7 507 103 HOH HOH . 
H 4 HOH B 8 508 4 HOH HOH . 
H 4 HOH B 9 509 36 HOH HOH . 
H 4 HOH B 10 510 21 HOH HOH . 
H 4 HOH B 11 511 7 HOH HOH . 
H 4 HOH B 12 512 58 HOH HOH . 
H 4 HOH B 13 513 19 HOH HOH . 
H 4 HOH B 14 514 88 HOH HOH . 
H 4 HOH B 15 515 70 HOH HOH . 
H 4 HOH B 16 516 26 HOH HOH . 
H 4 HOH B 17 517 23 HOH HOH . 
H 4 HOH B 18 518 96 HOH HOH . 
H 4 HOH B 19 519 9 HOH HOH . 
H 4 HOH B 20 520 46 HOH HOH . 
H 4 HOH B 21 521 40 HOH HOH . 
H 4 HOH B 22 522 5 HOH HOH . 
H 4 HOH B 23 523 76 HOH HOH . 
H 4 HOH B 24 524 78 HOH HOH . 
H 4 HOH B 25 525 95 HOH HOH . 
H 4 HOH B 26 526 66 HOH HOH . 
H 4 HOH B 27 527 53 HOH HOH . 
H 4 HOH B 28 528 42 HOH HOH . 
H 4 HOH B 29 529 31 HOH HOH . 
H 4 HOH B 30 530 48 HOH HOH . 
H 4 HOH B 31 531 86 HOH HOH . 
H 4 HOH B 32 532 17 HOH HOH . 
H 4 HOH B 33 533 49 HOH HOH . 
H 4 HOH B 34 534 24 HOH HOH . 
H 4 HOH B 35 535 8 HOH HOH . 
H 4 HOH B 36 536 1 HOH HOH . 
H 4 HOH B 37 537 97 HOH HOH . 
H 4 HOH B 38 538 39 HOH HOH . 
H 4 HOH B 39 539 83 HOH HOH . 
H 4 HOH B 40 540 28 HOH HOH . 
H 4 HOH B 41 541 11 HOH HOH . 
H 4 HOH B 42 542 75 HOH HOH . 
H 4 HOH B 43 543 74 HOH HOH . 
H 4 HOH B 44 544 80 HOH HOH . 
H 4 HOH B 45 545 67 HOH HOH . 
H 4 HOH B 46 546 33 HOH HOH . 
H 4 HOH B 47 547 105 HOH HOH . 
H 4 HOH B 48 548 37 HOH HOH . 
H 4 HOH B 49 549 10 HOH HOH . 
H 4 HOH B 50 550 63 HOH HOH . 
H 4 HOH B 51 551 69 HOH HOH . 
H 4 HOH B 52 552 82 HOH HOH . 
H 4 HOH B 53 553 14 HOH HOH . 
H 4 HOH B 54 554 85 HOH HOH . 
H 4 HOH B 55 555 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 YLJ . A . E 3 -17.212 -5.878 4.966 0.5 46.1 ? C11 YLJ 401 B 1 
HETATM 2 C C16 YLJ . A . E 3 -15.083 -3.396 2.051 0.5 58.73 ? C16 YLJ 401 B 1 
HETATM 3 C C17 YLJ . A . E 3 -16.421 -4.085 2.441 0.5 53.3 ? C17 YLJ 401 B 1 
HETATM 4 O O18 YLJ . A . E 3 -16.367 -1.199 4.466 0.5 49.2 ? O18 YLJ 401 B 1 
HETATM 5 C C23 YLJ . A . E 3 -22.316 -2.749 0.139 0.5 56.35 ? C23 YLJ 401 B 1 
HETATM 6 C C02 YLJ . A . E 3 -20.804 -3.856 1.845 0.5 53.51 ? C02 YLJ 401 B 1 
HETATM 7 C C04 YLJ . A . E 3 -20.99 -5.768 3.515 0.5 43.77 ? C04 YLJ 401 B 1 
HETATM 8 C C05 YLJ . A . E 3 -21.685 -7.124 3.841 0.5 43.13 ? C05 YLJ 401 B 1 
HETATM 9 C C06 YLJ . A . E 3 -23.226 -7.087 4.033 0.5 47.16 ? C06 YLJ 401 B 1 
HETATM 10 C C07 YLJ . A . E 3 -23.843 -8.435 4.442 0.5 50.19 ? C07 YLJ 401 B 1 
HETATM 11 C C08 YLJ . A . E 3 -23.621 -6.003 5.04 0.5 51.67 ? C08 YLJ 401 B 1 
HETATM 12 C C09 YLJ . A . E 3 -19.452 -5.99 3.712 0.5 46.26 ? C09 YLJ 401 B 1 
HETATM 13 C C12 YLJ . A . E 3 -16.372 -4.515 4.908 0.5 47.96 ? C12 YLJ 401 B 1 
HETATM 14 C C13 YLJ . A . E 3 -16.798 -3.509 3.819 0.5 48.11 ? C13 YLJ 401 B 1 
HETATM 15 C C14 YLJ . A . E 3 -16.108 -2.093 3.749 0.5 41.73 ? C14 YLJ 401 B 1 
HETATM 16 C C19 YLJ . A . E 3 -16.995 -6.674 6.275 0.5 39.15 ? C19 YLJ 401 B 1 
HETATM 17 N N03 YLJ . A . E 3 -21.232 -5.189 2.162 0.5 42.43 ? N03 YLJ 401 B 1 
HETATM 18 N N10 YLJ . A . E 3 -18.671 -5.621 4.803 0.5 39.98 ? N10 YLJ 401 B 1 
HETATM 19 N N15 YLJ . A . E 3 -15.12 -2.083 2.698 0.5 48.56 ? N15 YLJ 401 B 1 
HETATM 20 O O01 YLJ . A . E 3 -20.261 -3.183 2.653 0.5 47.4 ? O01 YLJ 401 B 1 
HETATM 21 O O20 YLJ . A . E 3 -15.626 -6.88 6.473 0.5 37.1 ? O20 YLJ 401 B 1 
HETATM 22 O O21 YLJ . A . E 3 -18.903 -6.56 2.761 0.5 39.39 ? O21 YLJ 401 B 1 
HETATM 23 O O22 YLJ . A . E 3 -21.042 -3.341 0.516 0.5 59.98 ? O22 YLJ 401 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#