data_7M20
#
_model_server_result.job_id            NMYCx8IZWam9zBiuK5DWvw 
_model_server_result.datetime_utc      '2025-01-02 17:47:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7m20 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"PA","auth_seq_id":502}' 
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_entry.id    7M20 
#
_exptl.entry_id    7M20 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 U N N 
? 5 X N N 
? 5 AA N N 
? 5 DA N N 
? 5 GA N N 
? 5 JA N N 
? 5 MA N N 
? 5 PA N N 
? 5 SA N N 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 174 n n 
PG O2G GTP sing 175 n n 
PG O3G GTP sing 176 n n 
PG O3B GTP sing 177 n n 
O2G HOG2 GTP sing 178 n n 
O3G HOG3 GTP sing 179 n n 
O3B PB GTP sing 180 n n 
PB O1B GTP doub 181 n n 
PB O2B GTP sing 182 n n 
PB O3A GTP sing 183 n n 
O2B HOB2 GTP sing 184 n n 
O3A PA GTP sing 185 n n 
PA O1A GTP doub 186 n n 
PA O2A GTP sing 187 n n 
PA O5' GTP sing 188 n n 
O2A HOA2 GTP sing 189 n n 
O5' C5' GTP sing 190 n n 
C5' C4' GTP sing 191 n n 
C5' H5' GTP sing 192 n n 
C5' "H5''" GTP sing 193 n n 
C4' O4' GTP sing 194 n n 
C4' C3' GTP sing 195 n n 
C4' H4' GTP sing 196 n n 
O4' C1' GTP sing 197 n n 
C3' O3' GTP sing 198 n n 
C3' C2' GTP sing 199 n n 
C3' H3' GTP sing 200 n n 
O3' HO3' GTP sing 201 n n 
C2' O2' GTP sing 202 n n 
C2' C1' GTP sing 203 n n 
C2' H2' GTP sing 204 n n 
O2' HO2' GTP sing 205 n n 
C1' N9 GTP sing 206 n n 
C1' H1' GTP sing 207 n n 
N9 C8 GTP sing 208 n y 
N9 C4 GTP sing 209 n y 
C8 N7 GTP doub 210 n y 
C8 H8 GTP sing 211 n n 
N7 C5 GTP sing 212 n y 
C5 C6 GTP sing 213 n n 
C5 C4 GTP doub 214 n y 
C6 O6 GTP doub 215 n n 
C6 N1 GTP sing 216 n n 
N1 C2 GTP sing 217 n n 
N1 HN1 GTP sing 218 n n 
C2 N2 GTP sing 219 n n 
C2 N3 GTP doub 220 n n 
N2 HN21 GTP sing 221 n n 
N2 HN22 GTP sing 222 n n 
N3 C4 GTP sing 223 n n 
#
_atom_sites.entry_id                     7M20 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 3 GDP B 1 1101 1101 GDP GDP . 
T 4 YNP A 1 501 1102 YNP YNP . 
U 5 GTP A 1 502 601 GTP GTP . 
V 3 GDP D 1 1101 1101 GDP GDP . 
W 4 YNP C 1 501 1102 YNP YNP . 
X 5 GTP C 1 502 601 GTP GTP . 
Y 3 GDP F 1 1101 1101 GDP GDP . 
Z 4 YNP E 1 501 1102 YNP YNP . 
AA 5 GTP E 1 502 601 GTP GTP . 
BA 3 GDP H 1 1101 1101 GDP GDP . 
CA 4 YNP G 1 501 1102 YNP YNP . 
DA 5 GTP G 1 502 601 GTP GTP . 
EA 3 GDP J 1 1101 1101 GDP GDP . 
FA 4 YNP I 1 501 1102 YNP YNP . 
GA 5 GTP I 1 502 601 GTP GTP . 
HA 3 GDP L 1 1101 1101 GDP GDP . 
IA 4 YNP K 1 501 1102 YNP YNP . 
JA 5 GTP K 1 502 601 GTP GTP . 
KA 3 GDP N 1 1101 1101 GDP GDP . 
LA 4 YNP M 1 501 1102 YNP YNP . 
MA 5 GTP M 1 502 601 GTP GTP . 
NA 3 GDP P 1 1101 1101 GDP GDP . 
OA 4 YNP O 1 501 1102 YNP YNP . 
PA 5 GTP O 1 502 601 GTP GTP . 
QA 3 GDP R 1 1101 1101 GDP GDP . 
RA 4 YNP Q 1 501 1102 YNP YNP . 
SA 5 GTP Q 1 502 601 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . PA 5 396.67 214.213 326.411 1 119.97 ? PG GTP 502 O 1 
HETATM 2 O O1G GTP . . . PA 5 398.099 214.666 326.339 1 119.97 ? O1G GTP 502 O 1 
HETATM 3 O O2G GTP . . . PA 5 396.261 213.797 327.8 1 119.97 ? O2G GTP 502 O 1 
HETATM 4 O O3G GTP . . . PA 5 396.337 213.178 325.368 1 119.97 ? O3G GTP 502 O 1 
HETATM 5 O O3B GTP . . . PA 5 395.794 215.504 326.034 1 119.97 ? O3B GTP 502 O 1 
HETATM 6 P PB GTP . . . PA 5 395.394 216.052 324.59 1 119.97 ? PB GTP 502 O 1 
HETATM 7 O O1B GTP . . . PA 5 395.291 217.532 324.653 1 119.97 ? O1B GTP 502 O 1 
HETATM 8 O O2B GTP . . . PA 5 394.251 215.256 324.063 1 119.97 ? O2B GTP 502 O 1 
HETATM 9 O O3A GTP . . . PA 5 396.709 215.676 323.765 1 119.97 ? O3A GTP 502 O 1 
HETATM 10 P PA GTP . . . PA 5 398.073 216.493 323.622 1 119.97 ? PA GTP 502 O 1 
HETATM 11 O O1A GTP . . . PA 5 398.318 217.187 324.917 1 119.97 ? O1A GTP 502 O 1 
HETATM 12 O O2A GTP . . . PA 5 398.015 217.317 322.383 1 119.97 ? O2A GTP 502 O 1 
HETATM 13 O O5' GTP . . . PA 5 399.133 215.309 323.431 1 119.97 ? O5' GTP 502 O 1 
HETATM 14 C C5' GTP . . . PA 5 399.027 214.459 322.264 1 119.97 ? C5' GTP 502 O 1 
HETATM 15 C C4' GTP . . . PA 5 399.552 215.204 321.066 1 119.97 ? C4' GTP 502 O 1 
HETATM 16 O O4' GTP . . . PA 5 400.747 214.573 320.552 1 119.97 ? O4' GTP 502 O 1 
HETATM 17 C C3' GTP . . . PA 5 398.615 215.32 319.854 1 119.97 ? C3' GTP 502 O 1 
HETATM 18 O O3' GTP . . . PA 5 398.127 216.649 319.761 1 119.97 ? O3' GTP 502 O 1 
HETATM 19 C C2' GTP . . . PA 5 399.502 214.978 318.649 1 119.97 ? C2' GTP 502 O 1 
HETATM 20 O O2' GTP . . . PA 5 399.355 215.901 317.594 1 119.97 ? O2' GTP 502 O 1 
HETATM 21 C C1' GTP . . . PA 5 400.887 215.107 319.265 1 119.97 ? C1' GTP 502 O 1 
HETATM 22 N N9 GTP . . . PA 5 401.974 214.482 318.527 1 119.97 ? N9 GTP 502 O 1 
HETATM 23 C C8 GTP . . . PA 5 402.075 214.43 317.162 1 119.97 ? C8 GTP 502 O 1 
HETATM 24 N N7 GTP . . . PA 5 403.185 213.876 316.746 1 119.97 ? N7 GTP 502 O 1 
HETATM 25 C C5 GTP . . . PA 5 403.875 213.574 317.911 1 119.97 ? C5 GTP 502 O 1 
HETATM 26 C C6 GTP . . . PA 5 405.145 212.97 318.081 1 119.97 ? C6 GTP 502 O 1 
HETATM 27 O O6 GTP . . . PA 5 405.939 212.6 317.208 1 119.97 ? O6 GTP 502 O 1 
HETATM 28 N N1 GTP . . . PA 5 405.48 212.854 319.428 1 119.97 ? N1 GTP 502 O 1 
HETATM 29 C C2 GTP . . . PA 5 404.684 213.243 320.474 1 119.97 ? C2 GTP 502 O 1 
HETATM 30 N N2 GTP . . . PA 5 405.174 213.032 321.701 1 119.97 ? N2 GTP 502 O 1 
HETATM 31 N N3 GTP . . . PA 5 403.486 213.807 320.321 1 119.97 ? N3 GTP 502 O 1 
HETATM 32 C C4 GTP . . . PA 5 403.145 213.946 319.018 1 119.97 ? C4 GTP 502 O 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    251 
_model_server_stats.query_time_ms           417 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           32 
#