data_7M2I
#
_model_server_result.job_id            tnvmDuAK2w6uxGAviZ9quA 
_model_server_result.datetime_utc      '2024-11-24 14:46:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7m2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    7M2I 
#
_exptl.entry_id    7M2I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              442.672 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S)-2-HYDROXY-1-[(NONANOYLOXY)METHYL]ETHYL MYRISTATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7M2I 
_cell.length_a            155.25 
_cell.length_b            155.25 
_cell.length_c            74.415 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7M2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 145 A CYS 145 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 C SG CYS 3 C CYS 28 1_555 C SG CYS 93 C CYS 118 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 C O THR 50 C THR 75 1_555 G K K . C K 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? 
metalc ? metalc2 C OG1 THR 50 C THR 75 1_555 G K K . C K 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? 
metalc ? metalc3 C O THR 50 C THR 75 1_555 G K K . C K 203 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? 
metalc ? metalc4 C OG1 THR 50 C THR 75 1_555 G K K . C K 203 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? 
metalc ? metalc5 C O THR 50 C THR 75 1_555 K K K . C K 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.131 ? 
metalc ? metalc6 C O THR 50 C THR 75 1_555 K K K . C K 207 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.131 ? 
metalc ? metalc7 C O VAL 51 C VAL 76 1_555 K K K . C K 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? 
metalc ? metalc8 C O VAL 51 C VAL 76 1_555 K K K . C K 207 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? 
metalc ? metalc9 C O GLY 52 C GLY 77 1_555 H K K . C K 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? 
metalc ? metalc10 C O GLY 52 C GLY 77 1_555 H K K . C K 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? 
metalc ? metalc11 C O TYR 53 C TYR 78 1_555 H K K . C K 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc12 C O TYR 53 C TYR 78 1_555 H K K . C K 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc13 F K K . C K 202 1_555 N O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? 
metalc ? metalc14 F K K . C K 202 1_555 N O HOH . C HOH 302 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? 
metalc ? metalc15 J K K . C K 206 1_555 N O HOH . C HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? 
metalc ? metalc16 J K K . C K 206 1_555 N O HOH . C HOH 304 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? 
#
_chem_comp.formula           'C26 H50 O5' 
_chem_comp.formula_weight    442.672 
_chem_comp.id                1EM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S)-2-HYDROXY-1-[(NONANOYLOXY)METHYL]ETHYL MYRISTATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O11 C11 1EM doub 1 n n 
C11 C12 1EM sing 2 n n 
C11 O41 1EM sing 3 n n 
C12 C13 1EM sing 4 n n 
C12 H121 1EM sing 5 n n 
C12 H122 1EM sing 6 n n 
C13 C14 1EM sing 7 n n 
C13 H131 1EM sing 8 n n 
C13 H132 1EM sing 9 n n 
C14 C15 1EM sing 10 n n 
C14 H141 1EM sing 11 n n 
C14 H142 1EM sing 12 n n 
C15 C16 1EM sing 13 n n 
C15 H151 1EM sing 14 n n 
C15 H152 1EM sing 15 n n 
C16 C17 1EM sing 16 n n 
C16 H161 1EM sing 17 n n 
C16 H162 1EM sing 18 n n 
C17 C18 1EM sing 19 n n 
C17 H171 1EM sing 20 n n 
C17 H172 1EM sing 21 n n 
C18 C19 1EM sing 22 n n 
C18 H181 1EM sing 23 n n 
C18 H182 1EM sing 24 n n 
C19 H191 1EM sing 25 n n 
C19 H192 1EM sing 26 n n 
C19 H193 1EM sing 27 n n 
O21 C21 1EM doub 28 n n 
C21 C22 1EM sing 29 n n 
C21 O42 1EM sing 30 n n 
C22 C23 1EM sing 31 n n 
C22 H221 1EM sing 32 n n 
C22 H222 1EM sing 33 n n 
C23 C24 1EM sing 34 n n 
C23 H231 1EM sing 35 n n 
C23 H232 1EM sing 36 n n 
C24 C25 1EM sing 37 n n 
C24 H241 1EM sing 38 n n 
C24 H242 1EM sing 39 n n 
C25 C26 1EM sing 40 n n 
C25 H251 1EM sing 41 n n 
C25 H252 1EM sing 42 n n 
C26 C27 1EM sing 43 n n 
C26 H261 1EM sing 44 n n 
C26 H262 1EM sing 45 n n 
C27 C28 1EM sing 46 n n 
C27 H271 1EM sing 47 n n 
C27 H272 1EM sing 48 n n 
C28 C29 1EM sing 49 n n 
C28 H281 1EM sing 50 n n 
C28 H282 1EM sing 51 n n 
C29 C30 1EM sing 52 n n 
C29 H291 1EM sing 53 n n 
C29 H292 1EM sing 54 n n 
C30 C31 1EM sing 55 n n 
C30 H301 1EM sing 56 n n 
C30 H302 1EM sing 57 n n 
C31 C32 1EM sing 58 n n 
C31 H311 1EM sing 59 n n 
C31 H312 1EM sing 60 n n 
C32 C33 1EM sing 61 n n 
C32 H321 1EM sing 62 n n 
C32 H322 1EM sing 63 n n 
C33 C34 1EM sing 64 n n 
C33 H331 1EM sing 65 n n 
C33 H332 1EM sing 66 n n 
C34 H341 1EM sing 67 n n 
C34 H342 1EM sing 68 n n 
C34 H343 1EM sing 69 n n 
C41 O41 1EM sing 70 n n 
C41 C42 1EM sing 71 n n 
C41 H411 1EM sing 72 n n 
C41 H412 1EM sing 73 n n 
C42 O42 1EM sing 74 n n 
C42 C43 1EM sing 75 n n 
C42 H42 1EM sing 76 n n 
C43 O43 1EM sing 77 n n 
C43 H431 1EM sing 78 n n 
C43 H432 1EM sing 79 n n 
O43 HO43 1EM sing 80 n n 
#
_atom_sites.entry_id                     7M2I 
_atom_sites.fract_transf_matrix[1][1]    0.006441 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006441 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013438 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 F09 A 1 2001 2001 F09 F09 . 
E 5 1EM C 1 201 2002 1EM 1EM . 
F 6 K C 1 202 1 K K . 
G 6 K C 1 203 2 K K . 
H 6 K C 1 204 3 K K . 
I 6 K C 1 205 4 K K . 
J 6 K C 1 206 5 K K . 
K 6 K C 1 207 6 K K . 
L 7 HOH A 1 2101 14 HOH HOH . 
L 7 HOH A 2 2102 15 HOH HOH . 
L 7 HOH A 3 2103 10 HOH HOH . 
L 7 HOH A 4 2104 48 HOH HOH . 
L 7 HOH A 5 2105 5 HOH HOH . 
L 7 HOH A 6 2106 9 HOH HOH . 
L 7 HOH A 7 2107 7 HOH HOH . 
L 7 HOH A 8 2108 12 HOH HOH . 
L 7 HOH A 9 2109 4 HOH HOH . 
L 7 HOH A 10 2110 44 HOH HOH . 
L 7 HOH A 11 2111 3 HOH HOH . 
L 7 HOH A 12 2112 49 HOH HOH . 
M 7 HOH B 1 301 16 HOH HOH . 
M 7 HOH B 2 302 47 HOH HOH . 
M 7 HOH B 3 303 19 HOH HOH . 
M 7 HOH B 4 304 20 HOH HOH . 
M 7 HOH B 5 305 17 HOH HOH . 
M 7 HOH B 6 306 18 HOH HOH . 
M 7 HOH B 7 307 46 HOH HOH . 
M 7 HOH B 8 308 28 HOH HOH . 
N 7 HOH C 1 301 43 HOH HOH . 
N 7 HOH C 2 302 42 HOH HOH . 
N 7 HOH C 3 303 32 HOH HOH . 
N 7 HOH C 4 304 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O11 1EM . . . E 5 10.605 15.596 -6.545 1 88.83 ? O11 1EM 201 C 1 
HETATM 2 C C11 1EM . . . E 5 9.788 16.415 -6.297 1 75.67 ? C11 1EM 201 C 1 
HETATM 3 C C12 1EM . . . E 5 9.24 16.459 -4.903 1 67.99 ? C12 1EM 201 C 1 
HETATM 4 C C13 1EM . . . E 5 10.367 16.501 -3.894 1 61.76 ? C13 1EM 201 C 1 
HETATM 5 C C14 1EM . . . E 5 10.302 15.355 -2.909 1 54.51 ? C14 1EM 201 C 1 
HETATM 6 C C15 1EM . . . E 5 9.205 15.546 -1.897 1 46.01 ? C15 1EM 201 C 1 
HETATM 7 C C16 1EM . . . E 5 9.813 15.831 -0.553 1 56.36 ? C16 1EM 201 C 1 
HETATM 8 C C17 1EM . . . E 5 9.379 14.846 0.504 1 53.8 ? C17 1EM 201 C 1 
HETATM 9 C C18 1EM . . . E 5 9.417 15.577 1.825 1 75.3 ? C18 1EM 201 C 1 
HETATM 10 C C19 1EM . . . E 5 9.746 14.659 2.966 1 67.12 ? C19 1EM 201 C 1 
HETATM 11 O O21 1EM . . . E 5 11.843 19.851 -10.44 1 115.48 ? O21 1EM 201 C 1 
HETATM 12 C C21 1EM . . . E 5 11.737 18.848 -9.744 1 118.54 ? C21 1EM 201 C 1 
HETATM 13 C C22 1EM . . . E 5 12.578 18.694 -8.499 1 93.68 ? C22 1EM 201 C 1 
HETATM 14 C C23 1EM . . . E 5 12.114 19.606 -7.372 1 83.41 ? C23 1EM 201 C 1 
HETATM 15 C C24 1EM . . . E 5 13.31 20.126 -6.595 1 89.48 ? C24 1EM 201 C 1 
HETATM 16 C C25 1EM . . . E 5 13.208 19.841 -5.107 1 92.23 ? C25 1EM 201 C 1 
HETATM 17 C C26 1EM . . . E 5 14.578 19.598 -4.5 1 88.48 ? C26 1EM 201 C 1 
HETATM 18 C C27 1EM . . . E 5 14.513 18.609 -3.346 1 91.94 ? C27 1EM 201 C 1 
HETATM 19 C C28 1EM . . . E 5 15.83 17.852 -3.193 1 86.5 ? C28 1EM 201 C 1 
HETATM 20 C C29 1EM . . . E 5 15.672 16.465 -2.574 1 77.81 ? C29 1EM 201 C 1 
HETATM 21 C C30 1EM . . . E 5 17.026 15.779 -2.415 1 85.81 ? C30 1EM 201 C 1 
HETATM 22 C C31 1EM . . . E 5 16.93 14.525 -1.558 1 61.28 ? C31 1EM 201 C 1 
HETATM 23 C C32 1EM . . . E 5 18.204 13.691 -1.539 1 69.49 ? C32 1EM 201 C 1 
HETATM 24 C C33 1EM . . . E 5 19.429 14.578 -1.457 1 78.34 ? C33 1EM 201 C 1 
HETATM 25 C C34 1EM . . . E 5 20.698 13.77 -1.55 1 61.27 ? C34 1EM 201 C 1 
HETATM 26 C C41 1EM . . . E 5 9.254 16.742 -8.679 1 74.27 ? C41 1EM 201 C 1 
HETATM 27 O O41 1EM . . . E 5 9.4 17.286 -7.38 1 84.85 ? O41 1EM 201 C 1 
HETATM 28 C C42 1EM . . . E 5 9.463 17.841 -9.695 1 103.55 ? C42 1EM 201 C 1 
HETATM 29 O O42 1EM . . . E 5 10.817 17.774 -10.15 1 130.37 ? O42 1EM 201 C 1 
HETATM 30 C C43 1EM . . . E 5 8.534 17.593 -10.872 1 87.47 ? C43 1EM 201 C 1 
HETATM 31 O O43 1EM . . . E 5 8.723 16.265 -11.337 1 69.82 ? O43 1EM 201 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#