data_7M33 # _model_server_result.job_id ITAJiJrgx0KQn3EMMacTOg _model_server_result.datetime_utc '2024-12-03 00:14:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 7M33 # _exptl.entry_id 7M33 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M33 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 F N N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 7M33 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP C 1 801 801 ATP ATP . D 4 HT1 C 1 802 601 HT1 HT1 . E 4 HT1 C 1 803 602 HT1 HT1 . F 3 ATP D 1 701 802 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . C 3 147.222 97.524 136.639 1 92.63 ? PG ATP 801 C 1 HETATM 2 O O1G ATP . . . C 3 147.416 96.224 135.904 1 92.63 ? O1G ATP 801 C 1 HETATM 3 O O2G ATP . . . C 3 147.993 98.656 136.019 1 92.63 ? O2G ATP 801 C 1 HETATM 4 O O3G ATP . . . C 3 145.799 97.843 137.02 1 92.63 ? O3G ATP 801 C 1 HETATM 5 P PB ATP . . . C 3 148.815 95.976 138.297 1 92.63 ? PB ATP 801 C 1 HETATM 6 O O1B ATP . . . C 3 147.878 94.846 138.642 1 92.63 ? O1B ATP 801 C 1 HETATM 7 O O2B ATP . . . C 3 149.798 95.851 137.161 1 92.63 ? O2B ATP 801 C 1 HETATM 8 O O3B ATP . . . C 3 147.942 97.297 138.054 1 92.63 ? O3B ATP 801 C 1 HETATM 9 P PA ATP . . . C 3 150.972 97.282 139.56 1 92.63 ? PA ATP 801 C 1 HETATM 10 O O1A ATP . . . C 3 152.107 96.483 138.973 1 92.63 ? O1A ATP 801 C 1 HETATM 11 O O2A ATP . . . C 3 150.579 98.623 138.994 1 92.63 ? O2A ATP 801 C 1 HETATM 12 O O3A ATP . . . C 3 149.655 96.374 139.601 1 92.63 ? O3A ATP 801 C 1 HETATM 13 O O5' ATP . . . C 3 151.215 97.437 141.142 1 92.63 ? O5' ATP 801 C 1 HETATM 14 C C5' ATP . . . C 3 150.36 98.269 141.929 1 92.63 ? C5' ATP 801 C 1 HETATM 15 C C4' ATP . . . C 3 150.935 98.402 143.335 1 92.63 ? C4' ATP 801 C 1 HETATM 16 O O4' ATP . . . C 3 152.371 98.455 143.235 1 92.63 ? O4' ATP 801 C 1 HETATM 17 C C3' ATP . . . C 3 150.546 99.693 144.049 1 92.63 ? C3' ATP 801 C 1 HETATM 18 O O3' ATP . . . C 3 149.295 99.59 144.739 1 92.63 ? O3' ATP 801 C 1 HETATM 19 C C2' ATP . . . C 3 151.759 99.903 144.931 1 92.63 ? C2' ATP 801 C 1 HETATM 20 O O2' ATP . . . C 3 151.824 99.058 146.091 1 92.63 ? O2' ATP 801 C 1 HETATM 21 C C1' ATP . . . C 3 152.906 99.54 144.004 1 92.63 ? C1' ATP 801 C 1 HETATM 22 N N9 ATP . . . C 3 153.221 100.652 143.079 1 92.63 ? N9 ATP 801 C 1 HETATM 23 C C8 ATP . . . C 3 152.948 100.714 141.76 1 92.63 ? C8 ATP 801 C 1 HETATM 24 N N7 ATP . . . C 3 153.381 101.881 141.229 1 92.63 ? N7 ATP 801 C 1 HETATM 25 C C5 ATP . . . C 3 153.932 102.594 142.221 1 92.63 ? C5 ATP 801 C 1 HETATM 26 C C6 ATP . . . C 3 154.571 103.918 142.342 1 92.63 ? C6 ATP 801 C 1 HETATM 27 N N6 ATP . . . C 3 154.689 104.7 141.246 1 92.63 ? N6 ATP 801 C 1 HETATM 28 N N1 ATP . . . C 3 155.017 104.294 143.559 1 92.63 ? N1 ATP 801 C 1 HETATM 29 C C2 ATP . . . C 3 154.887 103.497 144.637 1 92.63 ? C2 ATP 801 C 1 HETATM 30 N N3 ATP . . . C 3 154.314 102.282 144.592 1 92.63 ? N3 ATP 801 C 1 HETATM 31 C C4 ATP . . . C 3 153.832 101.782 143.433 1 92.63 ? C4 ATP 801 C 1 HETATM 32 H "H5'1" ATP . . . C 3 150.276 99.254 141.465 1 92.63 ? "H5'1" ATP 801 C 1 HETATM 33 H "H5'2" ATP . . . C 3 149.361 97.83 141.979 1 92.63 ? "H5'2" ATP 801 C 1 HETATM 34 H H4' ATP . . . C 3 150.623 97.54 143.942 1 92.63 ? H4' ATP 801 C 1 HETATM 35 H H3' ATP . . . C 3 150.501 100.508 143.313 1 92.63 ? H3' ATP 801 C 1 HETATM 36 H HO3' ATP . . . C 3 149.096 100.431 145.173 1 92.63 ? HO3' ATP 801 C 1 HETATM 37 H H2' ATP . . . C 3 151.832 100.962 145.214 1 92.63 ? H2' ATP 801 C 1 HETATM 38 H HO2' ATP . . . C 3 151.06 99.23 146.658 1 92.63 ? HO2' ATP 801 C 1 HETATM 39 H H1' ATP . . . C 3 153.786 99.229 144.584 1 92.63 ? H1' ATP 801 C 1 HETATM 40 H H8 ATP . . . C 3 152.463 99.927 141.196 1 92.63 ? H8 ATP 801 C 1 HETATM 41 H HN61 ATP . . . C 3 155.127 105.607 141.317 1 92.63 ? HN61 ATP 801 C 1 HETATM 42 H HN62 ATP . . . C 3 154.341 104.376 140.355 1 92.63 ? HN62 ATP 801 C 1 HETATM 43 H H2 ATP . . . C 3 155.266 103.852 145.588 1 92.63 ? H2 ATP 801 C 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #