data_7M0T # _model_server_result.job_id slSyWGXlqkpLpKLV6dtSxg _model_server_result.datetime_utc '2024-11-29 04:14:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7M0T # _exptl.entry_id 7M0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 457.681 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(4-bromo-2-chlorophenyl)amino]-4-fluoro-N-(2-hydroxyethoxy)-1-methyl-1H-benzimidazole-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7M0T _cell.length_a 116.964 _cell.length_b 116.964 _cell.length_c 129.733 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 199 B ASN 195 1_555 E MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A OD2 ASP 212 B ASP 208 1_555 E MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc3 D O1B ANP . B ANP 402 1_555 E MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc4 D O2A ANP . B ANP 402 1_555 E MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc5 B OD1 ASN 141 A ASN 581 1_555 G MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc6 B OD2 ASP 154 A ASP 594 1_555 G MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc7 F O1B ANP . A ANP 801 1_555 G MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc8 F O1A ANP . A ANP 801 1_555 G MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? # _chem_comp.formula 'C17 H15 Br Cl F N4 O3' _chem_comp.formula_weight 457.681 _chem_comp.id 3EW _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(4-bromo-2-chlorophenyl)amino]-4-fluoro-N-(2-hydroxyethoxy)-1-methyl-1H-benzimidazole-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 N3 3EW sing 1 n n N3 C14 3EW sing 2 n y N3 C2 3EW sing 3 n y C14 N4 3EW doub 4 n y C2 C1 3EW doub 5 n y C2 C3 3EW sing 6 n y C15 O2 3EW sing 7 n n C15 C16 3EW sing 8 n n C1 C6 3EW sing 9 n y N4 C3 3EW sing 10 n y N2 O2 3EW sing 11 n n N2 C7 3EW sing 12 n n C3 C4 3EW doub 13 n y C16 O3 3EW sing 14 n n C6 C7 3EW sing 15 n n C6 C5 3EW doub 16 n y C7 O1 3EW doub 17 n n C4 C5 3EW sing 18 n y C4 F1 3EW sing 19 n n C5 N1 3EW sing 20 n n C9 C10 3EW doub 21 n y C9 C8 3EW sing 22 n y C10 C11 3EW sing 23 n y N1 C8 3EW sing 24 n n C8 C13 3EW doub 25 n y C11 BR1 3EW sing 26 n n C11 C12 3EW doub 27 n y C13 C12 3EW sing 28 n y C13 CL1 3EW sing 29 n n O3 H1 3EW sing 30 n n N1 H2 3EW sing 31 n n N2 H3 3EW sing 32 n n C9 H4 3EW sing 33 n n C10 H5 3EW sing 34 n n C12 H6 3EW sing 35 n n C14 H7 3EW sing 36 n n C15 H8 3EW sing 37 n n C15 H9 3EW sing 38 n n C17 H10 3EW sing 39 n n C17 H11 3EW sing 40 n n C17 H12 3EW sing 41 n n C1 H13 3EW sing 42 n n C16 H14 3EW sing 43 n n C16 H15 3EW sing 44 n n # _atom_sites.entry_id 7M0T _atom_sites.fract_transf_matrix[1][1] 0.00855 _atom_sites.fract_transf_matrix[1][2] 0.004936 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 3EW B 1 401 502 3EW 3EW . D 4 ANP B 1 402 801 ANP ANP . E 5 MG B 1 403 802 MG MG . F 4 ANP A 1 801 801 ANP ANP . G 5 MG A 1 802 802 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 3EW . . . C 3 59.023 -27.098 5.95 0.84 124.95 ? O3 3EW 401 B 1 HETATM 2 C C4 3EW . . . C 3 65.788 -23.801 3.898 0.84 112.21 ? C4 3EW 401 B 1 HETATM 3 C C5 3EW . . . C 3 64.981 -24.57 4.781 0.84 107.55 ? C5 3EW 401 B 1 HETATM 4 C C6 3EW . . . C 3 63.596 -24.245 4.834 0.84 112.11 ? C6 3EW 401 B 1 HETATM 5 N N1 3EW . . . C 3 65.509 -25.593 5.542 0.84 97.12 ? N1 3EW 401 B 1 HETATM 6 C C7 3EW . . . C 3 62.518 -24.917 5.66 0.84 113.62 ? C7 3EW 401 B 1 HETATM 7 C C8 3EW . . . C 3 66.606 -25.624 6.393 0.84 98.53 ? C8 3EW 401 B 1 HETATM 8 N N2 3EW . . . C 3 61.485 -24.211 6.147 0.84 117.42 ? N2 3EW 401 B 1 HETATM 9 C C9 3EW . . . C 3 67.659 -24.701 6.358 0.84 102.29 ? C9 3EW 401 B 1 HETATM 10 C C10 3EW . . . C 3 68.732 -24.744 7.231 0.84 105.93 ? C10 3EW 401 B 1 HETATM 11 C C11 3EW . . . C 3 68.797 -25.745 8.215 0.84 107.64 ? C11 3EW 401 B 1 HETATM 12 C C12 3EW . . . C 3 67.757 -26.681 8.282 0.84 101.11 ? C12 3EW 401 B 1 HETATM 13 N N3 3EW . . . C 3 63.648 -21.465 2.35 0.84 108.33 ? N3 3EW 401 B 1 HETATM 14 C C13 3EW . . . C 3 66.684 -26.612 7.384 0.84 101.1 ? C13 3EW 401 B 1 HETATM 15 C C14 3EW . . . C 3 64.801 -21.109 1.75 0.84 111.12 ? C14 3EW 401 B 1 HETATM 16 C C15 3EW . . . C 3 59.094 -24.751 6.562 0.84 123.86 ? C15 3EW 401 B 1 HETATM 17 N N4 3EW . . . C 3 65.804 -21.897 2.197 0.84 110.94 ? N4 3EW 401 B 1 HETATM 18 BR BR1 3EW . . . C 3 70.277 -25.825 9.426 0.84 131.49 ? BR1 3EW 401 B 1 HETATM 19 CL CL1 3EW . . . C 3 65.401 -27.849 7.572 0.84 110.93 ? CL1 3EW 401 B 1 HETATM 20 F F1 3EW . . . C 3 67.117 -24.007 3.752 0.84 108.24 ? F1 3EW 401 B 1 HETATM 21 C C3 3EW . . . C 3 65.262 -22.763 3.103 0.84 113.17 ? C3 3EW 401 B 1 HETATM 22 C C17 3EW . . . C 3 62.289 -20.888 2.186 0.84 107.38 ? C17 3EW 401 B 1 HETATM 23 C C2 3EW . . . C 3 63.914 -22.477 3.182 0.84 113.07 ? C2 3EW 401 B 1 HETATM 24 C C1 3EW . . . C 3 63.097 -23.219 4.038 0.84 114.71 ? C1 3EW 401 B 1 HETATM 25 O O1 3EW . . . C 3 62.563 -26.137 5.842 0.84 111.51 ? O1 3EW 401 B 1 HETATM 26 O O2 3EW . . . C 3 60.503 -24.849 6.89 0.84 122.51 ? O2 3EW 401 B 1 HETATM 27 C C16 3EW . . . C 3 58.359 -26.086 6.723 0.84 122.78 ? C16 3EW 401 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 638 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #