data_7M17 # _model_server_result.job_id 8eDLeGfT9VHH_p92utjYaw _model_server_result.datetime_utc '2024-11-04 22:48:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":902}' # _entry.id 7M17 # _exptl.entry_id 7M17 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 744.034 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M17 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 310 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 113 A CYS 113 1_555 A SG CYS 295 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 310 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 113 B CYS 113 1_555 B SG CYS 295 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 310 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 C SG CYS 113 C CYS 113 1_555 C SG CYS 295 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 310 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf12 D SG CYS 113 D CYS 113 1_555 D SG CYS 295 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 310 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf15 E SG CYS 113 E CYS 113 1_555 E SG CYS 295 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 310 F CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf17 F SG CYS 57 F CYS 57 1_555 F SG CYS 65 F CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf18 F SG CYS 113 F CYS 113 1_555 F SG CYS 295 F CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C41 H78 N O8 P' _chem_comp.formula_weight 744.034 _chem_comp.id PEE _chem_comp.mon_nstd_flag n _chem_comp.name 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # _atom_sites.entry_id 7M17 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PEE A 1 901 1 PEE DOP . H 2 PEE A 1 902 3 PEE DOP . I 2 PEE A 1 903 2 PEE DOP . J 2 PEE B 1 901 2 PEE DOP . K 2 PEE B 1 902 1 PEE DOP . L 2 PEE B 1 903 3 PEE DOP . M 2 PEE C 1 901 2 PEE DOP . N 3 YNJ C 1 902 1001 YNJ SM7 . O 2 PEE C 1 903 1 PEE DOP . P 2 PEE C 1 904 3 PEE DOP . Q 2 PEE D 1 901 2 PEE DOP . R 2 PEE D 1 902 1 PEE DOP . S 2 PEE D 1 903 3 PEE DOP . T 2 PEE E 1 901 2 PEE DOP . U 2 PEE E 1 902 1 PEE DOP . V 2 PEE E 1 903 3 PEE DOP . W 2 PEE F 1 901 2 PEE DOP . X 2 PEE F 1 902 1 PEE DOP . Y 2 PEE F 1 903 3 PEE DOP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 PEE . . . K 2 190.61 194.268 241.989 1 101.25 ? C27 PEE 902 B 1 HETATM 2 C C26 PEE . . . K 2 189.131 194.041 241.702 1 101.25 ? C26 PEE 902 B 1 HETATM 3 C C25 PEE . . . K 2 188.557 192.815 242.421 1 101.25 ? C25 PEE 902 B 1 HETATM 4 C C24 PEE . . . K 2 187.016 192.753 242.361 1 101.25 ? C24 PEE 902 B 1 HETATM 5 C C23 PEE . . . K 2 186.376 192.057 243.58 1 101.25 ? C23 PEE 902 B 1 HETATM 6 C C22 PEE . . . K 2 184.83 192.152 243.659 1 101.25 ? C22 PEE 902 B 1 HETATM 7 C C21 PEE . . . K 2 184.284 192.211 245.108 1 101.25 ? C21 PEE 902 B 1 HETATM 8 C C20 PEE . . . K 2 182.738 192.187 245.25 1 101.25 ? C20 PEE 902 B 1 HETATM 9 C C19 PEE . . . K 2 182.22 192.532 246.63 1 101.25 ? C19 PEE 902 B 1 HETATM 10 C C18 PEE . . . K 2 181.037 192.15 247.132 1 101.25 ? C18 PEE 902 B 1 HETATM 11 C C17 PEE . . . K 2 180.534 192.502 248.512 1 101.25 ? C17 PEE 902 B 1 HETATM 12 C C16 PEE . . . K 2 179.645 191.426 249.175 1 101.25 ? C16 PEE 902 B 1 HETATM 13 C C15 PEE . . . K 2 179.235 191.718 250.637 1 101.25 ? C15 PEE 902 B 1 HETATM 14 C C14 PEE . . . K 2 179.306 190.477 251.552 1 101.25 ? C14 PEE 902 B 1 HETATM 15 C C13 PEE . . . K 2 178.58 190.612 252.908 1 101.25 ? C13 PEE 902 B 1 HETATM 16 C C12 PEE . . . K 2 179.479 190.971 254.118 1 101.25 ? C12 PEE 902 B 1 HETATM 17 C C11 PEE . . . K 2 179.197 190.116 255.361 1 101.25 ? C11 PEE 902 B 1 HETATM 18 C C10 PEE . . . K 2 179.357 190.8 256.715 1 101.25 ? C10 PEE 902 B 1 HETATM 19 O O4 PEE . . . K 2 180.631 191.032 257.128 1 101.25 ? O4 PEE 902 B 1 HETATM 20 O O2 PEE . . . K 2 178.417 191.131 257.412 1 101.25 ? O2 PEE 902 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #