data_7M1T # _model_server_result.job_id FAOZ8WVttEsKyisJLNliEw _model_server_result.datetime_utc '2025-07-05 06:04:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 7M1T # _exptl.entry_id 7M1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M1T _cell.length_a 61.05 _cell.length_b 118.676 _cell.length_c 177.305 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 21 A SER 21 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc2 A OG SER 21 A SER 21 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc3 A OG SER 25 A SER 25 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc4 A OG SER 71 A SER 71 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc5 A O GLY 110 A GLY 110 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc6 A OE2 GLU 111 A GLU 111 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 J O1G ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc8 J O1B ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc9 J O1A ATP . A ATP 408 1_555 M MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc10 L MG MG . B MG 401 1_555 T O1B ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc11 L MG MG . B MG 401 1_555 T O3B ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc12 L MG MG . B MG 401 1_555 T O1A ATP . B ATP 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O2 UMQ sing 433 n n C2 C1 UMQ sing 434 n n C2 C3 UMQ sing 435 n n C2 H21 UMQ sing 436 n n C4 C5 UMQ sing 437 n n C4 O4 UMQ sing 438 n n C4 C3 UMQ sing 439 n n C4 H41 UMQ sing 440 n n C5 C6 UMQ sing 441 n n C5 O5 UMQ sing 442 n n C5 H51 UMQ sing 443 n n C6 O6 UMQ sing 444 n n C6 H61 UMQ sing 445 n n C6 H62 UMQ sing 446 n n O2 HO21 UMQ sing 447 n n O4 HO41 UMQ sing 448 n n C1 O1 UMQ sing 449 n n C1 O5 UMQ sing 450 n n C1 H11 UMQ sing 451 n n C3 O3 UMQ sing 452 n n C3 H31 UMQ sing 453 n n O1 C4' UMQ sing 454 n n O3 HO31 UMQ sing 455 n n O6 HO61 UMQ sing 456 n n C1' C2' UMQ sing 457 n n C1' O1' UMQ sing 458 n n C1' O5' UMQ sing 459 n n C1' "H1'1" UMQ sing 460 n n C2' C3' UMQ sing 461 n n C2' O2' UMQ sing 462 n n C2' "H2'1" UMQ sing 463 n n C3' C4' UMQ sing 464 n n C3' O3' UMQ sing 465 n n C3' "H3'1" UMQ sing 466 n n C4' C5' UMQ sing 467 n n C4' "H4'1" UMQ sing 468 n n C5' C6' UMQ sing 469 n n C5' O5' UMQ sing 470 n n C5' "H5'1" UMQ sing 471 n n C6' O6' UMQ sing 472 n n C6' "H6'1" UMQ sing 473 n n C6' "H6'2" UMQ sing 474 n n O1' CA UMQ sing 475 n n O3' HO3' UMQ sing 476 n n O6' HO6' UMQ sing 477 n n O2' HO2' UMQ sing 478 n n CA CB UMQ sing 479 n n CA HA1 UMQ sing 480 n n CA HA2 UMQ sing 481 n n CB CC UMQ sing 482 n n CB HB1 UMQ sing 483 n n CB HB2 UMQ sing 484 n n CC CD UMQ sing 485 n n CC HC1 UMQ sing 486 n n CC HC2 UMQ sing 487 n n CD CF UMQ sing 488 n n CD HD1 UMQ sing 489 n n CD HD2 UMQ sing 490 n n CF CG UMQ sing 491 n n CF HF1 UMQ sing 492 n n CF HF2 UMQ sing 493 n n CG CH UMQ sing 494 n n CG HG1 UMQ sing 495 n n CG HG2 UMQ sing 496 n n CH CI UMQ sing 497 n n CH HH1 UMQ sing 498 n n CH HH2 UMQ sing 499 n n CI CJ UMQ sing 500 n n CI HI1 UMQ sing 501 n n CI HI2 UMQ sing 502 n n CJ CK UMQ sing 503 n n CJ HJ1 UMQ sing 504 n n CJ HJ2 UMQ sing 505 n n CK CL UMQ sing 506 n n CK HK1 UMQ sing 507 n n CK HK2 UMQ sing 508 n n CL HL1 UMQ sing 509 n n CL HL2 UMQ sing 510 n n CL HL3 UMQ sing 511 n n # _atom_sites.entry_id 7M1T _atom_sites.fract_transf_matrix[1][1] 0.01638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 4 MG MG . D 3 SO4 A 1 402 2 SO4 SO4 . E 4 UMQ A 1 403 2 UMQ UMQ . F 4 UMQ A 1 404 3 UMQ UMQ . G 4 UMQ A 1 405 4 UMQ UMQ . H 4 UMQ A 1 406 5 UMQ UMQ . I 4 UMQ A 1 407 6 UMQ UMQ . J 5 ATP A 1 408 1 ATP ATP . K 6 1PE A 1 409 1 1PE 1PE . L 2 MG B 1 401 1 MG MG . M 2 MG B 1 402 2 MG MG . N 3 SO4 B 1 403 1 SO4 SO4 . O 4 UMQ B 1 404 1 UMQ UMQ . P 4 UMQ B 1 405 7 UMQ UMQ . Q 4 UMQ B 1 406 8 UMQ UMQ . R 4 UMQ B 1 407 9 UMQ UMQ . S 4 UMQ B 1 408 10 UMQ UMQ . T 5 ATP B 1 409 2 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UMQ . . . G 4 39.124 80.845 47.126 1 91.43 ? C2 UMQ 405 A 1 HETATM 2 C C4 UMQ . . . G 4 37.522 82.734 47.706 1 94.33 ? C4 UMQ 405 A 1 HETATM 3 C C5 UMQ . . . G 4 36.321 81.928 47.124 1 89.71 ? C5 UMQ 405 A 1 HETATM 4 C C6 UMQ . . . G 4 35.413 82.778 46.432 1 81.75 ? C6 UMQ 405 A 1 HETATM 5 O O2 UMQ . . . G 4 39.742 80.289 48.348 1 85.58 ? O2 UMQ 405 A 1 HETATM 6 O O4 UMQ . . . G 4 37.421 82.695 49.126 1 88.39 ? O4 UMQ 405 A 1 HETATM 7 C C1 UMQ . . . G 4 37.895 80.055 46.826 1 91.77 ? C1 UMQ 405 A 1 HETATM 8 C C3 UMQ . . . G 4 38.907 82.274 47.327 1 88.83 ? C3 UMQ 405 A 1 HETATM 9 O O1 UMQ . . . G 4 37.382 79.559 48.038 1 83.96 ? O1 UMQ 405 A 1 HETATM 10 O O3 UMQ . . . G 4 39.283 82.963 46.077 1 73.88 ? O3 UMQ 405 A 1 HETATM 11 O O5 UMQ . . . G 4 36.872 80.876 46.157 1 95.01 ? O5 UMQ 405 A 1 HETATM 12 O O6 UMQ . . . G 4 34.137 82.672 47.016 1 62.63 ? O6 UMQ 405 A 1 HETATM 13 C C1' UMQ . . . G 4 35.826 75.845 49.101 1 87.72 ? C1' UMQ 405 A 1 HETATM 14 C C2' UMQ . . . G 4 36.823 75.853 47.963 1 76.13 ? C2' UMQ 405 A 1 HETATM 15 C C3' UMQ . . . G 4 37.553 77.16 47.899 1 73.41 ? C3' UMQ 405 A 1 HETATM 16 C C4' UMQ . . . G 4 36.621 78.335 47.826 1 80.34 ? C4' UMQ 405 A 1 HETATM 17 C C5' UMQ . . . G 4 35.526 78.287 48.887 1 86.56 ? C5' UMQ 405 A 1 HETATM 18 C C6' UMQ . . . G 4 34.499 79.341 48.602 1 82.78 ? C6' UMQ 405 A 1 HETATM 19 O O1' UMQ . . . G 4 35.138 74.648 49.137 1 84.66 ? O1' UMQ 405 A 1 HETATM 20 O O3' UMQ . . . G 4 38.405 77.151 46.729 1 72.88 ? O3' UMQ 405 A 1 HETATM 21 O O5' UMQ . . . G 4 34.843 76.968 48.952 1 103.59 ? O5' UMQ 405 A 1 HETATM 22 O O6' UMQ . . . G 4 33.264 78.94 49.126 1 76.13 ? O6' UMQ 405 A 1 HETATM 23 O O2' UMQ . . . G 4 37.779 74.789 48.153 1 50.06 ? O2' UMQ 405 A 1 HETATM 24 C CA UMQ . . . G 4 34.415 74.448 50.36 1 46.68 ? CA UMQ 405 A 1 HETATM 25 C CB UMQ . . . G 4 33.745 73.027 50.373 1 38.8 ? CB UMQ 405 A 1 HETATM 26 C CC UMQ . . . G 4 34.681 71.989 49.694 1 30.54 ? CC UMQ 405 A 1 HETATM 27 C CF UMQ . . . G 4 34.125 68.246 54.5 1 19.05 ? CF UMQ 405 A 1 HETATM 28 C CG UMQ . . . G 4 33.429 68.764 55.801 1 21.91 ? CG UMQ 405 A 1 HETATM 29 C CH UMQ . . . G 4 33.536 67.756 56.968 1 18.99 ? CH UMQ 405 A 1 HETATM 30 C CI UMQ . . . G 4 34.765 66.817 56.843 1 18.76 ? CI UMQ 405 A 1 HETATM 31 C CJ UMQ . . . G 4 34.801 65.886 58.062 1 18.81 ? CJ UMQ 405 A 1 HETATM 32 C CK UMQ . . . G 4 36.24 65.718 58.541 1 18.21 ? CK UMQ 405 A 1 HETATM 33 H H21 UMQ . . . G 4 39.721 80.751 46.368 1 110.35 ? H21 UMQ 405 A 1 HETATM 34 H H41 UMQ . . . G 4 37.436 83.634 47.356 1 113.83 ? H41 UMQ 405 A 1 HETATM 35 H H51 UMQ . . . G 4 35.865 81.493 47.861 1 108.29 ? H51 UMQ 405 A 1 HETATM 36 H H61 UMQ . . . G 4 35.72 83.696 46.49 1 98.74 ? H61 UMQ 405 A 1 HETATM 37 H H62 UMQ . . . G 4 35.365 82.511 45.5 1 98.74 ? H62 UMQ 405 A 1 HETATM 38 H HO21 UMQ . . . G 4 40.559 80.109 48.194 1 103.34 ? HO21 UMQ 405 A 1 HETATM 39 H HO41 UMQ . . . G 4 37.503 83.482 49.437 1 106.7 ? HO41 UMQ 405 A 1 HETATM 40 H H11 UMQ . . . G 4 38.116 79.305 46.252 1 110.76 ? H11 UMQ 405 A 1 HETATM 41 H H31 UMQ . . . G 4 39.472 82.519 48.077 1 107.24 ? H31 UMQ 405 A 1 HETATM 42 H HO31 UMQ . . . G 4 39.954 83.463 46.224 1 89.3 ? HO31 UMQ 405 A 1 HETATM 43 H HO61 UMQ . . . G 4 33.635 83.289 46.717 1 75.79 ? HO61 UMQ 405 A 1 HETATM 44 H "H1'1" UMQ . . . G 4 36.31 75.928 49.938 1 105.91 ? "H1'1" UMQ 405 A 1 HETATM 45 H "H2'1" UMQ . . . G 4 36.357 75.697 47.127 1 92 ? "H2'1" UMQ 405 A 1 HETATM 46 H "H3'1" UMQ . . . G 4 38.1 77.257 48.694 1 88.74 ? "H3'1" UMQ 405 A 1 HETATM 47 H "H4'1" UMQ . . . G 4 36.214 78.34 46.945 1 97.05 ? "H4'1" UMQ 405 A 1 HETATM 48 H "H5'1" UMQ . . . G 4 35.94 78.469 49.745 1 104.51 ? "H5'1" UMQ 405 A 1 HETATM 49 H "H6'1" UMQ . . . G 4 34.42 79.464 47.643 1 99.98 ? "H6'1" UMQ 405 A 1 HETATM 50 H "H6'2" UMQ . . . G 4 34.77 80.176 49.013 1 99.98 ? "H6'2" UMQ 405 A 1 HETATM 51 H HO6' UMQ . . . G 4 32.771 79.622 49.242 1 92 ? HO6' UMQ 405 A 1 HETATM 52 H HO2' UMQ . . . G 4 37.908 74.389 47.414 1 60.72 ? HO2' UMQ 405 A 1 HETATM 53 H HA1 UMQ . . . G 4 35.028 74.519 51.108 1 56.66 ? HA1 UMQ 405 A 1 HETATM 54 H HA2 UMQ . . . G 4 33.727 75.127 50.439 1 56.66 ? HA2 UMQ 405 A 1 HETATM 55 H HB1 UMQ . . . G 4 32.904 73.065 49.89 1 47.2 ? HB1 UMQ 405 A 1 HETATM 56 H HB2 UMQ . . . G 4 33.58 72.759 51.29 1 47.2 ? HB2 UMQ 405 A 1 HETATM 57 H HC1 UMQ . . . G 4 34.619 72.079 48.731 1 37.29 ? HC1 UMQ 405 A 1 HETATM 58 H HC2 UMQ . . . G 4 35.596 72.144 49.977 1 37.29 ? HC2 UMQ 405 A 1 HETATM 59 H HF1 UMQ . . . G 4 33.835 67.341 54.307 1 22.51 ? HF1 UMQ 405 A 1 HETATM 60 H HF2 UMQ . . . G 4 35.089 68.267 54.611 1 22.51 ? HF2 UMQ 405 A 1 HETATM 61 H HG1 UMQ . . . G 4 33.849 69.596 56.069 1 26.93 ? HG1 UMQ 405 A 1 HETATM 62 H HG2 UMQ . . . G 4 32.491 68.922 55.611 1 26.93 ? HG2 UMQ 405 A 1 HETATM 63 H HH1 UMQ . . . G 4 33.608 68.251 57.799 1 20.1 ? HH1 UMQ 405 A 1 HETATM 64 H HH2 UMQ . . . G 4 32.732 67.214 56.983 1 20.1 ? HH2 UMQ 405 A 1 HETATM 65 H HI1 UMQ . . . G 4 34.691 66.29 56.032 1 19.31 ? HI1 UMQ 405 A 1 HETATM 66 H HI2 UMQ . . . G 4 35.577 67.346 56.812 1 19.31 ? HI2 UMQ 405 A 1 HETATM 67 H HJ1 UMQ . . . G 4 34.439 65.02 57.816 1 19.37 ? HJ1 UMQ 405 A 1 HETATM 68 H HJ2 UMQ . . . G 4 34.266 66.269 58.775 1 19.37 ? HJ2 UMQ 405 A 1 HETATM 69 H HK1 UMQ . . . G 4 36.579 66.572 58.853 1 18.65 ? HK1 UMQ 405 A 1 HETATM 70 H HK2 UMQ . . . G 4 36.79 65.399 57.809 1 18.65 ? HK2 UMQ 405 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 70 #