data_7M1T # _model_server_result.job_id y5etAOpH1wNWad4kT3aG-g _model_server_result.datetime_utc '2025-07-04 21:49:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 7M1T # _exptl.entry_id 7M1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M1T _cell.length_a 61.05 _cell.length_b 118.676 _cell.length_c 177.305 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 21 A SER 21 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc2 A OG SER 21 A SER 21 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc3 A OG SER 25 A SER 25 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc4 A OG SER 71 A SER 71 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc5 A O GLY 110 A GLY 110 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc6 A OE2 GLU 111 A GLU 111 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 J O1G ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc8 J O1B ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc9 J O1A ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc10 L MG MG . B MG 401 1_555 T O1B ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc11 L MG MG . B MG 401 1_555 T O3B ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc12 L MG MG . B MG 401 1_555 T O1A ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O2 UMQ sing 433 n n C2 C1 UMQ sing 434 n n C2 C3 UMQ sing 435 n n C2 H21 UMQ sing 436 n n C4 C5 UMQ sing 437 n n C4 O4 UMQ sing 438 n n C4 C3 UMQ sing 439 n n C4 H41 UMQ sing 440 n n C5 C6 UMQ sing 441 n n C5 O5 UMQ sing 442 n n C5 H51 UMQ sing 443 n n C6 O6 UMQ sing 444 n n C6 H61 UMQ sing 445 n n C6 H62 UMQ sing 446 n n O2 HO21 UMQ sing 447 n n O4 HO41 UMQ sing 448 n n C1 O1 UMQ sing 449 n n C1 O5 UMQ sing 450 n n C1 H11 UMQ sing 451 n n C3 O3 UMQ sing 452 n n C3 H31 UMQ sing 453 n n O1 C4' UMQ sing 454 n n O3 HO31 UMQ sing 455 n n O6 HO61 UMQ sing 456 n n C1' C2' UMQ sing 457 n n C1' O1' UMQ sing 458 n n C1' O5' UMQ sing 459 n n C1' "H1'1" UMQ sing 460 n n C2' C3' UMQ sing 461 n n C2' O2' UMQ sing 462 n n C2' "H2'1" UMQ sing 463 n n C3' C4' UMQ sing 464 n n C3' O3' UMQ sing 465 n n C3' "H3'1" UMQ sing 466 n n C4' C5' UMQ sing 467 n n C4' "H4'1" UMQ sing 468 n n C5' C6' UMQ sing 469 n n C5' O5' UMQ sing 470 n n C5' "H5'1" UMQ sing 471 n n C6' O6' UMQ sing 472 n n C6' "H6'1" UMQ sing 473 n n C6' "H6'2" UMQ sing 474 n n O1' CA UMQ sing 475 n n O3' HO3' UMQ sing 476 n n O6' HO6' UMQ sing 477 n n O2' HO2' UMQ sing 478 n n CA CB UMQ sing 479 n n CA HA1 UMQ sing 480 n n CA HA2 UMQ sing 481 n n CB CC UMQ sing 482 n n CB HB1 UMQ sing 483 n n CB HB2 UMQ sing 484 n n CC CD UMQ sing 485 n n CC HC1 UMQ sing 486 n n CC HC2 UMQ sing 487 n n CD CF UMQ sing 488 n n CD HD1 UMQ sing 489 n n CD HD2 UMQ sing 490 n n CF CG UMQ sing 491 n n CF HF1 UMQ sing 492 n n CF HF2 UMQ sing 493 n n CG CH UMQ sing 494 n n CG HG1 UMQ sing 495 n n CG HG2 UMQ sing 496 n n CH CI UMQ sing 497 n n CH HH1 UMQ sing 498 n n CH HH2 UMQ sing 499 n n CI CJ UMQ sing 500 n n CI HI1 UMQ sing 501 n n CI HI2 UMQ sing 502 n n CJ CK UMQ sing 503 n n CJ HJ1 UMQ sing 504 n n CJ HJ2 UMQ sing 505 n n CK CL UMQ sing 506 n n CK HK1 UMQ sing 507 n n CK HK2 UMQ sing 508 n n CL HL1 UMQ sing 509 n n CL HL2 UMQ sing 510 n n CL HL3 UMQ sing 511 n n # _atom_sites.entry_id 7M1T _atom_sites.fract_transf_matrix[1][1] 0.01638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 4 MG MG . D 3 SO4 A 1 402 2 SO4 SO4 . E 4 UMQ A 1 403 2 UMQ UMQ . F 4 UMQ A 1 404 3 UMQ UMQ . G 4 UMQ A 1 405 4 UMQ UMQ . H 4 UMQ A 1 406 5 UMQ UMQ . I 4 UMQ A 1 407 6 UMQ UMQ . J 5 ATP A 1 408 1 ATP ATP . K 6 1PE A 1 409 1 1PE 1PE . L 2 MG B 1 401 1 MG MG . M 2 MG B 1 402 2 MG MG . N 3 SO4 B 1 403 1 SO4 SO4 . O 4 UMQ B 1 404 1 UMQ UMQ . P 4 UMQ B 1 405 7 UMQ UMQ . Q 4 UMQ B 1 406 8 UMQ UMQ . R 4 UMQ B 1 407 9 UMQ UMQ . S 4 UMQ B 1 408 10 UMQ UMQ . T 5 ATP B 1 409 2 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CF UMQ . . . F 4 46.821 58.292 42.2 1 20.75 ? CF UMQ 404 A 1 HETATM 2 C CG UMQ . . . F 4 48.194 58.51 42.895 1 27.25 ? CG UMQ 404 A 1 HETATM 3 C CH UMQ . . . F 4 48.315 57.547 44.119 1 20.14 ? CH UMQ 404 A 1 HETATM 4 C CI UMQ . . . F 4 49.736 57.635 44.708 1 19.6 ? CI UMQ 404 A 1 HETATM 5 C CJ UMQ . . . F 4 49.978 56.417 45.635 1 21.03 ? CJ UMQ 404 A 1 HETATM 6 C CK UMQ . . . F 4 51.434 56.418 46.118 1 19.34 ? CK UMQ 404 A 1 HETATM 7 C CL UMQ . . . F 4 51.711 55.131 46.893 1 19.61 ? CL UMQ 404 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #